RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
SUPT4H1-207ENST00000581540 A6NJR5 290 aa12.79□□□□□ -0.36
SUPT4H1-207ENST00000581540 CCDC82Q8N4S0 544 aa12.79□□□□□ -0.36
SUPT4H1-207ENST00000581540 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
SUPT4H1-207ENST00000581540 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
SUPT4H1-207ENST00000581540 FAM117AQ9C073 453 aa12.79□□□□□ -0.36
SUPT4H1-207ENST00000581540 PSEN1P49768 467 aa12.78□□□□□ -0.36
SUPT4H1-207ENST00000581540 KCTD17Q8N5Z5 321 aa12.77□□□□□ -0.37
SUPT4H1-207ENST00000581540 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
SUPT4H1-207ENST00000581540 SOX12O15370 315 aa12.76□□□□□ -0.37
SUPT4H1-207ENST00000581540 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
SUPT4H1-207ENST00000581540 CUX2O14529 1486 aa12.75□□□□□ -0.37
SUPT4H1-207ENST00000581540 TRAK2O60296 914 aa12.74□□□□□ -0.37
SUPT4H1-207ENST00000581540 CAMK2BQ13554 666 aa12.74□□□□□ -0.37
SUPT4H1-207ENST00000581540 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
SUPT4H1-207ENST00000581540 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
SUPT4H1-207ENST00000581540 PCDHB13Q9Y5F0 798 aa12.72□□□□□ -0.37
SUPT4H1-207ENST00000581540 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
SUPT4H1-207ENST00000581540 GOPCQ9HD26 462 aa12.71□□□□□ -0.37
SUPT4H1-207ENST00000581540 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
SUPT4H1-207ENST00000581540 PLEKHG3A1L390 1219 aa12.69□□□□□ -0.38
SUPT4H1-207ENST00000581540 CRISPLD2Q9H0B8 497 aa12.69□□□□□ -0.38
SUPT4H1-207ENST00000581540 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
SUPT4H1-207ENST00000581540 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
SUPT4H1-207ENST00000581540 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
SUPT4H1-207ENST00000581540 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
SUPT4H1-207ENST00000581540 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
SUPT4H1-207ENST00000581540 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
SUPT4H1-207ENST00000581540 RAD21O60216 631 aa12.63□□□□□ -0.39
SUPT4H1-207ENST00000581540 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
SUPT4H1-207ENST00000581540 AMHR2Q16671 573 aa12.62□□□□□ -0.39
SUPT4H1-207ENST00000581540 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
SUPT4H1-207ENST00000581540 SERPINA10Q9UK55 444 aa12.62□□□□□ -0.39
SUPT4H1-207ENST00000581540 CCDC97Q96F63 343 aaPredicted RBP12.61□□□□□ -0.39
SUPT4H1-207ENST00000581540 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
SUPT4H1-207ENST00000581540 PCMTD1Q96MG8 357 aaPredicted RBP12.6□□□□□ -0.39
SUPT4H1-207ENST00000581540 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
SUPT4H1-207ENST00000581540 PARP9Q8IXQ6 854 aa12.58□□□□□ -0.4
SUPT4H1-207ENST00000581540 CCDC102AQ96A19 550 aa12.58□□□□□ -0.4
SUPT4H1-207ENST00000581540 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
SUPT4H1-207ENST00000581540 AEBP1Q8IUX7 1158 aa12.57□□□□□ -0.4
SUPT4H1-207ENST00000581540 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
SUPT4H1-207ENST00000581540 GPR37O15354 613 aa12.55□□□□□ -0.4
SUPT4H1-207ENST00000581540 TMCO4Q5TGY1 634 aa12.55□□□□□ -0.4
SUPT4H1-207ENST00000581540 MCM6Q14566 821 aa12.54□□□□□ -0.4
SUPT4H1-207ENST00000581540 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
SUPT4H1-207ENST00000581540 IRF6O14896 467 aa12.53□□□□□ -0.4
SUPT4H1-207ENST00000581540 PDIA6Q15084 440 aa12.53□□□□□ -0.4
SUPT4H1-207ENST00000581540 RGS22Q8NE09 1264 aa12.51□□□□□ -0.41
SUPT4H1-207ENST00000581540 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
SUPT4H1-207ENST00000581540 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
SUPT4H1-207ENST00000581540 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
SUPT4H1-207ENST00000581540 DPYSL4O14531 572 aa12.48□□□□□ -0.41
SUPT4H1-207ENST00000581540 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
SUPT4H1-207ENST00000581540 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
SUPT4H1-207ENST00000581540 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
SUPT4H1-207ENST00000581540 NUTM2FA1L443 756 aa12.44□□□□□ -0.42
SUPT4H1-207ENST00000581540 IFNL1Q8IU54 200 aa12.44□□□□□ -0.42
SUPT4H1-207ENST00000581540 MTMR7Q9Y216 660 aa12.44□□□□□ -0.42
SUPT4H1-207ENST00000581540 GNPATO15228 680 aa12.43□□□□□ -0.42
SUPT4H1-207ENST00000581540 MFAP1P55081 439 aaKnown RBP12.43□□□□□ -0.42
SUPT4H1-207ENST00000581540 PDE4CQ08493 712 aa12.43□□□□□ -0.42
SUPT4H1-207ENST00000581540 MS4A4AQ96JQ5 239 aa12.43□□□□□ -0.42
SUPT4H1-207ENST00000581540 PATL2C9JE40 543 aaKnown RBP12.42□□□□□ -0.42
SUPT4H1-207ENST00000581540 SH3D19Q5HYK7 790 aa12.42□□□□□ -0.42
SUPT4H1-207ENST00000581540 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
SUPT4H1-207ENST00000581540 RETREG2Q8NC44 543 aa12.41□□□□□ -0.42
SUPT4H1-207ENST00000581540 GZF1Q9H116 711 aaPredicted RBP12.41□□□□□ -0.42
SUPT4H1-207ENST00000581540 GPHNQ9NQX3 736 aaPredicted RBP12.41□□□□□ -0.42
SUPT4H1-207ENST00000581540 HIC1Q14526 733 aa12.4□□□□□ -0.42
SUPT4H1-207ENST00000581540 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
SUPT4H1-207ENST00000581540 FCHSD2O94868 740 aa12.37□□□□□ -0.43
SUPT4H1-207ENST00000581540 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
SUPT4H1-207ENST00000581540 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
SUPT4H1-207ENST00000581540 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
SUPT4H1-207ENST00000581540 FBXW7Q969H0 707 aa12.36□□□□□ -0.43
SUPT4H1-207ENST00000581540 LOC105371045A0A1W2PR82 267 aa12.35□□□□□ -0.43
SUPT4H1-207ENST00000581540 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-207ENST00000581540 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
SUPT4H1-207ENST00000581540 PLSCR2Q9NRY7 297 aa12.35□□□□□ -0.43
SUPT4H1-207ENST00000581540 HMGXB3Q12766 1538 aa12.35□□□□□ -0.43
SUPT4H1-207ENST00000581540 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
SUPT4H1-207ENST00000581540 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
SUPT4H1-207ENST00000581540 MS4A1P11836 297 aa12.33□□□□□ -0.44
SUPT4H1-207ENST00000581540 POM121Q96HA1 1249 aa12.33□□□□□ -0.44
SUPT4H1-207ENST00000581540 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
SUPT4H1-207ENST00000581540 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
SUPT4H1-207ENST00000581540 GRXCR2A6NFK2 248 aa12.32□□□□□ -0.44
SUPT4H1-207ENST00000581540 SKIV2LQ15477 1246 aaKnown RBP12.31□□□□□ -0.44
SUPT4H1-207ENST00000581540 NESP48681 1621 aa12.3□□□□□ -0.44
SUPT4H1-207ENST00000581540 SPDYE5A6NIY4 337 aa12.3□□□□□ -0.44
SUPT4H1-207ENST00000581540 E9PSI1 815 aa12.3□□□□□ -0.44
SUPT4H1-207ENST00000581540 FOXD4L5Q5VV16 416 aaPredicted RBP12.3□□□□□ -0.44
SUPT4H1-207ENST00000581540 FOXD4L4Q8WXT5 416 aaPredicted RBP12.3□□□□□ -0.44
SUPT4H1-207ENST00000581540 ACIN1Q9UKV3 1341 aaKnown RBP12.3□□□□□ -0.44
SUPT4H1-207ENST00000581540 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
SUPT4H1-207ENST00000581540 MAP3K13O43283 966 aa12.29□□□□□ -0.44
SUPT4H1-207ENST00000581540 IGSF3O75054 1194 aa12.29□□□□□ -0.44
SUPT4H1-207ENST00000581540 IRF5Q13568 498 aa12.29□□□□□ -0.44
SUPT4H1-207ENST00000581540 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms