RNA–Protein interactions for RNA: ENST00000580497.1

PMP22-207, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-207ENST00000580497 PLCH2O75038 1416 aa12.82□□□□□ -0.36
PMP22-207ENST00000580497 ARHGAP5Q13017 1502 aa12.82□□□□□ -0.36
PMP22-207ENST00000580497 MIA2Q96PC5 1412 aa12.81□□□□□ -0.36
PMP22-207ENST00000580497 ARAP3Q8WWN8 1544 aa12.81□□□□□ -0.36
PMP22-207ENST00000580497 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
PMP22-207ENST00000580497 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
PMP22-207ENST00000580497 FAM69CQ0P6D2 419 aa12.79□□□□□ -0.36
PMP22-207ENST00000580497 ZNF644Q9H582 1327 aaPredicted RBP12.79□□□□□ -0.36
PMP22-207ENST00000580497 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
PMP22-207ENST00000580497 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
PMP22-207ENST00000580497 CROCC2H7BZ55 1655 aa12.77□□□□□ -0.36
PMP22-207ENST00000580497 TRIM26Q12899 539 aaPredicted RBP12.77□□□□□ -0.37
PMP22-207ENST00000580497 ABCC1P33527 1531 aa12.77□□□□□ -0.37
PMP22-207ENST00000580497 CFAP74Q9C0B2 1584 aa12.77□□□□□ -0.37
PMP22-207ENST00000580497 DNMT1P26358 1616 aaKnown RBP12.76□□□□□ -0.37
PMP22-207ENST00000580497 FANCAO15360 1455 aa12.75□□□□□ -0.37
PMP22-207ENST00000580497 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
PMP22-207ENST00000580497 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
PMP22-207ENST00000580497 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
PMP22-207ENST00000580497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
PMP22-207ENST00000580497 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
PMP22-207ENST00000580497 ARHGEF5Q12774 1597 aa12.73□□□□□ -0.37
PMP22-207ENST00000580497 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
PMP22-207ENST00000580497 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
PMP22-207ENST00000580497 PTPRKQ15262 1439 aa12.71□□□□□ -0.37
PMP22-207ENST00000580497 AKNAQ7Z591 1439 aa12.71□□□□□ -0.37
PMP22-207ENST00000580497 NEO1Q92859 1461 aa12.71□□□□□ -0.38
PMP22-207ENST00000580497 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
PMP22-207ENST00000580497 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
PMP22-207ENST00000580497 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
PMP22-207ENST00000580497 ABCC5O15440 1437 aa12.7□□□□□ -0.38
PMP22-207ENST00000580497 DAPK1P53355 1430 aa12.7□□□□□ -0.38
PMP22-207ENST00000580497 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
PMP22-207ENST00000580497 ITGAEP38570 1179 aa12.69□□□□□ -0.38
PMP22-207ENST00000580497 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.38
PMP22-207ENST00000580497 PCGF6Q9BYE7 350 aa12.69□□□□□ -0.38
PMP22-207ENST00000580497 PLEKHH2Q8IVE3 1493 aa12.69□□□□□ -0.38
PMP22-207ENST00000580497 KIAA1107Q9UPP5 1409 aa12.69□□□□□ -0.38
PMP22-207ENST00000580497 TEX14Q8IWB6 1497 aa12.68□□□□□ -0.38
PMP22-207ENST00000580497 TRAPPC8Q9Y2L5 1435 aa12.68□□□□□ -0.38
PMP22-207ENST00000580497 FRMPD1Q5SYB0 1578 aa12.68□□□□□ -0.38
PMP22-207ENST00000580497 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
PMP22-207ENST00000580497 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
PMP22-207ENST00000580497 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
PMP22-207ENST00000580497 INO80Q9ULG1 1556 aaPredicted RBP12.65□□□□□ -0.38
PMP22-207ENST00000580497 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.38
PMP22-207ENST00000580497 KDM5CP41229 1560 aa12.64□□□□□ -0.39
PMP22-207ENST00000580497 GCC2Q8IWJ2 1684 aa12.64□□□□□ -0.39
PMP22-207ENST00000580497 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
PMP22-207ENST00000580497 COL17A1Q9UMD9 1497 aaPredicted RBP12.64□□□□□ -0.39
PMP22-207ENST00000580497 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
PMP22-207ENST00000580497 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
PMP22-207ENST00000580497 ZFYVE16Q7Z3T8 1539 aa12.62□□□□□ -0.39
PMP22-207ENST00000580497 DENND4BO75064 1496 aaPredicted RBP12.62□□□□□ -0.39
PMP22-207ENST00000580497 ADGRL2O95490 1459 aa12.62□□□□□ -0.39
PMP22-207ENST00000580497 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
PMP22-207ENST00000580497 CHIC2Q9UKJ5 165 aa12.62□□□□□ -0.39
PMP22-207ENST00000580497 KDM6BO15054 1643 aa12.62□□□□□ -0.39
PMP22-207ENST00000580497 PLXNC1O60486 1568 aa12.61□□□□□ -0.39
PMP22-207ENST00000580497 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
PMP22-207ENST00000580497 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
PMP22-207ENST00000580497 ABCA6Q8N139 1617 aa12.6□□□□□ -0.39
PMP22-207ENST00000580497 RAPGEF3O95398 923 aa12.6□□□□□ -0.39
PMP22-207ENST00000580497 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
PMP22-207ENST00000580497 ATP7AQ04656 1500 aa12.6□□□□□ -0.39
PMP22-207ENST00000580497 ZMYM4Q5VZL5 1548 aa12.59□□□□□ -0.39
PMP22-207ENST00000580497 NCOA1Q15788 1441 aa12.58□□□□□ -0.4
PMP22-207ENST00000580497 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
PMP22-207ENST00000580497 NAIPQ13075 1403 aa12.57□□□□□ -0.4
PMP22-207ENST00000580497 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
PMP22-207ENST00000580497 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
PMP22-207ENST00000580497 RRP7BPQ9NSQ0 103 aa12.57□□□□□ -0.4
PMP22-207ENST00000580497 MLH3Q9UHC1 1453 aa12.57□□□□□ -0.4
PMP22-207ENST00000580497 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
PMP22-207ENST00000580497 HFM1A2PYH4 1435 aa12.56□□□□□ -0.4
PMP22-207ENST00000580497 RTEL1-TNFRSF6BF6WH68 1400 aa12.56□□□□□ -0.4
PMP22-207ENST00000580497 SPAG9O60271 1321 aaKnown RBP12.56□□□□□ -0.4
PMP22-207ENST00000580497 ANKRD30AQ9BXX3 1397 aa12.55□□□□□ -0.4
PMP22-207ENST00000580497 SIGLEC1Q9BZZ2 1709 aa12.54□□□□□ -0.4
PMP22-207ENST00000580497 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
PMP22-207ENST00000580497 KIF15Q9NS87 1388 aa12.53□□□□□ -0.4
PMP22-207ENST00000580497 YEATS2Q9ULM3 1422 aa12.53□□□□□ -0.4
PMP22-207ENST00000580497 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.4
PMP22-207ENST00000580497 RAB3GAP2Q9H2M9 1393 aa12.52□□□□□ -0.41
PMP22-207ENST00000580497 ARHGEF40Q8TER5 1519 aa12.52□□□□□ -0.41
PMP22-207ENST00000580497 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
PMP22-207ENST00000580497 MAGI2Q86UL8 1455 aa12.5□□□□□ -0.41
PMP22-207ENST00000580497 EIF2AK4Q9P2K8 1649 aaKnown RBP12.5□□□□□ -0.41
PMP22-207ENST00000580497 BCORL1Q5H9F3 1711 aa12.5□□□□□ -0.41
PMP22-207ENST00000580497 ANKRD50Q9ULJ7 1429 aa12.49□□□□□ -0.41
PMP22-207ENST00000580497 A2MP01023 1474 aa12.48□□□□□ -0.41
PMP22-207ENST00000580497 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
PMP22-207ENST00000580497 UNC13BO14795 1591 aa12.47□□□□□ -0.41
PMP22-207ENST00000580497 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
PMP22-207ENST00000580497 ERBINQ96RT1 1412 aa12.46□□□□□ -0.41
PMP22-207ENST00000580497 DHX29Q7Z478 1369 aaKnown RBP12.46□□□□□ -0.41
PMP22-207ENST00000580497 MROH1Q8NDA8 1641 aa12.46□□□□□ -0.41
PMP22-207ENST00000580497 ATP10AO60312 1499 aa12.46□□□□□ -0.42
PMP22-207ENST00000580497 RNF17Q9BXT8 1623 aaKnown RBP12.45□□□□□ -0.42
PMP22-207ENST00000580497 CEP152O94986 1710 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms