RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
TOP3A-211ENST00000581536 TEX14Q8IWB6 1497 aa15.82■□□□□ 0.12
TOP3A-211ENST00000581536 MAGI3Q5TCQ9 1506 aa15.81■□□□□ 0.12
TOP3A-211ENST00000581536 CDK13Q14004 1512 aaKnown RBP15.8■□□□□ 0.12
TOP3A-211ENST00000581536 DSG3P32926 999 aa15.8■□□□□ 0.12
TOP3A-211ENST00000581536 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
TOP3A-211ENST00000581536 LRRIQ1Q96JM4 1722 aa15.79■□□□□ 0.12
TOP3A-211ENST00000581536 KDM4FA0A1W2PPD8 638 aa15.78■□□□□ 0.12
TOP3A-211ENST00000581536 FMN1Q68DA7 1419 aa15.77■□□□□ 0.12
TOP3A-211ENST00000581536 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
TOP3A-211ENST00000581536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.73■□□□□ 0.11
TOP3A-211ENST00000581536 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
TOP3A-211ENST00000581536 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
TOP3A-211ENST00000581536 CLIP1P30622 1438 aa15.71■□□□□ 0.11
TOP3A-211ENST00000581536 POLA2Q14181 598 aa15.71■□□□□ 0.11
TOP3A-211ENST00000581536 ABCB7O75027 752 aa15.7■□□□□ 0.1
TOP3A-211ENST00000581536 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
TOP3A-211ENST00000581536 ARAP3Q8WWN8 1544 aa15.69■□□□□ 0.1
TOP3A-211ENST00000581536 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
TOP3A-211ENST00000581536 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
TOP3A-211ENST00000581536 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
TOP3A-211ENST00000581536 KIF14Q15058 1648 aa15.66■□□□□ 0.1
TOP3A-211ENST00000581536 NEO1Q92859 1461 aa15.65■□□□□ 0.1
TOP3A-211ENST00000581536 PHLDB1Q86UU1 1377 aa15.65■□□□□ 0.1
TOP3A-211ENST00000581536 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
TOP3A-211ENST00000581536 FANCAO15360 1455 aa15.63■□□□□ 0.09
TOP3A-211ENST00000581536 PLCH2O75038 1416 aa15.62■□□□□ 0.09
TOP3A-211ENST00000581536 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
TOP3A-211ENST00000581536 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
TOP3A-211ENST00000581536 FRMPD1Q5SYB0 1578 aa15.61■□□□□ 0.09
TOP3A-211ENST00000581536 MYO5CQ9NQX4 1742 aa15.6■□□□□ 0.09
TOP3A-211ENST00000581536 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
TOP3A-211ENST00000581536 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
TOP3A-211ENST00000581536 CDC42BPBQ9Y5S2 1711 aa15.59■□□□□ 0.09
TOP3A-211ENST00000581536 DENND4BO75064 1496 aaPredicted RBP15.58■□□□□ 0.08
TOP3A-211ENST00000581536 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
TOP3A-211ENST00000581536 EFCAB2Q5VUJ9 269 aa15.57■□□□□ 0.08
TOP3A-211ENST00000581536 CCDC18Q5T9S5 1454 aa15.57■□□□□ 0.08
TOP3A-211ENST00000581536 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
TOP3A-211ENST00000581536 CFAP74Q9C0B2 1584 aa15.56■□□□□ 0.08
TOP3A-211ENST00000581536 CDC42BPAQ5VT25 1732 aa15.53■□□□□ 0.08
TOP3A-211ENST00000581536 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
TOP3A-211ENST00000581536 AFAP1Q8N556 730 aa15.52■□□□□ 0.08
TOP3A-211ENST00000581536 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-211ENST00000581536 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-211ENST00000581536 YEATS2Q9ULM3 1422 aa15.5■□□□□ 0.07
TOP3A-211ENST00000581536 SIGLEC1Q9BZZ2 1709 aa15.49■□□□□ 0.07
TOP3A-211ENST00000581536 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
TOP3A-211ENST00000581536 PREX2Q70Z35 1606 aa15.47■□□□□ 0.07
TOP3A-211ENST00000581536 POGZQ7Z3K3 1410 aa15.47■□□□□ 0.07
TOP3A-211ENST00000581536 ARHGEF12Q9NZN5 1544 aa15.47■□□□□ 0.07
TOP3A-211ENST00000581536 GPATCH8Q9UKJ3 1502 aaKnown RBP15.46■□□□□ 0.07
TOP3A-211ENST00000581536 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
TOP3A-211ENST00000581536 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.06
TOP3A-211ENST00000581536 ADAMTSL3P82987 1691 aa15.45■□□□□ 0.06
TOP3A-211ENST00000581536 ZMYM4Q5VZL5 1548 aa15.45■□□□□ 0.06
TOP3A-211ENST00000581536 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.06
TOP3A-211ENST00000581536 MYT1LQ9UL68 1186 aa15.45■□□□□ 0.06
TOP3A-211ENST00000581536 TRAPPC8Q9Y2L5 1435 aa15.44■□□□□ 0.06
TOP3A-211ENST00000581536 ZFYVE16Q7Z3T8 1539 aa15.44■□□□□ 0.06
TOP3A-211ENST00000581536 MLECQ14165 292 aa15.44■□□□□ 0.06
TOP3A-211ENST00000581536 ARHGEF40Q8TER5 1519 aa15.43■□□□□ 0.06
TOP3A-211ENST00000581536 ITSN2Q9NZM3 1697 aa15.42■□□□□ 0.06
TOP3A-211ENST00000581536 MAGI2Q86UL8 1455 aa15.42■□□□□ 0.06
TOP3A-211ENST00000581536 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
TOP3A-211ENST00000581536 CCNB3Q8WWL7 1395 aa15.41■□□□□ 0.06
TOP3A-211ENST00000581536 CFDP1Q9UEE9 299 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-211ENST00000581536 SAMD9LQ8IVG5 1584 aa15.41■□□□□ 0.06
TOP3A-211ENST00000581536 MADDQ8WXG6 1647 aa15.4■□□□□ 0.06
TOP3A-211ENST00000581536 ABCC1P33527 1531 aa15.4■□□□□ 0.06
TOP3A-211ENST00000581536 KANK4Q5T7N3 995 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-211ENST00000581536 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
TOP3A-211ENST00000581536 ATP10AO60312 1499 aa15.4■□□□□ 0.06
TOP3A-211ENST00000581536 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
TOP3A-211ENST00000581536 KDM5CP41229 1560 aa15.38■□□□□ 0.05
TOP3A-211ENST00000581536 PTPRMP28827 1452 aa15.38■□□□□ 0.05
TOP3A-211ENST00000581536 RIMS1Q86UR5 1692 aaKnown RBP15.37■□□□□ 0.05
TOP3A-211ENST00000581536 EHBP1L1Q8N3D4 1523 aa15.37■□□□□ 0.05
TOP3A-211ENST00000581536 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
TOP3A-211ENST00000581536 KIDINS220Q9ULH0 1771 aa15.36■□□□□ 0.05
TOP3A-211ENST00000581536 SYCP2Q9BX26 1530 aa15.35■□□□□ 0.05
TOP3A-211ENST00000581536 HECW2Q9P2P5 1572 aa15.35■□□□□ 0.05
TOP3A-211ENST00000581536 ABCA6Q8N139 1617 aa15.35■□□□□ 0.05
TOP3A-211ENST00000581536 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
TOP3A-211ENST00000581536 MLH3Q9UHC1 1453 aa15.34■□□□□ 0.05
TOP3A-211ENST00000581536 DIP2CQ9Y2E4 1556 aa15.34■□□□□ 0.05
TOP3A-211ENST00000581536 SUPT6HQ7KZ85 1726 aaKnown RBP15.34■□□□□ 0.05
TOP3A-211ENST00000581536 NCOA2Q15596 1464 aa15.33■□□□□ 0.05
TOP3A-211ENST00000581536 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
TOP3A-211ENST00000581536 LRRC9Q6ZRR7 1453 aa15.32■□□□□ 0.04
TOP3A-211ENST00000581536 FER1L4A9Z1Z3 1794 aa15.31■□□□□ 0.04
TOP3A-211ENST00000581536 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
TOP3A-211ENST00000581536 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-211ENST00000581536 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
TOP3A-211ENST00000581536 MBD5Q9P267 1494 aa15.28■□□□□ 0.04
TOP3A-211ENST00000581536 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
TOP3A-211ENST00000581536 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
TOP3A-211ENST00000581536 REREQ9P2R6 1566 aa15.24■□□□□ 0.03
TOP3A-211ENST00000581536 ATP7AQ04656 1500 aa15.24■□□□□ 0.03
TOP3A-211ENST00000581536 CAMSAP2Q08AD1 1489 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms