RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 MAGI2Q86UL8 1455 aa32.15■■■□□ 2.74
SMG8-204ENST00000580498 ARHGEF40Q8TER5 1519 aa32.15■■■□□ 2.74
SMG8-204ENST00000580498 ZMYM4Q5VZL5 1548 aa32.14■■■□□ 2.74
SMG8-204ENST00000580498 POGZQ7Z3K3 1410 aa32.13■■■□□ 2.73
SMG8-204ENST00000580498 ZFYVE16Q7Z3T8 1539 aa32.1■■■□□ 2.73
SMG8-204ENST00000580498 MTUS2Q5JR59 1369 aa32.09■■■□□ 2.73
SMG8-204ENST00000580498 PREX2Q70Z35 1606 aa32.08■■■□□ 2.73
SMG8-204ENST00000580498 ZNF518AQ6AHZ1 1483 aa32.07■■■□□ 2.72
SMG8-204ENST00000580498 MYT1LQ9UL68 1186 aa32.06■■■□□ 2.72
SMG8-204ENST00000580498 CDC42BPBQ9Y5S2 1711 aa32.05■■■□□ 2.72
SMG8-204ENST00000580498 LOC105371045A0A1W2PR82 267 aa32.01■■■□□ 2.71
SMG8-204ENST00000580498 CDC42BPAQ5VT25 1732 aa31.99■■■□□ 2.71
SMG8-204ENST00000580498 BCORL1Q5H9F3 1711 aa31.98■■■□□ 2.71
SMG8-204ENST00000580498 CCNB3Q8WWL7 1395 aa31.97■■■□□ 2.71
SMG8-204ENST00000580498 EHBP1L1Q8N3D4 1523 aa31.96■■■□□ 2.71
SMG8-204ENST00000580498 YEATS2Q9ULM3 1422 aa31.96■■■□□ 2.71
SMG8-204ENST00000580498 ADAMTSL3P82987 1691 aa31.95■■■□□ 2.71
SMG8-204ENST00000580498 ZNF777Q9ULD5 760 aaPredicted RBP31.94■■■□□ 2.7
SMG8-204ENST00000580498 ABCC1P33527 1531 aa31.94■■■□□ 2.7
SMG8-204ENST00000580498 ATP10AO60312 1499 aa31.92■■■□□ 2.7
SMG8-204ENST00000580498 C9orf84Q5VXU9 1444 aa31.92■■■□□ 2.7
SMG8-204ENST00000580498 KDM5CP41229 1560 aa31.91■■■□□ 2.7
SMG8-204ENST00000580498 AFAP1Q8N556 730 aa31.91■■■□□ 2.7
SMG8-204ENST00000580498 CFDP1Q9UEE9 299 aaPredicted RBP31.91■■■□□ 2.7
SMG8-204ENST00000580498 HECW2Q9P2P5 1572 aa31.9■■■□□ 2.7
SMG8-204ENST00000580498 GPATCH8Q9UKJ3 1502 aaKnown RBP31.9■■■□□ 2.7
SMG8-204ENST00000580498 ITSN2Q9NZM3 1697 aa31.89■■■□□ 2.7
SMG8-204ENST00000580498 VPS8Q8N3P4 1428 aa31.89■■■□□ 2.7
SMG8-204ENST00000580498 PLEKHH2Q8IVE3 1493 aa31.89■■■□□ 2.7
SMG8-204ENST00000580498 PTPRMP28827 1452 aa31.86■■■□□ 2.69
SMG8-204ENST00000580498 MADDQ8WXG6 1647 aa31.86■■■□□ 2.69
SMG8-204ENST00000580498 MLH3Q9UHC1 1453 aa31.84■■■□□ 2.69
SMG8-204ENST00000580498 MLECQ14165 292 aa31.81■■■□□ 2.68
SMG8-204ENST00000580498 TRAPPC8Q9Y2L5 1435 aa31.81■■■□□ 2.68
SMG8-204ENST00000580498 SUPT6HQ7KZ85 1726 aaKnown RBP31.8■■■□□ 2.68
SMG8-204ENST00000580498 SAMD9LQ8IVG5 1584 aa31.8■■■□□ 2.68
SMG8-204ENST00000580498 TIAM1Q13009 1591 aa31.79■■■□□ 2.68
SMG8-204ENST00000580498 RIMS1Q86UR5 1692 aaKnown RBP31.79■■■□□ 2.68
SMG8-204ENST00000580498 KIAA1107Q9UPP5 1409 aa31.78■■■□□ 2.68
SMG8-204ENST00000580498 SYCP2Q9BX26 1530 aa31.78■■■□□ 2.68
SMG8-204ENST00000580498 ARHGEF12Q9NZN5 1544 aa31.78■■■□□ 2.68
SMG8-204ENST00000580498 APLP2Q06481 763 aa31.75■■■□□ 2.67
SMG8-204ENST00000580498 DIP2CQ9Y2E4 1556 aa31.75■■■□□ 2.67
SMG8-204ENST00000580498 SPAG9O60271 1321 aaKnown RBP31.75■■■□□ 2.67
SMG8-204ENST00000580498 FER1L4A9Z1Z3 1794 aa31.74■■■□□ 2.67
SMG8-204ENST00000580498 REREQ9P2R6 1566 aa31.74■■■□□ 2.67
SMG8-204ENST00000580498 HNRNPMP52272 730 aaKnown RBP eCLIP31.73■■■□□ 2.67
SMG8-204ENST00000580498 ABCA6Q8N139 1617 aa31.71■■■□□ 2.67
SMG8-204ENST00000580498 SIGLEC1Q9BZZ2 1709 aa31.7■■■□□ 2.67
SMG8-204ENST00000580498 ESF1Q9H501 851 aaKnown RBP31.7■■■□□ 2.67
SMG8-204ENST00000580498 NCOA2Q15596 1464 aa31.7■■■□□ 2.66
SMG8-204ENST00000580498 MAP3K1Q13233 1512 aa31.68■■■□□ 2.66
SMG8-204ENST00000580498 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
SMG8-204ENST00000580498 PLPPR3Q6T4P5 718 aa31.66■■■□□ 2.66
SMG8-204ENST00000580498 LRRC9Q6ZRR7 1453 aa31.65■■■□□ 2.66
SMG8-204ENST00000580498 AGLP35573 1532 aa31.64■■■□□ 2.66
SMG8-204ENST00000580498 ATP7AQ04656 1500 aa31.63■■■□□ 2.65
SMG8-204ENST00000580498 RSPH4AQ5TD94 716 aa31.6■■■□□ 2.65
SMG8-204ENST00000580498 INO80Q9ULG1 1556 aaPredicted RBP31.56■■■□□ 2.64
SMG8-204ENST00000580498 ZNF644Q9H582 1327 aaPredicted RBP31.56■■■□□ 2.64
SMG8-204ENST00000580498 CAMSAP2Q08AD1 1489 aa31.54■■■□□ 2.64
SMG8-204ENST00000580498 CCDC141Q6ZP82 1450 aa31.52■■■□□ 2.64
SMG8-204ENST00000580498 A2MP01023 1474 aa31.51■■■□□ 2.63
SMG8-204ENST00000580498 MBD5Q9P267 1494 aa31.51■■■□□ 2.63
SMG8-204ENST00000580498 ADGBQ8N7X0 1667 aa31.51■■■□□ 2.63
SMG8-204ENST00000580498 RTEL1-TNFRSF6BF6WH68 1400 aa31.5■■■□□ 2.63
SMG8-204ENST00000580498 CNTLNQ9NXG0 1405 aa31.5■■■□□ 2.63
SMG8-204ENST00000580498 TSPY4P0CV99 314 aa31.48■■■□□ 2.63
SMG8-204ENST00000580498 TSPY10P0CW01 314 aa31.48■■■□□ 2.63
SMG8-204ENST00000580498 KANK4Q5T7N3 995 aaPredicted RBP31.47■■■□□ 2.63
SMG8-204ENST00000580498 LMTK3Q96Q04 1460 aa31.46■■■□□ 2.63
SMG8-204ENST00000580498 MIA2Q96PC5 1412 aa31.44■■■□□ 2.62
SMG8-204ENST00000580498 MYOM3Q5VTT5 1437 aa31.43■■■□□ 2.62
SMG8-204ENST00000580498 ARHGEF5Q12774 1597 aa31.43■■■□□ 2.62
SMG8-204ENST00000580498 PLXNC1O60486 1568 aa31.42■■■□□ 2.62
SMG8-204ENST00000580498 CEBPAP49715 358 aaPredicted RBP31.4■■■□□ 2.62
SMG8-204ENST00000580498 PREX1Q8TCU6 1659 aa31.4■■■□□ 2.62
SMG8-204ENST00000580498 SETD1BQ9UPS6 1966 aaKnown RBP31.39■■■□□ 2.62
SMG8-204ENST00000580498 PPP6R1Q9UPN7 881 aa31.38■■■□□ 2.61
SMG8-204ENST00000580498 UHRF1BP1Q6BDS2 1440 aa31.36■■■□□ 2.61
SMG8-204ENST00000580498 GGT6Q6P531 493 aa31.36■■■□□ 2.61
SMG8-204ENST00000580498 C3P01024 1663 aa31.35■■■□□ 2.61
SMG8-204ENST00000580498 DHX29Q7Z478 1369 aaKnown RBP31.35■■■□□ 2.61
SMG8-204ENST00000580498 MROH2AA6NES4 1674 aa31.35■■■□□ 2.61
SMG8-204ENST00000580498 HSPA2P54652 639 aa31.29■■■□□ 2.6
SMG8-204ENST00000580498 CLTCQ00610 1675 aaKnown RBP31.26■■■□□ 2.6
SMG8-204ENST00000580498 KIF3BO15066 747 aa31.26■■■□□ 2.59
SMG8-204ENST00000580498 ZMYM3Q14202 1370 aa31.26■■■□□ 2.59
SMG8-204ENST00000580498 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.59
SMG8-204ENST00000580498 NPATQ14207 1427 aa31.24■■■□□ 2.59
SMG8-204ENST00000580498 PTPN23Q9H3S7 1636 aa31.23■■■□□ 2.59
SMG8-204ENST00000580498 FAM135AQ9P2D6 1515 aa31.21■■■□□ 2.59
SMG8-204ENST00000580498 FGD6Q6ZV73 1430 aa31.19■■■□□ 2.58
SMG8-204ENST00000580498 DMRT2Q9Y5R5 561 aa31.17■■■□□ 2.58
SMG8-204ENST00000580498 WASHC2CQ9Y4E1 1318 aa31.15■■■□□ 2.58
SMG8-204ENST00000580498 SHANK2Q9UPX8 1470 aa31.14■■■□□ 2.58
SMG8-204ENST00000580498 KDM5DQ9BY66 1539 aa31.14■■■□□ 2.57
SMG8-204ENST00000580498 TCOF1Q13428 1488 aaKnown RBP31.11■■■□□ 2.57
SMG8-204ENST00000580498 EIF2AK4Q9P2K8 1649 aaKnown RBP31.11■■■□□ 2.57
SMG8-204ENST00000580498 CROCC2H7BZ55 1655 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms