RNA–Protein interactions for RNA: ENST00000579021.1

RTTN-203, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-203ENST00000579021 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTTN-203ENST00000579021 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTTN-203ENST00000579021 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
RTTN-203ENST00000579021 SOX12O15370 315 aa11.02□□□□□ -0.65
RTTN-203ENST00000579021 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
RTTN-203ENST00000579021 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
RTTN-203ENST00000579021 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
RTTN-203ENST00000579021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
RTTN-203ENST00000579021 ZFP91Q96JP5 570 aaPredicted RBP10.94□□□□□ -0.66
RTTN-203ENST00000579021 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
RTTN-203ENST00000579021 PBX2P40425 430 aa10.92□□□□□ -0.66
RTTN-203ENST00000579021 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
RTTN-203ENST00000579021 NUDT7P0C024 238 aa10.9□□□□□ -0.66
RTTN-203ENST00000579021 POTEEQ6S8J3 1075 aa10.89□□□□□ -0.67
RTTN-203ENST00000579021 AXIN2Q9Y2T1 843 aa10.89□□□□□ -0.67
RTTN-203ENST00000579021 VGFO15240 615 aaPredicted RBP10.88□□□□□ -0.67
RTTN-203ENST00000579021 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
RTTN-203ENST00000579021 LHX6Q9UPM6 363 aa10.87□□□□□ -0.67
RTTN-203ENST00000579021 NLRP6P59044 892 aa10.86□□□□□ -0.67
RTTN-203ENST00000579021 C2orf72A6NCS6 295 aa10.83□□□□□ -0.68
RTTN-203ENST00000579021 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
RTTN-203ENST00000579021 KIF3CO14782 793 aa10.82□□□□□ -0.68
RTTN-203ENST00000579021 ADGRD1Q6QNK2 874 aa10.8□□□□□ -0.68
RTTN-203ENST00000579021 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
RTTN-203ENST00000579021 SLC34A2O95436 690 aa10.76□□□□□ -0.69
RTTN-203ENST00000579021 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
RTTN-203ENST00000579021 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
RTTN-203ENST00000579021 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
RTTN-203ENST00000579021 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
RTTN-203ENST00000579021 PSDA5PKW4 1024 aaPredicted RBP10.69□□□□□ -0.7
RTTN-203ENST00000579021 TK2O00142 265 aa10.69□□□□□ -0.7
RTTN-203ENST00000579021 HRO43593 1189 aa10.69□□□□□ -0.7
RTTN-203ENST00000579021 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
RTTN-203ENST00000579021 TMC2Q8TDI7 906 aa10.69□□□□□ -0.7
RTTN-203ENST00000579021 KCTD12Q96CX2 325 aaKnown RBP10.68□□□□□ -0.7
RTTN-203ENST00000579021 PSEN2P49810 448 aa10.67□□□□□ -0.7
RTTN-203ENST00000579021 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
RTTN-203ENST00000579021 KDM4FA0A1W2PPD8 638 aa10.62□□□□□ -0.71
RTTN-203ENST00000579021 STK25O00506 426 aa10.62□□□□□ -0.71
RTTN-203ENST00000579021 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
RTTN-203ENST00000579021 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
RTTN-203ENST00000579021 PTCD2Q8WV60 388 aaKnown RBP10.57□□□□□ -0.72
RTTN-203ENST00000579021 PTPN5P54829 565 aa10.56□□□□□ -0.72
RTTN-203ENST00000579021 RGS20O76081 388 aa10.55□□□□□ -0.72
RTTN-203ENST00000579021 IRX2Q9BZI1 471 aaPredicted RBP10.55□□□□□ -0.72
RTTN-203ENST00000579021 KCNK17Q96T54 332 aa10.54□□□□□ -0.72
RTTN-203ENST00000579021 PPP1R37O75864 691 aa10.52□□□□□ -0.73
RTTN-203ENST00000579021 KCNH8Q96L42 1107 aa10.51□□□□□ -0.73
RTTN-203ENST00000579021 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
RTTN-203ENST00000579021 PLPP6Q8IY26 295 aa10.5□□□□□ -0.73
RTTN-203ENST00000579021 VPS9D1Q9Y2B5 631 aa10.5□□□□□ -0.73
RTTN-203ENST00000579021 A0A0G2JS52 829 aa10.48□□□□□ -0.73
RTTN-203ENST00000579021 FOXK1P85037 733 aa10.48□□□□□ -0.73
RTTN-203ENST00000579021 TBC1D12O60347 775 aa10.45□□□□□ -0.74
RTTN-203ENST00000579021 THSD4Q6ZMP0 1018 aa10.45□□□□□ -0.74
RTTN-203ENST00000579021 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
RTTN-203ENST00000579021 DSG2Q14126 1118 aa10.42□□□□□ -0.74
RTTN-203ENST00000579021 SLC4A5Q9BY07 1137 aa10.41□□□□□ -0.74
RTTN-203ENST00000579021 GPHNQ9NQX3 736 aaPredicted RBP10.41□□□□□ -0.74
RTTN-203ENST00000579021 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
RTTN-203ENST00000579021 ZNF454Q8N9F8 522 aa10.39□□□□□ -0.75
RTTN-203ENST00000579021 WNT2BQ93097 391 aa10.39□□□□□ -0.75
RTTN-203ENST00000579021 GOLGA8CPA6NN73 597 aa10.38□□□□□ -0.75
RTTN-203ENST00000579021 RGL2O15211 777 aa10.38□□□□□ -0.75
RTTN-203ENST00000579021 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
RTTN-203ENST00000579021 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
RTTN-203ENST00000579021 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
RTTN-203ENST00000579021 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
RTTN-203ENST00000579021 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
RTTN-203ENST00000579021 PTPREP23469 700 aa10.33□□□□□ -0.76
RTTN-203ENST00000579021 Q6ZNB5 142 aa10.32□□□□□ -0.76
RTTN-203ENST00000579021 FOSBP53539 338 aa10.3□□□□□ -0.76
RTTN-203ENST00000579021 PKD2Q13563 968 aa10.28□□□□□ -0.76
RTTN-203ENST00000579021 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
RTTN-203ENST00000579021 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
RTTN-203ENST00000579021 JPH4Q96JJ6 628 aa10.24□□□□□ -0.77
RTTN-203ENST00000579021 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
RTTN-203ENST00000579021 ZDHHC16Q969W1 377 aa10.21□□□□□ -0.77
RTTN-203ENST00000579021 PPP1R15BQ5SWA1 713 aa10.2□□□□□ -0.78
RTTN-203ENST00000579021 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
RTTN-203ENST00000579021 CRISPLD2Q9H0B8 497 aa10.19□□□□□ -0.78
RTTN-203ENST00000579021 ANO8Q9HCE9 1232 aaPredicted RBP10.19□□□□□ -0.78
RTTN-203ENST00000579021 BCAMP50895 628 aa10.18□□□□□ -0.78
RTTN-203ENST00000579021 EVI5O60447 810 aa10.17□□□□□ -0.78
RTTN-203ENST00000579021 PROX2Q3B8N5 592 aa10.16□□□□□ -0.78
RTTN-203ENST00000579021 HS6ST3Q8IZP7 471 aa10.16□□□□□ -0.78
RTTN-203ENST00000579021 RABGEF1Q9UJ41 708 aa10.16□□□□□ -0.78
RTTN-203ENST00000579021 PPP1R3GB7ZBB8 358 aa10.15□□□□□ -0.78
RTTN-203ENST00000579021 SOWAHBA6NEL2 793 aa10.13□□□□□ -0.79
RTTN-203ENST00000579021 LCE2BO14633 110 aa10.13□□□□□ -0.79
RTTN-203ENST00000579021 KCNC4Q03721 635 aa10.13□□□□□ -0.79
RTTN-203ENST00000579021 LAPTM4AQ15012 233 aa10.11□□□□□ -0.79
RTTN-203ENST00000579021 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
RTTN-203ENST00000579021 COL9A1P20849 921 aa10.1□□□□□ -0.79
RTTN-203ENST00000579021 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
RTTN-203ENST00000579021 LAPTM4BQ86VI4 370 aa10.09□□□□□ -0.79
RTTN-203ENST00000579021 NCKAP5LQ9HCH0 1330 aa10.08□□□□□ -0.8
RTTN-203ENST00000579021 TRAF7Q6Q0C0 670 aa10.08□□□□□ -0.8
RTTN-203ENST00000579021 ZFRQ96KR1 1074 aaKnown RBP10.08□□□□□ -0.8
RTTN-203ENST00000579021 PCDHGA10Q9Y5H3 936 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms