RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 ARSIQ5FYB1 569 aa12.98□□□□□ -0.33
TVP23B-209ENST00000581733 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
TVP23B-209ENST00000581733 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
TVP23B-209ENST00000581733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-209ENST00000581733 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
TVP23B-209ENST00000581733 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-209ENST00000581733 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
TVP23B-209ENST00000581733 PTGER2P43116 358 aa12.92□□□□□ -0.34
TVP23B-209ENST00000581733 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-209ENST00000581733 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-209ENST00000581733 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
TVP23B-209ENST00000581733 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-209ENST00000581733 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
TVP23B-209ENST00000581733 NLRP6P59044 892 aa12.81□□□□□ -0.36
TVP23B-209ENST00000581733 NUDT7P0C024 238 aa12.77□□□□□ -0.37
TVP23B-209ENST00000581733 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
TVP23B-209ENST00000581733 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
TVP23B-209ENST00000581733 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
TVP23B-209ENST00000581733 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
TVP23B-209ENST00000581733 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
TVP23B-209ENST00000581733 PBX2P40425 430 aa12.71□□□□□ -0.37
TVP23B-209ENST00000581733 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
TVP23B-209ENST00000581733 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
TVP23B-209ENST00000581733 KIF3CO14782 793 aa12.69□□□□□ -0.38
TVP23B-209ENST00000581733 MFRPQ9BY79 579 aa12.69□□□□□ -0.38
TVP23B-209ENST00000581733 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
TVP23B-209ENST00000581733 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
TVP23B-209ENST00000581733 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
TVP23B-209ENST00000581733 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
TVP23B-209ENST00000581733 STK25O00506 426 aa12.62□□□□□ -0.39
TVP23B-209ENST00000581733 SLC34A2O95436 690 aa12.6□□□□□ -0.39
TVP23B-209ENST00000581733 TMC2Q8TDI7 906 aa12.6□□□□□ -0.39
TVP23B-209ENST00000581733 ADGRD1Q6QNK2 874 aa12.59□□□□□ -0.39
TVP23B-209ENST00000581733 ARHGAP33O14559 1287 aa12.56□□□□□ -0.4
TVP23B-209ENST00000581733 PSEN2P49810 448 aa12.5□□□□□ -0.41
TVP23B-209ENST00000581733 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
TVP23B-209ENST00000581733 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
TVP23B-209ENST00000581733 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-209ENST00000581733 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
TVP23B-209ENST00000581733 TK2O00142 265 aa12.46□□□□□ -0.41
TVP23B-209ENST00000581733 PPP1R37O75864 691 aa12.46□□□□□ -0.41
TVP23B-209ENST00000581733 HRO43593 1189 aa12.45□□□□□ -0.42
TVP23B-209ENST00000581733 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
TVP23B-209ENST00000581733 STAC3Q96MF2 364 aa12.43□□□□□ -0.42
TVP23B-209ENST00000581733 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
TVP23B-209ENST00000581733 PTCD2Q8WV60 388 aaKnown RBP12.41□□□□□ -0.42
TVP23B-209ENST00000581733 RGL2O15211 777 aa12.4□□□□□ -0.42
TVP23B-209ENST00000581733 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
TVP23B-209ENST00000581733 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
TVP23B-209ENST00000581733 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
TVP23B-209ENST00000581733 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
TVP23B-209ENST00000581733 PTPN5P54829 565 aa12.34□□□□□ -0.43
TVP23B-209ENST00000581733 FOXK1P85037 733 aa12.34□□□□□ -0.43
TVP23B-209ENST00000581733 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
TVP23B-209ENST00000581733 TBC1D12O60347 775 aa12.31□□□□□ -0.44
TVP23B-209ENST00000581733 DSG2Q14126 1118 aa12.3□□□□□ -0.44
TVP23B-209ENST00000581733 PKD2Q13563 968 aa12.29□□□□□ -0.44
TVP23B-209ENST00000581733 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
TVP23B-209ENST00000581733 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
TVP23B-209ENST00000581733 ZCCHC6Q5VYS8 1495 aaKnown RBP12.24□□□□□ -0.45
TVP23B-209ENST00000581733 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
TVP23B-209ENST00000581733 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
TVP23B-209ENST00000581733 IRX2Q9BZI1 471 aaPredicted RBP12.2□□□□□ -0.46
TVP23B-209ENST00000581733 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
TVP23B-209ENST00000581733 GOLGA8CPA6NN73 597 aa12.18□□□□□ -0.46
TVP23B-209ENST00000581733 RGS20O76081 388 aa12.17□□□□□ -0.46
TVP23B-209ENST00000581733 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
TVP23B-209ENST00000581733 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
TVP23B-209ENST00000581733 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
TVP23B-209ENST00000581733 WNT2BQ93097 391 aa12.15□□□□□ -0.46
TVP23B-209ENST00000581733 A0A0G2JS52 829 aa12.14□□□□□ -0.47
TVP23B-209ENST00000581733 SLC4A5Q9BY07 1137 aa12.14□□□□□ -0.47
TVP23B-209ENST00000581733 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
TVP23B-209ENST00000581733 PTPREP23469 700 aa12.13□□□□□ -0.47
TVP23B-209ENST00000581733 MRPL50Q8N5N7 158 aaKnown RBP12.13□□□□□ -0.47
TVP23B-209ENST00000581733 ZBED2Q9BTP6 218 aa12.11□□□□□ -0.47
TVP23B-209ENST00000581733 FOSBP53539 338 aa12.1□□□□□ -0.47
TVP23B-209ENST00000581733 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
TVP23B-209ENST00000581733 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
TVP23B-209ENST00000581733 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
TVP23B-209ENST00000581733 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
TVP23B-209ENST00000581733 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
TVP23B-209ENST00000581733 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
TVP23B-209ENST00000581733 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
TVP23B-209ENST00000581733 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.49
TVP23B-209ENST00000581733 JPH4Q96JJ6 628 aa12.02□□□□□ -0.49
TVP23B-209ENST00000581733 EVI5O60447 810 aa12.01□□□□□ -0.49
TVP23B-209ENST00000581733 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
TVP23B-209ENST00000581733 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
TVP23B-209ENST00000581733 Q6ZNB5 142 aa11.96□□□□□ -0.49
TVP23B-209ENST00000581733 ANKK1Q8NFD2 765 aa11.96□□□□□ -0.49
TVP23B-209ENST00000581733 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.5
TVP23B-209ENST00000581733 NCKAP5LQ9HCH0 1330 aa11.95□□□□□ -0.5
TVP23B-209ENST00000581733 PROX2Q3B8N5 592 aa11.94□□□□□ -0.5
TVP23B-209ENST00000581733 PDE4AP27815 886 aa11.93□□□□□ -0.5
TVP23B-209ENST00000581733 BCAMP50895 628 aa11.93□□□□□ -0.5
TVP23B-209ENST00000581733 ABCC9O60706 1549 aa11.92□□□□□ -0.5
TVP23B-209ENST00000581733 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
TVP23B-209ENST00000581733 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
TVP23B-209ENST00000581733 PPP1R3GB7ZBB8 358 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms