RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TCOF1Q13428 1488 aaKnown RBP21.76■■□□□ 1.07
MKS1-211ENST00000581761 CD109Q6YHK3 1445 aa21.74■■□□□ 1.07
MKS1-211ENST00000581761 MIA2Q96PC5 1412 aa21.74■■□□□ 1.07
MKS1-211ENST00000581761 SETD5Q9C0A6 1442 aa21.73■■□□□ 1.07
MKS1-211ENST00000581761 RAB3GAP2Q9H2M9 1393 aa21.72■■□□□ 1.07
MKS1-211ENST00000581761 ABCA9Q8IUA7 1624 aa21.71■■□□□ 1.07
MKS1-211ENST00000581761 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
MKS1-211ENST00000581761 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
MKS1-211ENST00000581761 KIF14Q15058 1648 aa21.69■■□□□ 1.06
MKS1-211ENST00000581761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.68■■□□□ 1.06
MKS1-211ENST00000581761 TEX14Q8IWB6 1497 aa21.66■■□□□ 1.06
MKS1-211ENST00000581761 PTPRKQ15262 1439 aa21.66■■□□□ 1.06
MKS1-211ENST00000581761 COL17A1Q9UMD9 1497 aaPredicted RBP21.65■■□□□ 1.06
MKS1-211ENST00000581761 ITSN2Q9NZM3 1697 aa21.64■■□□□ 1.05
MKS1-211ENST00000581761 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
MKS1-211ENST00000581761 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
MKS1-211ENST00000581761 GPATCH8Q9UKJ3 1502 aaKnown RBP21.61■■□□□ 1.05
MKS1-211ENST00000581761 HFM1A2PYH4 1435 aa21.58■■□□□ 1.05
MKS1-211ENST00000581761 CFDP1Q9UEE9 299 aaPredicted RBP21.58■■□□□ 1.05
MKS1-211ENST00000581761 PLCH2O75038 1416 aa21.55■■□□□ 1.04
MKS1-211ENST00000581761 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
MKS1-211ENST00000581761 DNMT1P26358 1616 aaKnown RBP21.54■■□□□ 1.04
MKS1-211ENST00000581761 DAPK1P53355 1430 aa21.54■■□□□ 1.04
MKS1-211ENST00000581761 NAIPQ13075 1403 aa21.54■■□□□ 1.04
MKS1-211ENST00000581761 ZNF644Q9H582 1327 aaPredicted RBP21.54■■□□□ 1.04
MKS1-211ENST00000581761 CHIC2Q9UKJ5 165 aa21.53■■□□□ 1.04
MKS1-211ENST00000581761 NEO1Q92859 1461 aa21.52■■□□□ 1.04
MKS1-211ENST00000581761 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.04
MKS1-211ENST00000581761 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
MKS1-211ENST00000581761 ABCC5O15440 1437 aa21.51■■□□□ 1.03
MKS1-211ENST00000581761 FANCAO15360 1455 aa21.51■■□□□ 1.03
MKS1-211ENST00000581761 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
MKS1-211ENST00000581761 ZNF777Q9ULD5 760 aaPredicted RBP21.5■■□□□ 1.03
MKS1-211ENST00000581761 GCC2Q8IWJ2 1684 aa21.5■■□□□ 1.03
MKS1-211ENST00000581761 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
MKS1-211ENST00000581761 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
MKS1-211ENST00000581761 ROCK1Q13464 1354 aa21.46■■□□□ 1.03
MKS1-211ENST00000581761 MYO5CQ9NQX4 1742 aa21.45■■□□□ 1.02
MKS1-211ENST00000581761 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
MKS1-211ENST00000581761 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
MKS1-211ENST00000581761 KDM4FA0A1W2PPD8 638 aa21.43■■□□□ 1.02
MKS1-211ENST00000581761 CDC42BPBQ9Y5S2 1711 aa21.41■■□□□ 1.02
MKS1-211ENST00000581761 ARHGAP5Q13017 1502 aa21.41■■□□□ 1.02
MKS1-211ENST00000581761 CROCC2H7BZ55 1655 aa21.4■■□□□ 1.02
MKS1-211ENST00000581761 ADGBQ8N7X0 1667 aa21.4■■□□□ 1.02
MKS1-211ENST00000581761 FRMPD1Q5SYB0 1578 aa21.4■■□□□ 1.02
MKS1-211ENST00000581761 CFAP74Q9C0B2 1584 aa21.4■■□□□ 1.02
MKS1-211ENST00000581761 DENND4BO75064 1496 aaPredicted RBP21.39■■□□□ 1.01
MKS1-211ENST00000581761 ADGRL1O94910 1474 aa21.39■■□□□ 1.01
MKS1-211ENST00000581761 SCAPERQ9BY12 1400 aa21.38■■□□□ 1.01
MKS1-211ENST00000581761 ADGRL2O95490 1459 aa21.36■■□□□ 1.01
MKS1-211ENST00000581761 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
MKS1-211ENST00000581761 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
MKS1-211ENST00000581761 ARHGEF5Q12774 1597 aa21.35■■□□□ 1.01
MKS1-211ENST00000581761 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
MKS1-211ENST00000581761 RICTORQ6R327 1708 aa21.33■■□□□ 1.01
MKS1-211ENST00000581761 POGZQ7Z3K3 1410 aa21.32■■□□□ 1
MKS1-211ENST00000581761 TRIM52Q96A61 297 aa21.32■■□□□ 1
MKS1-211ENST00000581761 ANKRD30AQ9BXX3 1397 aa21.32■■□□□ 1
MKS1-211ENST00000581761 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
MKS1-211ENST00000581761 NCOA1Q15788 1441 aa21.31■■□□□ 1
MKS1-211ENST00000581761 C9orf84Q5VXU9 1444 aa21.31■■□□□ 1
MKS1-211ENST00000581761 AFAP1Q8N556 730 aa21.31■■□□□ 1
MKS1-211ENST00000581761 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 1
MKS1-211ENST00000581761 CCDC141Q6ZP82 1450 aa21.3■■□□□ 1
MKS1-211ENST00000581761 MBD5Q9P267 1494 aa21.3■■□□□ 1
MKS1-211ENST00000581761 TRAPPC8Q9Y2L5 1435 aa21.29■■□□□ 1
MKS1-211ENST00000581761 ABCC1P33527 1531 aa21.29■■□□□ 1
MKS1-211ENST00000581761 PLEKHH2Q8IVE3 1493 aa21.29■■□□□ 1
MKS1-211ENST00000581761 TSPY4P0CV99 314 aa21.28■■□□□ 1
MKS1-211ENST00000581761 TSPY10P0CW01 314 aa21.28■■□□□ 1
MKS1-211ENST00000581761 RSPH4AQ5TD94 716 aa21.27■■□□□ 1
MKS1-211ENST00000581761 SIN3AQ96ST3 1273 aa21.27■■□□□ 1
MKS1-211ENST00000581761 SYCP2Q9BX26 1530 aa21.27■■□□□ 1
MKS1-211ENST00000581761 ZMYM4Q5VZL5 1548 aa21.26■□□□□ 0.99
MKS1-211ENST00000581761 NEUROD1Q13562 356 aa21.25■□□□□ 0.99
MKS1-211ENST00000581761 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
MKS1-211ENST00000581761 KIAA1107Q9UPP5 1409 aa21.24■□□□□ 0.99
MKS1-211ENST00000581761 ZNF518AQ6AHZ1 1483 aa21.24■□□□□ 0.99
MKS1-211ENST00000581761 KDM5CP41229 1560 aa21.23■□□□□ 0.99
MKS1-211ENST00000581761 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
MKS1-211ENST00000581761 MAGI2Q86UL8 1455 aa21.2■□□□□ 0.98
MKS1-211ENST00000581761 MAST1Q9Y2H9 1570 aa21.2■□□□□ 0.98
MKS1-211ENST00000581761 MPHOSPH9Q99550 1183 aa21.2■□□□□ 0.98
MKS1-211ENST00000581761 ANKRD50Q9ULJ7 1429 aa21.2■□□□□ 0.98
MKS1-211ENST00000581761 TIMELESSQ9UNS1 1208 aa21.19■□□□□ 0.98
MKS1-211ENST00000581761 ZFYVE16Q7Z3T8 1539 aa21.19■□□□□ 0.98
MKS1-211ENST00000581761 ARHGEF40Q8TER5 1519 aa21.19■□□□□ 0.98
MKS1-211ENST00000581761 KIF15Q9NS87 1388 aa21.18■□□□□ 0.98
MKS1-211ENST00000581761 MLH3Q9UHC1 1453 aa21.17■□□□□ 0.98
MKS1-211ENST00000581761 ARID4BQ4LE39 1312 aaPredicted RBP21.15■□□□□ 0.98
MKS1-211ENST00000581761 HECW2Q9P2P5 1572 aa21.13■□□□□ 0.97
MKS1-211ENST00000581761 PZPP20742 1482 aa21.13■□□□□ 0.97
MKS1-211ENST00000581761 SIGLEC1Q9BZZ2 1709 aa21.12■□□□□ 0.97
MKS1-211ENST00000581761 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
MKS1-211ENST00000581761 SLC4A1APQ9BWU0 796 aaKnown RBP21.12■□□□□ 0.97
MKS1-211ENST00000581761 ATP10AO60312 1499 aa21.12■□□□□ 0.97
MKS1-211ENST00000581761 SPAG9O60271 1321 aaKnown RBP21.11■□□□□ 0.97
MKS1-211ENST00000581761 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
MKS1-211ENST00000581761 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms