RNA–Protein interactions for RNA: ENST00000579589.1

RAB11FIP4-204, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-204ENST00000579589 CDK11AQ9UQ88 783 aaPredicted RBP31.96■■■□□ 2.71
RAB11FIP4-204ENST00000579589 PREX2Q70Z35 1606 aa31.96■■■□□ 2.71
RAB11FIP4-204ENST00000579589 ARHGEF40Q8TER5 1519 aa31.95■■■□□ 2.71
RAB11FIP4-204ENST00000579589 POGZQ7Z3K3 1410 aa31.88■■■□□ 2.69
RAB11FIP4-204ENST00000579589 ADAMTSL3P82987 1691 aa31.88■■■□□ 2.69
RAB11FIP4-204ENST00000579589 SCAPERQ9BY12 1400 aa31.87■■■□□ 2.69
RAB11FIP4-204ENST00000579589 YEATS2Q9ULM3 1422 aa31.87■■■□□ 2.69
RAB11FIP4-204ENST00000579589 ARHGAP5Q13017 1502 aa31.86■■■□□ 2.69
RAB11FIP4-204ENST00000579589 BCORL1Q5H9F3 1711 aa31.84■■■□□ 2.69
RAB11FIP4-204ENST00000579589 ARHGEF12Q9NZN5 1544 aa31.84■■■□□ 2.69
RAB11FIP4-204ENST00000579589 ITSN2Q9NZM3 1697 aa31.81■■■□□ 2.68
RAB11FIP4-204ENST00000579589 ZFYVE16Q7Z3T8 1539 aa31.8■■■□□ 2.68
RAB11FIP4-204ENST00000579589 KDM5CP41229 1560 aa31.8■■■□□ 2.68
RAB11FIP4-204ENST00000579589 ABCC1P33527 1531 aa31.8■■■□□ 2.68
RAB11FIP4-204ENST00000579589 EFCAB2Q5VUJ9 269 aa31.77■■■□□ 2.68
RAB11FIP4-204ENST00000579589 SAMD9LQ8IVG5 1584 aa31.77■■■□□ 2.68
RAB11FIP4-204ENST00000579589 GPATCH8Q9UKJ3 1502 aaKnown RBP31.75■■■□□ 2.67
RAB11FIP4-204ENST00000579589 MADDQ8WXG6 1647 aa31.74■■■□□ 2.67
RAB11FIP4-204ENST00000579589 MAGI2Q86UL8 1455 aa31.72■■■□□ 2.67
RAB11FIP4-204ENST00000579589 TRAPPC8Q9Y2L5 1435 aa31.71■■■□□ 2.67
RAB11FIP4-204ENST00000579589 TIAM1Q13009 1591 aa31.7■■■□□ 2.67
RAB11FIP4-204ENST00000579589 EHBP1L1Q8N3D4 1523 aa31.7■■■□□ 2.66
RAB11FIP4-204ENST00000579589 ABCA6Q8N139 1617 aa31.68■■■□□ 2.66
RAB11FIP4-204ENST00000579589 ZNF518AQ6AHZ1 1483 aa31.67■■■□□ 2.66
RAB11FIP4-204ENST00000579589 AFAP1Q8N556 730 aa31.67■■■□□ 2.66
RAB11FIP4-204ENST00000579589 HECW2Q9P2P5 1572 aa31.67■■■□□ 2.66
RAB11FIP4-204ENST00000579589 DIP2CQ9Y2E4 1556 aa31.66■■■□□ 2.66
RAB11FIP4-204ENST00000579589 VPS8Q8N3P4 1428 aa31.66■■■□□ 2.66
RAB11FIP4-204ENST00000579589 KIDINS220Q9ULH0 1771 aa31.65■■■□□ 2.66
RAB11FIP4-204ENST00000579589 RIMS1Q86UR5 1692 aaKnown RBP31.63■■■□□ 2.65
RAB11FIP4-204ENST00000579589 MTUS2Q5JR59 1369 aa31.62■■■□□ 2.65
RAB11FIP4-204ENST00000579589 SYCP2Q9BX26 1530 aa31.62■■■□□ 2.65
RAB11FIP4-204ENST00000579589 PTPRMP28827 1452 aa31.6■■■□□ 2.65
RAB11FIP4-204ENST00000579589 ATP10AO60312 1499 aa31.59■■■□□ 2.65
RAB11FIP4-204ENST00000579589 MLH3Q9UHC1 1453 aa31.57■■■□□ 2.64
RAB11FIP4-204ENST00000579589 C9orf84Q5VXU9 1444 aa31.55■■■□□ 2.64
RAB11FIP4-204ENST00000579589 FER1L4A9Z1Z3 1794 aa31.54■■■□□ 2.64
RAB11FIP4-204ENST00000579589 SUPT6HQ7KZ85 1726 aaKnown RBP31.54■■■□□ 2.64
RAB11FIP4-204ENST00000579589 ARID4BQ4LE39 1312 aaPredicted RBP31.52■■■□□ 2.64
RAB11FIP4-204ENST00000579589 REREQ9P2R6 1566 aa31.52■■■□□ 2.64
RAB11FIP4-204ENST00000579589 CCNB3Q8WWL7 1395 aa31.52■■■□□ 2.64
RAB11FIP4-204ENST00000579589 NCOA2Q15596 1464 aa31.52■■■□□ 2.64
RAB11FIP4-204ENST00000579589 ZNF644Q9H582 1327 aaPredicted RBP31.49■■■□□ 2.63
RAB11FIP4-204ENST00000579589 INO80Q9ULG1 1556 aaPredicted RBP31.48■■■□□ 2.63
RAB11FIP4-204ENST00000579589 ZNF777Q9ULD5 760 aaPredicted RBP31.48■■■□□ 2.63
RAB11FIP4-204ENST00000579589 LRRC9Q6ZRR7 1453 aa31.47■■■□□ 2.63
RAB11FIP4-204ENST00000579589 HNRNPMP52272 730 aaKnown RBP eCLIP31.46■■■□□ 2.635e-6■■■■□ 22
RAB11FIP4-204ENST00000579589 KIAA1107Q9UPP5 1409 aa31.45■■■□□ 2.63
RAB11FIP4-204ENST00000579589 MBD5Q9P267 1494 aa31.44■■■□□ 2.62
RAB11FIP4-204ENST00000579589 MAP3K1Q13233 1512 aa31.44■■■□□ 2.62
RAB11FIP4-204ENST00000579589 KANK4Q5T7N3 995 aaPredicted RBP31.43■■■□□ 2.62
RAB11FIP4-204ENST00000579589 CFDP1Q9UEE9 299 aaPredicted RBP31.43■■■□□ 2.62
RAB11FIP4-204ENST00000579589 MLECQ14165 292 aa31.4■■■□□ 2.62
RAB11FIP4-204ENST00000579589 ATP7AQ04656 1500 aa31.39■■■□□ 2.62
RAB11FIP4-204ENST00000579589 PLEKHH2Q8IVE3 1493 aa31.39■■■□□ 2.62
RAB11FIP4-204ENST00000579589 AGLP35573 1532 aa31.39■■■□□ 2.61
RAB11FIP4-204ENST00000579589 PLXNC1O60486 1568 aa31.35■■■□□ 2.61
RAB11FIP4-204ENST00000579589 CAMSAP2Q08AD1 1489 aa31.35■■■□□ 2.61
RAB11FIP4-204ENST00000579589 ADGBQ8N7X0 1667 aa31.32■■■□□ 2.6
RAB11FIP4-204ENST00000579589 LMTK3Q96Q04 1460 aa31.32■■■□□ 2.6
RAB11FIP4-204ENST00000579589 SPAG9O60271 1321 aaKnown RBP31.28■■■□□ 2.6
RAB11FIP4-204ENST00000579589 APLP2Q06481 763 aa31.28■■■□□ 2.6
RAB11FIP4-204ENST00000579589 MYT1LQ9UL68 1186 aa31.27■■■□□ 2.6
RAB11FIP4-204ENST00000579589 C3P01024 1663 aa31.27■■■□□ 2.6
RAB11FIP4-204ENST00000579589 ARHGEF5Q12774 1597 aa31.23■■■□□ 2.59
RAB11FIP4-204ENST00000579589 A2MP01023 1474 aa31.21■■■□□ 2.59
RAB11FIP4-204ENST00000579589 CCDC141Q6ZP82 1450 aa31.21■■■□□ 2.59
RAB11FIP4-204ENST00000579589 PLPPR3Q6T4P5 718 aa31.2■■■□□ 2.59
RAB11FIP4-204ENST00000579589 CEBPAP49715 358 aaPredicted RBP31.19■■■□□ 2.58
RAB11FIP4-204ENST00000579589 MYOM3Q5VTT5 1437 aa31.16■■■□□ 2.58
RAB11FIP4-204ENST00000579589 RTEL1-TNFRSF6BF6WH68 1400 aa31.15■■■□□ 2.58
RAB11FIP4-204ENST00000579589 PREX1Q8TCU6 1659 aa31.14■■■□□ 2.58
RAB11FIP4-204ENST00000579589 MROH2AA6NES4 1674 aa31.13■■■□□ 2.57
RAB11FIP4-204ENST00000579589 CLTCQ00610 1675 aaKnown RBP31.13■■■□□ 2.57
RAB11FIP4-204ENST00000579589 MAST1Q9Y2H9 1570 aa31.1■■■□□ 2.57
RAB11FIP4-204ENST00000579589 SETD1BQ9UPS6 1966 aaKnown RBP31.08■■■□□ 2.57
RAB11FIP4-204ENST00000579589 MIA2Q96PC5 1412 aa31.08■■■□□ 2.57
RAB11FIP4-204ENST00000579589 CROCC2H7BZ55 1655 aa31.07■■■□□ 2.56
RAB11FIP4-204ENST00000579589 PTPN23Q9H3S7 1636 aa31.07■■■□□ 2.56
RAB11FIP4-204ENST00000579589 HSPA2P54652 639 aa31.05■■■□□ 2.56
RAB11FIP4-204ENST00000579589 DHX29Q7Z478 1369 aaKnown RBP31.02■■■□□ 2.56
RAB11FIP4-204ENST00000579589 RSPH4AQ5TD94 716 aa31■■■□□ 2.55
RAB11FIP4-204ENST00000579589 TCOF1Q13428 1488 aaKnown RBP30.99■■■□□ 2.55
RAB11FIP4-204ENST00000579589 STRCQ7RTU9 1775 aa30.99■■■□□ 2.55
RAB11FIP4-204ENST00000579589 CNTLNQ9NXG0 1405 aa30.98■■■□□ 2.55
RAB11FIP4-204ENST00000579589 FGD6Q6ZV73 1430 aa30.97■■■□□ 2.55
RAB11FIP4-204ENST00000579589 DNMT1P26358 1616 aaKnown RBP30.95■■■□□ 2.55
RAB11FIP4-204ENST00000579589 ABCC5O15440 1437 aa30.95■■■□□ 2.54
RAB11FIP4-204ENST00000579589 MROH1Q8NDA8 1641 aa30.94■■■□□ 2.54
RAB11FIP4-204ENST00000579589 ZMYM3Q14202 1370 aa30.93■■■□□ 2.54
RAB11FIP4-204ENST00000579589 RNF17Q9BXT8 1623 aaKnown RBP30.92■■■□□ 2.54
RAB11FIP4-204ENST00000579589 GGT6Q6P531 493 aa30.92■■■□□ 2.54
RAB11FIP4-204ENST00000579589 PTPRKQ15262 1439 aa30.89■■■□□ 2.53
RAB11FIP4-204ENST00000579589 MYO3AQ8NEV4 1616 aa30.87■■■□□ 2.53
RAB11FIP4-204ENST00000579589 UHRF1BP1Q6BDS2 1440 aa30.87■■■□□ 2.53
RAB11FIP4-204ENST00000579589 SHANK2Q9UPX8 1470 aa30.87■■■□□ 2.53
RAB11FIP4-204ENST00000579589 EIF2AK4Q9P2K8 1649 aaKnown RBP30.87■■■□□ 2.53
RAB11FIP4-204ENST00000579589 DAPK1P53355 1430 aa30.86■■■□□ 2.53
RAB11FIP4-204ENST00000579589 NPATQ14207 1427 aa30.85■■■□□ 2.53
RAB11FIP4-204ENST00000579589 KIF3BO15066 747 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms