RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 APLP2Q06481 763 aa24.22■■□□□ 1.47
CDC6-204ENST00000580824 AKNAQ7Z591 1439 aa24.2■■□□□ 1.46
CDC6-204ENST00000580824 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.46
CDC6-204ENST00000580824 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.46
CDC6-204ENST00000580824 EFCAB2Q5VUJ9 269 aa24.19■■□□□ 1.46
CDC6-204ENST00000580824 NCOA2Q15596 1464 aa24.19■■□□□ 1.46
CDC6-204ENST00000580824 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
CDC6-204ENST00000580824 CCNB3Q8WWL7 1395 aa24.17■■□□□ 1.46
CDC6-204ENST00000580824 ADGRL1O94910 1474 aa24.14■■□□□ 1.46
CDC6-204ENST00000580824 KANK4Q5T7N3 995 aaPredicted RBP24.14■■□□□ 1.45
CDC6-204ENST00000580824 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
CDC6-204ENST00000580824 RICTORQ6R327 1708 aa24.11■■□□□ 1.45
CDC6-204ENST00000580824 FRMPD1Q5SYB0 1578 aa24.11■■□□□ 1.45
CDC6-204ENST00000580824 ABCC1P33527 1531 aa24.1■■□□□ 1.45
CDC6-204ENST00000580824 POGZQ7Z3K3 1410 aa24.08■■□□□ 1.44
CDC6-204ENST00000580824 SCAPERQ9BY12 1400 aa24.08■■□□□ 1.44
CDC6-204ENST00000580824 PLEKHH2Q8IVE3 1493 aa24.07■■□□□ 1.44
CDC6-204ENST00000580824 ZMYM4Q5VZL5 1548 aa24.07■■□□□ 1.44
CDC6-204ENST00000580824 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
CDC6-204ENST00000580824 SAMD9LQ8IVG5 1584 aa24.07■■□□□ 1.44
CDC6-204ENST00000580824 KIAA1107Q9UPP5 1409 aa24.05■■□□□ 1.44
CDC6-204ENST00000580824 ZNF518AQ6AHZ1 1483 aa24.04■■□□□ 1.44
CDC6-204ENST00000580824 RAPGEF3O95398 923 aa24.03■■□□□ 1.44
CDC6-204ENST00000580824 MYOM3Q5VTT5 1437 aa24.02■■□□□ 1.44
CDC6-204ENST00000580824 KDM5CP41229 1560 aa24.02■■□□□ 1.44
CDC6-204ENST00000580824 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
CDC6-204ENST00000580824 MAGI2Q86UL8 1455 aa24.01■■□□□ 1.43
CDC6-204ENST00000580824 ARHGEF12Q9NZN5 1544 aa24■■□□□ 1.43
CDC6-204ENST00000580824 SYCP2Q9BX26 1530 aa23.98■■□□□ 1.43
CDC6-204ENST00000580824 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
CDC6-204ENST00000580824 CAMSAP2Q08AD1 1489 aa23.95■■□□□ 1.42
CDC6-204ENST00000580824 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.42
CDC6-204ENST00000580824 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
CDC6-204ENST00000580824 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
CDC6-204ENST00000580824 MLH3Q9UHC1 1453 aa23.94■■□□□ 1.42
CDC6-204ENST00000580824 HECW2Q9P2P5 1572 aa23.93■■□□□ 1.42
CDC6-204ENST00000580824 ZFYVE16Q7Z3T8 1539 aa23.92■■□□□ 1.42
CDC6-204ENST00000580824 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
CDC6-204ENST00000580824 AFAP1Q8N556 730 aa23.9■■□□□ 1.42
CDC6-204ENST00000580824 FGD6Q6ZV73 1430 aa23.9■■□□□ 1.42
CDC6-204ENST00000580824 ZNF644Q9H582 1327 aaPredicted RBP23.89■■□□□ 1.42
CDC6-204ENST00000580824 RSPH4AQ5TD94 716 aa23.89■■□□□ 1.41
CDC6-204ENST00000580824 TCOF1Q13428 1488 aaKnown RBP23.87■■□□□ 1.41
CDC6-204ENST00000580824 PTPN23Q9H3S7 1636 aa23.87■■□□□ 1.41
CDC6-204ENST00000580824 CCDC141Q6ZP82 1450 aa23.87■■□□□ 1.41
CDC6-204ENST00000580824 HNRNPMP52272 730 aaKnown RBP eCLIP23.86■■□□□ 1.41
CDC6-204ENST00000580824 YEATS2Q9ULM3 1422 aa23.85■■□□□ 1.41
CDC6-204ENST00000580824 INO80Q9ULG1 1556 aaPredicted RBP23.85■■□□□ 1.41
CDC6-204ENST00000580824 KIDINS220Q9ULH0 1771 aa23.84■■□□□ 1.41
CDC6-204ENST00000580824 REREQ9P2R6 1566 aa23.83■■□□□ 1.41
CDC6-204ENST00000580824 RTEL1-TNFRSF6BF6WH68 1400 aa23.82■■□□□ 1.4
CDC6-204ENST00000580824 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
CDC6-204ENST00000580824 ATP10AO60312 1499 aa23.81■■□□□ 1.4
CDC6-204ENST00000580824 ATP7AQ04656 1500 aa23.81■■□□□ 1.4
CDC6-204ENST00000580824 SPAG9O60271 1321 aaKnown RBP23.81■■□□□ 1.4
CDC6-204ENST00000580824 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
CDC6-204ENST00000580824 C9orf84Q5VXU9 1444 aa23.79■■□□□ 1.4
CDC6-204ENST00000580824 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
CDC6-204ENST00000580824 DNMT1P26358 1616 aaKnown RBP23.76■■□□□ 1.39
CDC6-204ENST00000580824 SHANK2Q9UPX8 1470 aa23.75■■□□□ 1.39
CDC6-204ENST00000580824 CROCC2H7BZ55 1655 aa23.74■■□□□ 1.39
CDC6-204ENST00000580824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
CDC6-204ENST00000580824 ADGBQ8N7X0 1667 aa23.73■■□□□ 1.39
CDC6-204ENST00000580824 AGLP35573 1532 aa23.72■■□□□ 1.39
CDC6-204ENST00000580824 ABCC5O15440 1437 aa23.71■■□□□ 1.39
CDC6-204ENST00000580824 TSPY4P0CV99 314 aa23.71■■□□□ 1.39
CDC6-204ENST00000580824 TSPY10P0CW01 314 aa23.71■■□□□ 1.39
CDC6-204ENST00000580824 MYT1LQ9UL68 1186 aa23.71■■□□□ 1.39
CDC6-204ENST00000580824 SIGLEC1Q9BZZ2 1709 aa23.7■■□□□ 1.39
CDC6-204ENST00000580824 PLXNC1O60486 1568 aa23.7■■□□□ 1.38
CDC6-204ENST00000580824 DAPK1P53355 1430 aa23.7■■□□□ 1.38
CDC6-204ENST00000580824 BCORL1Q5H9F3 1711 aa23.69■■□□□ 1.38
CDC6-204ENST00000580824 RRBP1Q9P2E9 1410 aaKnown RBP23.68■■□□□ 1.38
CDC6-204ENST00000580824 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
CDC6-204ENST00000580824 A2MP01023 1474 aa23.67■■□□□ 1.38
CDC6-204ENST00000580824 ADAMTSL3P82987 1691 aa23.65■■□□□ 1.38
CDC6-204ENST00000580824 ARID4BQ4LE39 1312 aaPredicted RBP23.63■■□□□ 1.37
CDC6-204ENST00000580824 KDM4FA0A1W2PPD8 638 aa23.62■■□□□ 1.37
CDC6-204ENST00000580824 FAM50AQ14320 339 aaKnown RBP23.62■■□□□ 1.37
CDC6-204ENST00000580824 DHX29Q7Z478 1369 aaKnown RBP23.61■■□□□ 1.37
CDC6-204ENST00000580824 ADGRL2O95490 1459 aa23.61■■□□□ 1.37
CDC6-204ENST00000580824 DUOX2Q9NRD8 1548 aa23.57■■□□□ 1.36
CDC6-204ENST00000580824 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
CDC6-204ENST00000580824 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
CDC6-204ENST00000580824 NCOA1Q15788 1441 aa23.55■■□□□ 1.36
CDC6-204ENST00000580824 MADDQ8WXG6 1647 aa23.55■■□□□ 1.36
CDC6-204ENST00000580824 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
CDC6-204ENST00000580824 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
CDC6-204ENST00000580824 FER1L4A9Z1Z3 1794 aa23.52■■□□□ 1.36
CDC6-204ENST00000580824 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
CDC6-204ENST00000580824 ERBINQ96RT1 1412 aa23.51■■□□□ 1.35
CDC6-204ENST00000580824 FAM135AQ9P2D6 1515 aa23.51■■□□□ 1.35
CDC6-204ENST00000580824 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
CDC6-204ENST00000580824 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
CDC6-204ENST00000580824 CNTLNQ9NXG0 1405 aa23.48■■□□□ 1.35
CDC6-204ENST00000580824 RIMS1Q86UR5 1692 aaKnown RBP23.47■■□□□ 1.35
CDC6-204ENST00000580824 PTPRMP28827 1452 aa23.46■■□□□ 1.35
CDC6-204ENST00000580824 MLECQ14165 292 aa23.46■■□□□ 1.35
CDC6-204ENST00000580824 CHIC2Q9UKJ5 165 aa23.45■■□□□ 1.34
CDC6-204ENST00000580824 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms