RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
LINC00271-206ENST00000579944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
LINC00271-206ENST00000579944 ZFP91Q96JP5 570 aaPredicted RBP11.86□□□□□ -0.51
LINC00271-206ENST00000579944 PTGER2P43116 358 aa11.84□□□□□ -0.51
LINC00271-206ENST00000579944 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
LINC00271-206ENST00000579944 VGFO15240 615 aaPredicted RBP11.83□□□□□ -0.52
LINC00271-206ENST00000579944 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
LINC00271-206ENST00000579944 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
LINC00271-206ENST00000579944 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
LINC00271-206ENST00000579944 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00271-206ENST00000579944 NLRP6P59044 892 aa11.75□□□□□ -0.53
LINC00271-206ENST00000579944 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00271-206ENST00000579944 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
LINC00271-206ENST00000579944 BCL11BQ9C0K0 894 aaPredicted RBP11.69□□□□□ -0.54
LINC00271-206ENST00000579944 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
LINC00271-206ENST00000579944 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
LINC00271-206ENST00000579944 NUDT7P0C024 238 aa11.65□□□□□ -0.54
LINC00271-206ENST00000579944 C2orf72A6NCS6 295 aa11.64□□□□□ -0.55
LINC00271-206ENST00000579944 KIF3CO14782 793 aa11.64□□□□□ -0.55
LINC00271-206ENST00000579944 PBX2P40425 430 aa11.64□□□□□ -0.55
LINC00271-206ENST00000579944 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
LINC00271-206ENST00000579944 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
LINC00271-206ENST00000579944 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
LINC00271-206ENST00000579944 STK25O00506 426 aa11.58□□□□□ -0.56
LINC00271-206ENST00000579944 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
LINC00271-206ENST00000579944 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.56
LINC00271-206ENST00000579944 SLC34A2O95436 690 aa11.56□□□□□ -0.56
LINC00271-206ENST00000579944 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
LINC00271-206ENST00000579944 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
LINC00271-206ENST00000579944 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
LINC00271-206ENST00000579944 ADGRD1Q6QNK2 874 aa11.5□□□□□ -0.57
LINC00271-206ENST00000579944 ARHGAP33O14559 1287 aa11.48□□□□□ -0.57
LINC00271-206ENST00000579944 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
LINC00271-206ENST00000579944 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
LINC00271-206ENST00000579944 TK2O00142 265 aa11.4□□□□□ -0.58
LINC00271-206ENST00000579944 PPP1R37O75864 691 aa11.39□□□□□ -0.59
LINC00271-206ENST00000579944 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
LINC00271-206ENST00000579944 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
LINC00271-206ENST00000579944 HRO43593 1189 aa11.38□□□□□ -0.59
LINC00271-206ENST00000579944 PSEN2P49810 448 aa11.38□□□□□ -0.59
LINC00271-206ENST00000579944 PTCD2Q8WV60 388 aaKnown RBP11.38□□□□□ -0.59
LINC00271-206ENST00000579944 RGL2O15211 777 aa11.37□□□□□ -0.59
LINC00271-206ENST00000579944 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
LINC00271-206ENST00000579944 KCTD12Q96CX2 325 aaKnown RBP11.34□□□□□ -0.59
LINC00271-206ENST00000579944 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
LINC00271-206ENST00000579944 FOXK1P85037 733 aa11.33□□□□□ -0.6
LINC00271-206ENST00000579944 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
LINC00271-206ENST00000579944 PKD2Q13563 968 aa11.31□□□□□ -0.6
LINC00271-206ENST00000579944 TBC1D12O60347 775 aa11.3□□□□□ -0.6
LINC00271-206ENST00000579944 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
LINC00271-206ENST00000579944 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
LINC00271-206ENST00000579944 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
LINC00271-206ENST00000579944 DSG2Q14126 1118 aa11.26□□□□□ -0.61
LINC00271-206ENST00000579944 PTPN5P54829 565 aa11.22□□□□□ -0.61
LINC00271-206ENST00000579944 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.61
LINC00271-206ENST00000579944 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
LINC00271-206ENST00000579944 UPF1Q92900 1129 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC00271-206ENST00000579944 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
LINC00271-206ENST00000579944 OXER1Q8TDS5 423 aa11.15□□□□□ -0.62
LINC00271-206ENST00000579944 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
LINC00271-206ENST00000579944 RGS20O76081 388 aa11.14□□□□□ -0.63
LINC00271-206ENST00000579944 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
LINC00271-206ENST00000579944 SLC4A5Q9BY07 1137 aa11.14□□□□□ -0.63
LINC00271-206ENST00000579944 THSD4Q6ZMP0 1018 aa11.12□□□□□ -0.63
LINC00271-206ENST00000579944 GOLGA8CPA6NN73 597 aa11.11□□□□□ -0.63
LINC00271-206ENST00000579944 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
LINC00271-206ENST00000579944 PTPREP23469 700 aa11.11□□□□□ -0.63
LINC00271-206ENST00000579944 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
LINC00271-206ENST00000579944 WNT2BQ93097 391 aa11.09□□□□□ -0.63
LINC00271-206ENST00000579944 IRX2Q9BZI1 471 aaPredicted RBP11.09□□□□□ -0.63
LINC00271-206ENST00000579944 A0A0G2JS52 829 aa11.08□□□□□ -0.64
LINC00271-206ENST00000579944 FOSBP53539 338 aa11.08□□□□□ -0.64
LINC00271-206ENST00000579944 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
LINC00271-206ENST00000579944 PPP1R15BQ5SWA1 713 aa11.06□□□□□ -0.64
LINC00271-206ENST00000579944 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
LINC00271-206ENST00000579944 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
LINC00271-206ENST00000579944 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
LINC00271-206ENST00000579944 NBPF3Q9H094 633 aa11.03□□□□□ -0.64
LINC00271-206ENST00000579944 ZDHHC16Q969W1 377 aa11.01□□□□□ -0.65
LINC00271-206ENST00000579944 RYDENQ9NUL5 291 aaKnown RBP11.01□□□□□ -0.65
LINC00271-206ENST00000579944 EVI5O60447 810 aa11□□□□□ -0.65
LINC00271-206ENST00000579944 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
LINC00271-206ENST00000579944 ADAM33Q9BZ11 813 aa10.99□□□□□ -0.65
LINC00271-206ENST00000579944 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
LINC00271-206ENST00000579944 PDE4AP27815 886 aa10.97□□□□□ -0.65
LINC00271-206ENST00000579944 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
LINC00271-206ENST00000579944 DNAJC5Q9H3Z4 198 aa10.96□□□□□ -0.65
LINC00271-206ENST00000579944 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
LINC00271-206ENST00000579944 ANKK1Q8NFD2 765 aa10.92□□□□□ -0.66
LINC00271-206ENST00000579944 RABGEF1Q9UJ41 708 aa10.92□□□□□ -0.66
LINC00271-206ENST00000579944 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
LINC00271-206ENST00000579944 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
LINC00271-206ENST00000579944 PROX2Q3B8N5 592 aa10.89□□□□□ -0.67
LINC00271-206ENST00000579944 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
LINC00271-206ENST00000579944 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
LINC00271-206ENST00000579944 BCAMP50895 628 aa10.87□□□□□ -0.67
LINC00271-206ENST00000579944 PCDHGA10Q9Y5H3 936 aa10.87□□□□□ -0.67
LINC00271-206ENST00000579944 COL9A1P20849 921 aa10.86□□□□□ -0.67
LINC00271-206ENST00000579944 Q6ZNB5 142 aa10.85□□□□□ -0.67
LINC00271-206ENST00000579944 SOWAHBA6NEL2 793 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms