RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
SLC6A4-205ENST00000579221 ARHGAP5Q13017 1502 aa24.11■■□□□ 1.45
SLC6A4-205ENST00000579221 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
SLC6A4-205ENST00000579221 ZNF777Q9ULD5 760 aaPredicted RBP24.1■■□□□ 1.45
SLC6A4-205ENST00000579221 CFAP74Q9C0B2 1584 aa24.08■■□□□ 1.44
SLC6A4-205ENST00000579221 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
SLC6A4-205ENST00000579221 CDC42BPAQ5VT25 1732 aa24.04■■□□□ 1.44
SLC6A4-205ENST00000579221 CDC42BPBQ9Y5S2 1711 aa24.04■■□□□ 1.44
SLC6A4-205ENST00000579221 KDM6BO15054 1643 aa24.02■■□□□ 1.44
SLC6A4-205ENST00000579221 SCAPERQ9BY12 1400 aa24.01■■□□□ 1.43
SLC6A4-205ENST00000579221 ADGRL1O94910 1474 aa24.01■■□□□ 1.43
SLC6A4-205ENST00000579221 COL17A1Q9UMD9 1497 aaPredicted RBP24.01■■□□□ 1.43
SLC6A4-205ENST00000579221 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
SLC6A4-205ENST00000579221 ITSN2Q9NZM3 1697 aa24■■□□□ 1.43
SLC6A4-205ENST00000579221 RAPGEF3O95398 923 aa24■■□□□ 1.43
SLC6A4-205ENST00000579221 DENND4BO75064 1496 aaPredicted RBP24■■□□□ 1.43
SLC6A4-205ENST00000579221 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
SLC6A4-205ENST00000579221 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
SLC6A4-205ENST00000579221 HNRNPMP52272 730 aaKnown RBP eCLIP23.97■■□□□ 1.43
SLC6A4-205ENST00000579221 PLEKHH2Q8IVE3 1493 aa23.97■■□□□ 1.43
SLC6A4-205ENST00000579221 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
SLC6A4-205ENST00000579221 RSPH4AQ5TD94 716 aa23.93■■□□□ 1.42
SLC6A4-205ENST00000579221 SAMD9LQ8IVG5 1584 aa23.92■■□□□ 1.42
SLC6A4-205ENST00000579221 AFAP1Q8N556 730 aa23.92■■□□□ 1.42
SLC6A4-205ENST00000579221 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
SLC6A4-205ENST00000579221 ABCC1P33527 1531 aa23.9■■□□□ 1.42
SLC6A4-205ENST00000579221 FGD6Q6ZV73 1430 aa23.9■■□□□ 1.42
SLC6A4-205ENST00000579221 POGZQ7Z3K3 1410 aa23.9■■□□□ 1.42
SLC6A4-205ENST00000579221 ARHGEF12Q9NZN5 1544 aa23.89■■□□□ 1.42
SLC6A4-205ENST00000579221 CAMSAP2Q08AD1 1489 aa23.88■■□□□ 1.41
SLC6A4-205ENST00000579221 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
SLC6A4-205ENST00000579221 ZNF518AQ6AHZ1 1483 aa23.87■■□□□ 1.41
SLC6A4-205ENST00000579221 TRAPPC8Q9Y2L5 1435 aa23.87■■□□□ 1.41
SLC6A4-205ENST00000579221 SYCP2Q9BX26 1530 aa23.85■■□□□ 1.41
SLC6A4-205ENST00000579221 FAM50AQ14320 339 aaKnown RBP23.85■■□□□ 1.41
SLC6A4-205ENST00000579221 MBD5Q9P267 1494 aa23.84■■□□□ 1.41
SLC6A4-205ENST00000579221 TSPY4P0CV99 314 aa23.83■■□□□ 1.41
SLC6A4-205ENST00000579221 TSPY10P0CW01 314 aa23.83■■□□□ 1.41
SLC6A4-205ENST00000579221 SPAG9O60271 1321 aaKnown RBP23.83■■□□□ 1.4
SLC6A4-205ENST00000579221 FRMPD1Q5SYB0 1578 aa23.82■■□□□ 1.4
SLC6A4-205ENST00000579221 RICTORQ6R327 1708 aa23.82■■□□□ 1.4
SLC6A4-205ENST00000579221 PTPN23Q9H3S7 1636 aa23.82■■□□□ 1.4
SLC6A4-205ENST00000579221 TCOF1Q13428 1488 aaKnown RBP23.81■■□□□ 1.4
SLC6A4-205ENST00000579221 MAGI2Q86UL8 1455 aa23.81■■□□□ 1.4
SLC6A4-205ENST00000579221 ZMYM4Q5VZL5 1548 aa23.78■■□□□ 1.4
SLC6A4-205ENST00000579221 CCDC141Q6ZP82 1450 aa23.77■■□□□ 1.4
SLC6A4-205ENST00000579221 MLH3Q9UHC1 1453 aa23.77■■□□□ 1.4
SLC6A4-205ENST00000579221 KDM5CP41229 1560 aa23.77■■□□□ 1.4
SLC6A4-205ENST00000579221 ARHGEF5Q12774 1597 aa23.76■■□□□ 1.39
SLC6A4-205ENST00000579221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.74■■□□□ 1.39
SLC6A4-205ENST00000579221 RTEL1-TNFRSF6BF6WH68 1400 aa23.72■■□□□ 1.39
SLC6A4-205ENST00000579221 RRBP1Q9P2E9 1410 aaKnown RBP23.72■■□□□ 1.39
SLC6A4-205ENST00000579221 YEATS2Q9ULM3 1422 aa23.72■■□□□ 1.39
SLC6A4-205ENST00000579221 ZFYVE16Q7Z3T8 1539 aa23.72■■□□□ 1.39
SLC6A4-205ENST00000579221 ABCC5O15440 1437 aa23.71■■□□□ 1.39
SLC6A4-205ENST00000579221 HECW2Q9P2P5 1572 aa23.7■■□□□ 1.38
SLC6A4-205ENST00000579221 DAPK1P53355 1430 aa23.69■■□□□ 1.38
SLC6A4-205ENST00000579221 ATP10AO60312 1499 aa23.68■■□□□ 1.38
SLC6A4-205ENST00000579221 ATP7AQ04656 1500 aa23.66■■□□□ 1.38
SLC6A4-205ENST00000579221 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
SLC6A4-205ENST00000579221 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
SLC6A4-205ENST00000579221 ITGAEP38570 1179 aa23.65■■□□□ 1.38
SLC6A4-205ENST00000579221 DNMT1P26358 1616 aaKnown RBP23.65■■□□□ 1.38
SLC6A4-205ENST00000579221 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.38
SLC6A4-205ENST00000579221 ARID4BQ4LE39 1312 aaPredicted RBP23.64■■□□□ 1.38
SLC6A4-205ENST00000579221 KIDINS220Q9ULH0 1771 aa23.64■■□□□ 1.37
SLC6A4-205ENST00000579221 INO80Q9ULG1 1556 aaPredicted RBP23.62■■□□□ 1.37
SLC6A4-205ENST00000579221 SHANK2Q9UPX8 1470 aa23.62■■□□□ 1.37
SLC6A4-205ENST00000579221 MAST1Q9Y2H9 1570 aa23.61■■□□□ 1.37
SLC6A4-205ENST00000579221 ANKRD30AQ9BXX3 1397 aa23.6■■□□□ 1.37
SLC6A4-205ENST00000579221 DIP2CQ9Y2E4 1556 aa23.6■■□□□ 1.37
SLC6A4-205ENST00000579221 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
SLC6A4-205ENST00000579221 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
SLC6A4-205ENST00000579221 ABCA6Q8N139 1617 aa23.58■■□□□ 1.36
SLC6A4-205ENST00000579221 A2MP01023 1474 aa23.57■■□□□ 1.36
SLC6A4-205ENST00000579221 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
SLC6A4-205ENST00000579221 CROCC2H7BZ55 1655 aa23.54■■□□□ 1.36
SLC6A4-205ENST00000579221 REREQ9P2R6 1566 aa23.54■■□□□ 1.36
SLC6A4-205ENST00000579221 NCOA1Q15788 1441 aa23.54■■□□□ 1.36
SLC6A4-205ENST00000579221 KIF15Q9NS87 1388 aa23.52■■□□□ 1.36
SLC6A4-205ENST00000579221 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
SLC6A4-205ENST00000579221 ADGBQ8N7X0 1667 aa23.51■■□□□ 1.35
SLC6A4-205ENST00000579221 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
SLC6A4-205ENST00000579221 MLECQ14165 292 aa23.51■■□□□ 1.35
SLC6A4-205ENST00000579221 AGLP35573 1532 aa23.5■■□□□ 1.35
SLC6A4-205ENST00000579221 PLXNC1O60486 1568 aa23.5■■□□□ 1.35
SLC6A4-205ENST00000579221 KIF3BO15066 747 aa23.49■■□□□ 1.35
SLC6A4-205ENST00000579221 DUOX2Q9NRD8 1548 aa23.48■■□□□ 1.35
SLC6A4-205ENST00000579221 GGT6Q6P531 493 aa23.46■■□□□ 1.35
SLC6A4-205ENST00000579221 KDM4FA0A1W2PPD8 638 aa23.43■■□□□ 1.34
SLC6A4-205ENST00000579221 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
SLC6A4-205ENST00000579221 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
SLC6A4-205ENST00000579221 ESF1Q9H501 851 aaKnown RBP23.42■■□□□ 1.34
SLC6A4-205ENST00000579221 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
SLC6A4-205ENST00000579221 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
SLC6A4-205ENST00000579221 BCORL1Q5H9F3 1711 aa23.39■■□□□ 1.33
SLC6A4-205ENST00000579221 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
SLC6A4-205ENST00000579221 EIF2AK4Q9P2K8 1649 aaKnown RBP23.34■■□□□ 1.33
SLC6A4-205ENST00000579221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.34■■□□□ 1.33
SLC6A4-205ENST00000579221 ADAMTSL3P82987 1691 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms