RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CDC42BPBQ9Y5S2 1711 aa31.16■■■□□ 2.58
SREBF1-220ENST00000581707 POGZQ7Z3K3 1410 aa31.15■■■□□ 2.58
SREBF1-220ENST00000581707 ZMYM4Q5VZL5 1548 aa31.14■■■□□ 2.58
SREBF1-220ENST00000581707 PREX2Q70Z35 1606 aa31.13■■■□□ 2.57
SREBF1-220ENST00000581707 ARHGEF40Q8TER5 1519 aa31.13■■■□□ 2.57
SREBF1-220ENST00000581707 MTUS2Q5JR59 1369 aa31.11■■■□□ 2.57
SREBF1-220ENST00000581707 MAGI2Q86UL8 1455 aa31.1■■■□□ 2.57
SREBF1-220ENST00000581707 CDC42BPAQ5VT25 1732 aa31.1■■■□□ 2.57
SREBF1-220ENST00000581707 ZFYVE16Q7Z3T8 1539 aa31.08■■■□□ 2.57
SREBF1-220ENST00000581707 ARID4BQ4LE39 1312 aaPredicted RBP31.07■■■□□ 2.56
SREBF1-220ENST00000581707 YEATS2Q9ULM3 1422 aa31.06■■■□□ 2.56
SREBF1-220ENST00000581707 ZNF518AQ6AHZ1 1483 aa31.04■■■□□ 2.56
SREBF1-220ENST00000581707 AFAP1Q8N556 730 aa31.03■■■□□ 2.56
SREBF1-220ENST00000581707 GPATCH8Q9UKJ3 1502 aaKnown RBP31.03■■■□□ 2.56
SREBF1-220ENST00000581707 VPS8Q8N3P4 1428 aa31.01■■■□□ 2.55
SREBF1-220ENST00000581707 EHBP1L1Q8N3D4 1523 aa30.99■■■□□ 2.55
SREBF1-220ENST00000581707 ZNF777Q9ULD5 760 aaPredicted RBP30.99■■■□□ 2.55
SREBF1-220ENST00000581707 CCNB3Q8WWL7 1395 aa30.99■■■□□ 2.55
SREBF1-220ENST00000581707 ABCC1P33527 1531 aa30.98■■■□□ 2.55
SREBF1-220ENST00000581707 ADAMTSL3P82987 1691 aa30.98■■■□□ 2.55
SREBF1-220ENST00000581707 BCORL1Q5H9F3 1711 aa30.98■■■□□ 2.55
SREBF1-220ENST00000581707 KDM5CP41229 1560 aa30.97■■■□□ 2.55
SREBF1-220ENST00000581707 ARHGEF12Q9NZN5 1544 aa30.97■■■□□ 2.55
SREBF1-220ENST00000581707 CFDP1Q9UEE9 299 aaPredicted RBP30.95■■■□□ 2.55
SREBF1-220ENST00000581707 MYT1LQ9UL68 1186 aa30.95■■■□□ 2.55
SREBF1-220ENST00000581707 ITSN2Q9NZM3 1697 aa30.94■■■□□ 2.54
SREBF1-220ENST00000581707 TRAPPC8Q9Y2L5 1435 aa30.94■■■□□ 2.54
SREBF1-220ENST00000581707 ATP10AO60312 1499 aa30.94■■■□□ 2.54
SREBF1-220ENST00000581707 TIAM1Q13009 1591 aa30.92■■■□□ 2.54
SREBF1-220ENST00000581707 SAMD9LQ8IVG5 1584 aa30.92■■■□□ 2.54
SREBF1-220ENST00000581707 SIGLEC1Q9BZZ2 1709 aa30.91■■■□□ 2.54
SREBF1-220ENST00000581707 HECW2Q9P2P5 1572 aa30.9■■■□□ 2.54
SREBF1-220ENST00000581707 C9orf84Q5VXU9 1444 aa30.88■■■□□ 2.53
SREBF1-220ENST00000581707 MLH3Q9UHC1 1453 aa30.88■■■□□ 2.53
SREBF1-220ENST00000581707 HNRNPMP52272 730 aaKnown RBP eCLIP30.86■■■□□ 2.53
SREBF1-220ENST00000581707 PTPRMP28827 1452 aa30.86■■■□□ 2.53
SREBF1-220ENST00000581707 MADDQ8WXG6 1647 aa30.86■■■□□ 2.53
SREBF1-220ENST00000581707 SYCP2Q9BX26 1530 aa30.85■■■□□ 2.53
SREBF1-220ENST00000581707 PLEKHH2Q8IVE3 1493 aa30.85■■■□□ 2.53
SREBF1-220ENST00000581707 SUPT6HQ7KZ85 1726 aaKnown RBP30.84■■■□□ 2.53
SREBF1-220ENST00000581707 KIAA1107Q9UPP5 1409 aa30.83■■■□□ 2.53
SREBF1-220ENST00000581707 MLECQ14165 292 aa30.82■■■□□ 2.52
SREBF1-220ENST00000581707 DIP2CQ9Y2E4 1556 aa30.82■■■□□ 2.52
SREBF1-220ENST00000581707 NCOA2Q15596 1464 aa30.82■■■□□ 2.52
SREBF1-220ENST00000581707 LRRC9Q6ZRR7 1453 aa30.8■■■□□ 2.52
SREBF1-220ENST00000581707 MAP3K1Q13233 1512 aa30.79■■■□□ 2.52
SREBF1-220ENST00000581707 ABCA6Q8N139 1617 aa30.79■■■□□ 2.52
SREBF1-220ENST00000581707 KIDINS220Q9ULH0 1771 aa30.78■■■□□ 2.52
SREBF1-220ENST00000581707 RIMS1Q86UR5 1692 aaKnown RBP30.78■■■□□ 2.52
SREBF1-220ENST00000581707 ZNF644Q9H582 1327 aaPredicted RBP30.77■■■□□ 2.52
SREBF1-220ENST00000581707 SPAG9O60271 1321 aaKnown RBP30.76■■■□□ 2.52
SREBF1-220ENST00000581707 REREQ9P2R6 1566 aa30.75■■■□□ 2.51
SREBF1-220ENST00000581707 KANK4Q5T7N3 995 aaPredicted RBP30.74■■■□□ 2.51
SREBF1-220ENST00000581707 FER1L4A9Z1Z3 1794 aa30.71■■■□□ 2.51
SREBF1-220ENST00000581707 APLP2Q06481 763 aa30.7■■■□□ 2.51
SREBF1-220ENST00000581707 MBD5Q9P267 1494 aa30.68■■■□□ 2.5
SREBF1-220ENST00000581707 ATP7AQ04656 1500 aa30.67■■■□□ 2.5
SREBF1-220ENST00000581707 AGLP35573 1532 aa30.66■■■□□ 2.5
SREBF1-220ENST00000581707 INO80Q9ULG1 1556 aaPredicted RBP30.64■■■□□ 2.5
SREBF1-220ENST00000581707 PLPPR3Q6T4P5 718 aa30.64■■■□□ 2.5
SREBF1-220ENST00000581707 CAMSAP2Q08AD1 1489 aa30.63■■■□□ 2.49
SREBF1-220ENST00000581707 RSPH4AQ5TD94 716 aa30.59■■■□□ 2.49
SREBF1-220ENST00000581707 CCDC141Q6ZP82 1450 aa30.56■■■□□ 2.48
SREBF1-220ENST00000581707 RTEL1-TNFRSF6BF6WH68 1400 aa30.56■■■□□ 2.48
SREBF1-220ENST00000581707 A2MP01023 1474 aa30.55■■■□□ 2.48
SREBF1-220ENST00000581707 MYOM3Q5VTT5 1437 aa30.54■■■□□ 2.48
SREBF1-220ENST00000581707 ESF1Q9H501 851 aaKnown RBP30.53■■■□□ 2.48
SREBF1-220ENST00000581707 ADGBQ8N7X0 1667 aa30.52■■■□□ 2.48
SREBF1-220ENST00000581707 MIA2Q96PC5 1412 aa30.51■■■□□ 2.47
SREBF1-220ENST00000581707 CEBPAP49715 358 aaPredicted RBP30.51■■■□□ 2.47
SREBF1-220ENST00000581707 PLXNC1O60486 1568 aa30.5■■■□□ 2.47
SREBF1-220ENST00000581707 ARHGEF5Q12774 1597 aa30.5■■■□□ 2.47
SREBF1-220ENST00000581707 LMTK3Q96Q04 1460 aa30.49■■■□□ 2.47
SREBF1-220ENST00000581707 TSPY4P0CV99 314 aa30.47■■■□□ 2.47
SREBF1-220ENST00000581707 TSPY10P0CW01 314 aa30.47■■■□□ 2.47
SREBF1-220ENST00000581707 CNTLNQ9NXG0 1405 aa30.43■■■□□ 2.46
SREBF1-220ENST00000581707 DHX29Q7Z478 1369 aaKnown RBP30.42■■■□□ 2.46
SREBF1-220ENST00000581707 GGT6Q6P531 493 aa30.41■■■□□ 2.46
SREBF1-220ENST00000581707 C3P01024 1663 aa30.41■■■□□ 2.46
SREBF1-220ENST00000581707 SETD1BQ9UPS6 1966 aaKnown RBP30.38■■■□□ 2.45
SREBF1-220ENST00000581707 HSPA2P54652 639 aa30.36■■■□□ 2.45
SREBF1-220ENST00000581707 PREX1Q8TCU6 1659 aa30.36■■■□□ 2.45
SREBF1-220ENST00000581707 PTPN23Q9H3S7 1636 aa30.35■■■□□ 2.45
SREBF1-220ENST00000581707 MROH2AA6NES4 1674 aa30.34■■■□□ 2.45
SREBF1-220ENST00000581707 MAST1Q9Y2H9 1570 aa30.34■■■□□ 2.45
SREBF1-220ENST00000581707 PPP6R1Q9UPN7 881 aa30.34■■■□□ 2.45
SREBF1-220ENST00000581707 FGD6Q6ZV73 1430 aa30.33■■■□□ 2.45
SREBF1-220ENST00000581707 ZMYM3Q14202 1370 aa30.33■■■□□ 2.45
SREBF1-220ENST00000581707 KIF3BO15066 747 aa30.33■■■□□ 2.45
SREBF1-220ENST00000581707 CLTCQ00610 1675 aaKnown RBP30.32■■■□□ 2.44
SREBF1-220ENST00000581707 UHRF1BP1Q6BDS2 1440 aa30.28■■■□□ 2.44
SREBF1-220ENST00000581707 TCOF1Q13428 1488 aaKnown RBP30.26■■■□□ 2.44
SREBF1-220ENST00000581707 ABCC5O15440 1437 aa30.25■■■□□ 2.43
SREBF1-220ENST00000581707 NPATQ14207 1427 aa30.23■■■□□ 2.43
SREBF1-220ENST00000581707 CROCC2H7BZ55 1655 aa30.21■■■□□ 2.43
SREBF1-220ENST00000581707 DAPK1P53355 1430 aa30.21■■■□□ 2.43
SREBF1-220ENST00000581707 SHANK2Q9UPX8 1470 aa30.2■■■□□ 2.43
SREBF1-220ENST00000581707 DNMT1P26358 1616 aaKnown RBP30.19■■■□□ 2.42
SREBF1-220ENST00000581707 WASHC2CQ9Y4E1 1318 aa30.17■■■□□ 2.42
SREBF1-220ENST00000581707 PTPRKQ15262 1439 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms