RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 GPR153Q6NV75 609 aa11.55□□□□□ -0.56
SMG8-205ENST00000580798 VGFO15240 615 aaPredicted RBP11.54□□□□□ -0.56
SMG8-205ENST00000580798 RNF166Q96A37 237 aaPredicted RBP11.53□□□□□ -0.56
SMG8-205ENST00000580798 ZNF687Q8N1G0 1237 aa11.52□□□□□ -0.57
SMG8-205ENST00000580798 MYT1LQ9UL68 1186 aa11.47□□□□□ -0.57
SMG8-205ENST00000580798 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
SMG8-205ENST00000580798 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
SMG8-205ENST00000580798 NLRP6P59044 892 aa11.43□□□□□ -0.58
SMG8-205ENST00000580798 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMG8-205ENST00000580798 BCL11BQ9C0K0 894 aaPredicted RBP11.42□□□□□ -0.58
SMG8-205ENST00000580798 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
SMG8-205ENST00000580798 PTGER2P43116 358 aa11.37□□□□□ -0.59
SMG8-205ENST00000580798 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
SMG8-205ENST00000580798 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
SMG8-205ENST00000580798 STK24Q9Y6E0 443 aa11.37□□□□□ -0.59
SMG8-205ENST00000580798 KIF3CO14782 793 aa11.35□□□□□ -0.59
SMG8-205ENST00000580798 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
SMG8-205ENST00000580798 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
SMG8-205ENST00000580798 LSM11P83369 360 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMG8-205ENST00000580798 STK25O00506 426 aa11.3□□□□□ -0.6
SMG8-205ENST00000580798 NUDT7P0C024 238 aa11.3□□□□□ -0.6
SMG8-205ENST00000580798 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
SMG8-205ENST00000580798 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
SMG8-205ENST00000580798 SLC34A2O95436 690 aa11.25□□□□□ -0.61
SMG8-205ENST00000580798 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
SMG8-205ENST00000580798 PBX2P40425 430 aa11.24□□□□□ -0.61
SMG8-205ENST00000580798 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
SMG8-205ENST00000580798 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
SMG8-205ENST00000580798 TMC2Q8TDI7 906 aa11.2□□□□□ -0.62
SMG8-205ENST00000580798 RGL2O15211 777 aa11.18□□□□□ -0.62
SMG8-205ENST00000580798 PPP1R37O75864 691 aa11.16□□□□□ -0.62
SMG8-205ENST00000580798 PKD2Q13563 968 aa11.15□□□□□ -0.62
SMG8-205ENST00000580798 KDM4FA0A1W2PPD8 638 aa11.11□□□□□ -0.63
SMG8-205ENST00000580798 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
SMG8-205ENST00000580798 ADGRD1Q6QNK2 874 aa11.11□□□□□ -0.63
SMG8-205ENST00000580798 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
SMG8-205ENST00000580798 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
SMG8-205ENST00000580798 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
SMG8-205ENST00000580798 PTCD2Q8WV60 388 aaKnown RBP11.08□□□□□ -0.64
SMG8-205ENST00000580798 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
SMG8-205ENST00000580798 PSEN2P49810 448 aa11.04□□□□□ -0.64
SMG8-205ENST00000580798 FOXK1P85037 733 aa11.04□□□□□ -0.64
SMG8-205ENST00000580798 TK2O00142 265 aa11.03□□□□□ -0.64
SMG8-205ENST00000580798 HRO43593 1189 aa11.03□□□□□ -0.64
SMG8-205ENST00000580798 PLPP6Q8IY26 295 aa11.02□□□□□ -0.65
SMG8-205ENST00000580798 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
SMG8-205ENST00000580798 DSG2Q14126 1118 aa10.98□□□□□ -0.65
SMG8-205ENST00000580798 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
SMG8-205ENST00000580798 TBC1D12O60347 775 aa10.95□□□□□ -0.66
SMG8-205ENST00000580798 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
SMG8-205ENST00000580798 HS6ST3Q8IZP7 471 aa10.93□□□□□ -0.66
SMG8-205ENST00000580798 KCNK17Q96T54 332 aa10.92□□□□□ -0.66
SMG8-205ENST00000580798 STAC3Q96MF2 364 aa10.9□□□□□ -0.66
SMG8-205ENST00000580798 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
SMG8-205ENST00000580798 VPS9D1Q9Y2B5 631 aa10.88□□□□□ -0.67
SMG8-205ENST00000580798 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
SMG8-205ENST00000580798 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMG8-205ENST00000580798 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
SMG8-205ENST00000580798 PTPN5P54829 565 aa10.83□□□□□ -0.68
SMG8-205ENST00000580798 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
SMG8-205ENST00000580798 CHGAP10645 457 aaKnown RBP10.82□□□□□ -0.68
SMG8-205ENST00000580798 NKX1-1Q15270 411 aaPredicted RBP10.82□□□□□ -0.68
SMG8-205ENST00000580798 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
SMG8-205ENST00000580798 SLC4A5Q9BY07 1137 aa10.81□□□□□ -0.68
SMG8-205ENST00000580798 BHMG1C9JSJ3 638 aaPredicted RBP10.79□□□□□ -0.68
SMG8-205ENST00000580798 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
SMG8-205ENST00000580798 FOSBP53539 338 aa10.78□□□□□ -0.68
SMG8-205ENST00000580798 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
SMG8-205ENST00000580798 PTPREP23469 700 aa10.76□□□□□ -0.69
SMG8-205ENST00000580798 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
SMG8-205ENST00000580798 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
SMG8-205ENST00000580798 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
SMG8-205ENST00000580798 IFFO2Q5TF58 517 aa10.74□□□□□ -0.69
SMG8-205ENST00000580798 ANO8Q9HCE9 1232 aaPredicted RBP10.74□□□□□ -0.69
SMG8-205ENST00000580798 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
SMG8-205ENST00000580798 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
SMG8-205ENST00000580798 GOLGA8CPA6NN73 597 aa10.71□□□□□ -0.69
SMG8-205ENST00000580798 MRPL50Q8N5N7 158 aaKnown RBP10.71□□□□□ -0.69
SMG8-205ENST00000580798 WNT2BQ93097 391 aa10.71□□□□□ -0.69
SMG8-205ENST00000580798 ADAM33Q9BZ11 813 aa10.71□□□□□ -0.69
SMG8-205ENST00000580798 EVI5O60447 810 aa10.7□□□□□ -0.7
SMG8-205ENST00000580798 RGS20O76081 388 aa10.7□□□□□ -0.7
SMG8-205ENST00000580798 PDE4AP27815 886 aa10.7□□□□□ -0.7
SMG8-205ENST00000580798 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
SMG8-205ENST00000580798 A0A0G2JS52 829 aa10.67□□□□□ -0.7
SMG8-205ENST00000580798 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
SMG8-205ENST00000580798 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
SMG8-205ENST00000580798 IRX2Q9BZI1 471 aaPredicted RBP10.64□□□□□ -0.71
SMG8-205ENST00000580798 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
SMG8-205ENST00000580798 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
SMG8-205ENST00000580798 GTPBP6O43824 516 aaPredicted RBP10.61□□□□□ -0.71
SMG8-205ENST00000580798 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
SMG8-205ENST00000580798 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
SMG8-205ENST00000580798 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
SMG8-205ENST00000580798 MFSD10Q14728 455 aa10.59□□□□□ -0.71
SMG8-205ENST00000580798 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
SMG8-205ENST00000580798 RABGEF1Q9UJ41 708 aa10.59□□□□□ -0.71
SMG8-205ENST00000580798 COL9A1P20849 921 aa10.58□□□□□ -0.72
SMG8-205ENST00000580798 ANKK1Q8NFD2 765 aa10.56□□□□□ -0.72
SMG8-205ENST00000580798 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms