RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
NF1-221ENST00000581790 PTGER2P43116 358 aa11.48□□□□□ -0.57
NF1-221ENST00000581790 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
NF1-221ENST00000581790 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
NF1-221ENST00000581790 SCRIBQ14160 1630 aa11.48□□□□□ -0.57
NF1-221ENST00000581790 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.57
NF1-221ENST00000581790 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
NF1-221ENST00000581790 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
NF1-221ENST00000581790 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
NF1-221ENST00000581790 UNC13AQ9UPW8 1703 aa11.36□□□□□ -0.59
NF1-221ENST00000581790 ARSIQ5FYB1 569 aa11.35□□□□□ -0.59
NF1-221ENST00000581790 MS4A4AQ96JQ5 239 aa11.35□□□□□ -0.59
NF1-221ENST00000581790 SUPT5HO00267 1087 aaKnown RBP11.34□□□□□ -0.59
NF1-221ENST00000581790 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
NF1-221ENST00000581790 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
NF1-221ENST00000581790 ZNF316A6NFI3 1004 aaPredicted RBP11.32□□□□□ -0.6
NF1-221ENST00000581790 SOX12O15370 315 aa11.32□□□□□ -0.6
NF1-221ENST00000581790 KHSRPQ92945 711 aaKnown RBP eCLIP11.3□□□□□ -0.6
NF1-221ENST00000581790 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
NF1-221ENST00000581790 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
NF1-221ENST00000581790 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
NF1-221ENST00000581790 PBX2P40425 430 aa11.23□□□□□ -0.61
NF1-221ENST00000581790 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
NF1-221ENST00000581790 RNF25Q96BH1 459 aaPredicted RBP11.22□□□□□ -0.61
NF1-221ENST00000581790 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
NF1-221ENST00000581790 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
NF1-221ENST00000581790 NUDT7P0C024 238 aa11.18□□□□□ -0.62
NF1-221ENST00000581790 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
NF1-221ENST00000581790 HCSTQ9UBK5 93 aa11.16□□□□□ -0.62
NF1-221ENST00000581790 AXIN2Q9Y2T1 843 aa11.15□□□□□ -0.62
NF1-221ENST00000581790 NLRP6P59044 892 aa11.14□□□□□ -0.63
NF1-221ENST00000581790 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
NF1-221ENST00000581790 KIF3CO14782 793 aa11.13□□□□□ -0.63
NF1-221ENST00000581790 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
NF1-221ENST00000581790 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
NF1-221ENST00000581790 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
NF1-221ENST00000581790 PCDHGA4Q9Y5G9 962 aa11.09□□□□□ -0.63
NF1-221ENST00000581790 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
NF1-221ENST00000581790 BAZ1AQ9NRL2 1556 aaPredicted RBP11.07□□□□□ -0.64
NF1-221ENST00000581790 SLC34A2O95436 690 aa11.07□□□□□ -0.64
NF1-221ENST00000581790 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
NF1-221ENST00000581790 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
NF1-221ENST00000581790 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
NF1-221ENST00000581790 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
NF1-221ENST00000581790 MFRPQ9BY79 579 aa11.04□□□□□ -0.64
NF1-221ENST00000581790 WIZO95785 1651 aa11.04□□□□□ -0.64
NF1-221ENST00000581790 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
NF1-221ENST00000581790 SMARCA4P51532 1647 aa11.02□□□□□ -0.64
NF1-221ENST00000581790 HRO43593 1189 aa10.99□□□□□ -0.65
NF1-221ENST00000581790 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
NF1-221ENST00000581790 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
NF1-221ENST00000581790 TK2O00142 265 aa10.98□□□□□ -0.65
NF1-221ENST00000581790 TMC2Q8TDI7 906 aa10.97□□□□□ -0.65
NF1-221ENST00000581790 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.65
NF1-221ENST00000581790 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
NF1-221ENST00000581790 KDM4FA0A1W2PPD8 638 aa10.93□□□□□ -0.66
NF1-221ENST00000581790 PSEN2P49810 448 aa10.93□□□□□ -0.66
NF1-221ENST00000581790 KCTD12Q96CX2 325 aaKnown RBP10.93□□□□□ -0.66
NF1-221ENST00000581790 TOP2AP11388 1531 aaKnown RBP10.9□□□□□ -0.66
NF1-221ENST00000581790 STK25O00506 426 aa10.9□□□□□ -0.66
NF1-221ENST00000581790 PTCD2Q8WV60 388 aaKnown RBP10.87□□□□□ -0.67
NF1-221ENST00000581790 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
NF1-221ENST00000581790 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
NF1-221ENST00000581790 RGS20O76081 388 aa10.84□□□□□ -0.67
NF1-221ENST00000581790 STAC3Q96MF2 364 aa10.84□□□□□ -0.67
NF1-221ENST00000581790 KCNK17Q96T54 332 aa10.82□□□□□ -0.68
NF1-221ENST00000581790 IFFO2Q5TF58 517 aa10.81□□□□□ -0.68
NF1-221ENST00000581790 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
NF1-221ENST00000581790 SMARCA2P51531 1590 aa10.8□□□□□ -0.68
NF1-221ENST00000581790 PPP1R37O75864 691 aa10.79□□□□□ -0.68
NF1-221ENST00000581790 PTPN5P54829 565 aa10.79□□□□□ -0.68
NF1-221ENST00000581790 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
NF1-221ENST00000581790 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
NF1-221ENST00000581790 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.68
NF1-221ENST00000581790 A0A0G2JS52 829 aa10.76□□□□□ -0.69
NF1-221ENST00000581790 FOXK1P85037 733 aa10.76□□□□□ -0.69
NF1-221ENST00000581790 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
NF1-221ENST00000581790 CCDC88BA6NC98 1476 aa10.74□□□□□ -0.69
NF1-221ENST00000581790 ATAD2BQ9ULI0 1458 aa10.73□□□□□ -0.69
NF1-221ENST00000581790 TBC1D12O60347 775 aa10.72□□□□□ -0.69
NF1-221ENST00000581790 ECM2O94769 699 aaPredicted RBP10.72□□□□□ -0.69
NF1-221ENST00000581790 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
NF1-221ENST00000581790 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
NF1-221ENST00000581790 DSG2Q14126 1118 aa10.7□□□□□ -0.7
NF1-221ENST00000581790 GPHNQ9NQX3 736 aaPredicted RBP10.7□□□□□ -0.7
NF1-221ENST00000581790 SLC4A5Q9BY07 1137 aa10.69□□□□□ -0.7
NF1-221ENST00000581790 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
NF1-221ENST00000581790 BHMG1C9JSJ3 638 aaPredicted RBP10.67□□□□□ -0.7
NF1-221ENST00000581790 RGL2O15211 777 aa10.67□□□□□ -0.7
NF1-221ENST00000581790 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
NF1-221ENST00000581790 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
NF1-221ENST00000581790 WNT2BQ93097 391 aa10.65□□□□□ -0.7
NF1-221ENST00000581790 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
NF1-221ENST00000581790 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
NF1-221ENST00000581790 MRPL50Q8N5N7 158 aaKnown RBP10.62□□□□□ -0.71
NF1-221ENST00000581790 OXER1Q8TDS5 423 aa10.62□□□□□ -0.71
NF1-221ENST00000581790 ZBED2Q9BTP6 218 aa10.62□□□□□ -0.71
NF1-221ENST00000581790 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
NF1-221ENST00000581790 PTPREP23469 700 aa10.6□□□□□ -0.71
NF1-221ENST00000581790 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms