RNA–Protein interactions for RNA: ENST00000579916.5

CCDC178-208, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 1,017 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-208ENST00000579916 EMP3P54852 163 aa11.79□□□□□ -0.52
CCDC178-208ENST00000579916 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
CCDC178-208ENST00000579916 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
CCDC178-208ENST00000579916 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
CCDC178-208ENST00000579916 FAM205CA6NFA0 338 aa11.74□□□□□ -0.53
CCDC178-208ENST00000579916 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
CCDC178-208ENST00000579916 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
CCDC178-208ENST00000579916 G3V3G9 751 aa11.72□□□□□ -0.53
CCDC178-208ENST00000579916 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
CCDC178-208ENST00000579916 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
CCDC178-208ENST00000579916 BBXQ8WY36 941 aaPredicted RBP11.69□□□□□ -0.54
CCDC178-208ENST00000579916 PPP1R37O75864 691 aa11.68□□□□□ -0.54
CCDC178-208ENST00000579916 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
CCDC178-208ENST00000579916 TMEM92Q6UXU6 159 aa11.61□□□□□ -0.55
CCDC178-208ENST00000579916 KIF3CO14782 793 aa11.56□□□□□ -0.56
CCDC178-208ENST00000579916 HOXB3P14651 431 aaPredicted RBP11.56□□□□□ -0.56
CCDC178-208ENST00000579916 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
CCDC178-208ENST00000579916 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
CCDC178-208ENST00000579916 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
CCDC178-208ENST00000579916 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
CCDC178-208ENST00000579916 ERBB3P21860 1342 aa11.46□□□□□ -0.57
CCDC178-208ENST00000579916 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
CCDC178-208ENST00000579916 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
CCDC178-208ENST00000579916 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
CCDC178-208ENST00000579916 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
CCDC178-208ENST00000579916 GPHNQ9NQX3 736 aaPredicted RBP11.45□□□□□ -0.58
CCDC178-208ENST00000579916 PAXIP1Q6ZW49 1069 aaPredicted RBP11.44□□□□□ -0.58
CCDC178-208ENST00000579916 FOXK1P85037 733 aa11.42□□□□□ -0.58
CCDC178-208ENST00000579916 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
CCDC178-208ENST00000579916 NCKAP5LQ9HCH0 1330 aa11.41□□□□□ -0.58
CCDC178-208ENST00000579916 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
CCDC178-208ENST00000579916 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
CCDC178-208ENST00000579916 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
CCDC178-208ENST00000579916 PDE4AP27815 886 aa11.38□□□□□ -0.59
CCDC178-208ENST00000579916 SLC34A2O95436 690 aa11.37□□□□□ -0.59
CCDC178-208ENST00000579916 DSG2Q14126 1118 aa11.37□□□□□ -0.59
CCDC178-208ENST00000579916 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
CCDC178-208ENST00000579916 MFSD10Q14728 455 aa11.36□□□□□ -0.59
CCDC178-208ENST00000579916 MYT1LQ9UL68 1186 aa11.36□□□□□ -0.59
CCDC178-208ENST00000579916 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
CCDC178-208ENST00000579916 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
CCDC178-208ENST00000579916 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
CCDC178-208ENST00000579916 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
CCDC178-208ENST00000579916 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
CCDC178-208ENST00000579916 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
CCDC178-208ENST00000579916 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
CCDC178-208ENST00000579916 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
CCDC178-208ENST00000579916 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
CCDC178-208ENST00000579916 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
CCDC178-208ENST00000579916 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
CCDC178-208ENST00000579916 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
CCDC178-208ENST00000579916 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
CCDC178-208ENST00000579916 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
CCDC178-208ENST00000579916 NISCHQ9Y2I1 1504 aa11.21□□□□□ -0.61
CCDC178-208ENST00000579916 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
CCDC178-208ENST00000579916 ANKRD13DQ6ZTN6 518 aa11.21□□□□□ -0.61
CCDC178-208ENST00000579916 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC178-208ENST00000579916 TBC1D12O60347 775 aa11.17□□□□□ -0.62
CCDC178-208ENST00000579916 NUDT7P0C024 238 aa11.16□□□□□ -0.62
CCDC178-208ENST00000579916 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
CCDC178-208ENST00000579916 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
CCDC178-208ENST00000579916 PTGER2P43116 358 aa11.14□□□□□ -0.63
CCDC178-208ENST00000579916 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC178-208ENST00000579916 WDR70Q9NW82 654 aa11.1□□□□□ -0.63
CCDC178-208ENST00000579916 LHX6Q9UPM6 363 aa11.1□□□□□ -0.63
CCDC178-208ENST00000579916 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
CCDC178-208ENST00000579916 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC178-208ENST00000579916 E2F4Q16254 413 aa11.09□□□□□ -0.63
CCDC178-208ENST00000579916 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
CCDC178-208ENST00000579916 PSDA5PKW4 1024 aaPredicted RBP11.07□□□□□ -0.64
CCDC178-208ENST00000579916 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
CCDC178-208ENST00000579916 EVI5O60447 810 aa11.05□□□□□ -0.64
CCDC178-208ENST00000579916 HAP1P54257 671 aaPredicted RBP11.04□□□□□ -0.64
CCDC178-208ENST00000579916 DPYSL4O14531 572 aa11.03□□□□□ -0.64
CCDC178-208ENST00000579916 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
CCDC178-208ENST00000579916 PDIA6Q15084 440 aa11.01□□□□□ -0.65
CCDC178-208ENST00000579916 POTEEQ6S8J3 1075 aa11.01□□□□□ -0.65
CCDC178-208ENST00000579916 AXIN2Q9Y2T1 843 aa11.01□□□□□ -0.65
CCDC178-208ENST00000579916 FOSBP53539 338 aa10.99□□□□□ -0.65
CCDC178-208ENST00000579916 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
CCDC178-208ENST00000579916 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
CCDC178-208ENST00000579916 PBX2P40425 430 aa10.97□□□□□ -0.65
CCDC178-208ENST00000579916 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
CCDC178-208ENST00000579916 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
CCDC178-208ENST00000579916 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
CCDC178-208ENST00000579916 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
CCDC178-208ENST00000579916 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
CCDC178-208ENST00000579916 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
CCDC178-208ENST00000579916 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
CCDC178-208ENST00000579916 PHF14O94880 888 aa10.93□□□□□ -0.66
CCDC178-208ENST00000579916 HCSTQ9UBK5 93 aa10.93□□□□□ -0.66
CCDC178-208ENST00000579916 PCDHGA10Q9Y5H3 936 aa10.92□□□□□ -0.66
CCDC178-208ENST00000579916 BCL2L12Q9HB09 334 aa10.91□□□□□ -0.66
CCDC178-208ENST00000579916 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
CCDC178-208ENST00000579916 ZDHHC16Q969W1 377 aa10.9□□□□□ -0.66
CCDC178-208ENST00000579916 EPAS1Q99814 870 aa10.89□□□□□ -0.67
CCDC178-208ENST00000579916 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
CCDC178-208ENST00000579916 TYW1BQ6NUM6 668 aa10.87□□□□□ -0.67
CCDC178-208ENST00000579916 ADAM33Q9BZ11 813 aa10.87□□□□□ -0.67
CCDC178-208ENST00000579916 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms