RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 EFCAB2Q5VUJ9 269 aa14.97□□□□□ -0.01
CDK5RAP3-211ENST00000578996 YEATS2Q9ULM3 1422 aa14.97□□□□□ -0.01
CDK5RAP3-211ENST00000578996 ARHGAP5Q13017 1502 aa14.97□□□□□ -0.01
CDK5RAP3-211ENST00000578996 MADDQ8WXG6 1647 aa14.96□□□□□ -0.01
CDK5RAP3-211ENST00000578996 POGZQ7Z3K3 1410 aa14.96□□□□□ -0.01
CDK5RAP3-211ENST00000578996 ZMYM4Q5VZL5 1548 aa14.96□□□□□ -0.02
CDK5RAP3-211ENST00000578996 CASKIN1Q8WXD9 1431 aa14.95□□□□□ -0.02
CDK5RAP3-211ENST00000578996 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
CDK5RAP3-211ENST00000578996 PLPPR3Q6T4P5 718 aa14.94□□□□□ -0.02
CDK5RAP3-211ENST00000578996 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
CDK5RAP3-211ENST00000578996 MLECQ14165 292 aa14.93□□□□□ -0.02
CDK5RAP3-211ENST00000578996 MAGI2Q86UL8 1455 aa14.93□□□□□ -0.02
CDK5RAP3-211ENST00000578996 RIMS1Q86UR5 1692 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-211ENST00000578996 FYCO1Q9BQS8 1478 aa14.91□□□□□ -0.02
CDK5RAP3-211ENST00000578996 SIGLEC1Q9BZZ2 1709 aa14.89□□□□□ -0.03
CDK5RAP3-211ENST00000578996 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
CDK5RAP3-211ENST00000578996 AFAP1Q8N556 730 aa14.88□□□□□ -0.03
CDK5RAP3-211ENST00000578996 C9orf84Q5VXU9 1444 aa14.87□□□□□ -0.03
CDK5RAP3-211ENST00000578996 PREX2Q70Z35 1606 aa14.87□□□□□ -0.03
CDK5RAP3-211ENST00000578996 ATP10AO60312 1499 aa14.87□□□□□ -0.03
CDK5RAP3-211ENST00000578996 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
CDK5RAP3-211ENST00000578996 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-211ENST00000578996 ZNF777Q9ULD5 760 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-211ENST00000578996 ABCC1P33527 1531 aa14.83□□□□□ -0.04
CDK5RAP3-211ENST00000578996 KDM5CP41229 1560 aa14.83□□□□□ -0.04
CDK5RAP3-211ENST00000578996 FER1L4A9Z1Z3 1794 aa14.83□□□□□ -0.04
CDK5RAP3-211ENST00000578996 TRAPPC8Q9Y2L5 1435 aa14.82□□□□□ -0.04
CDK5RAP3-211ENST00000578996 LMTK3Q96Q04 1460 aa14.82□□□□□ -0.04
CDK5RAP3-211ENST00000578996 CDC42BPAQ5VT25 1732 aa14.81□□□□□ -0.04
CDK5RAP3-211ENST00000578996 ARHGEF12Q9NZN5 1544 aa14.81□□□□□ -0.04
CDK5RAP3-211ENST00000578996 ITSN2Q9NZM3 1697 aa14.81□□□□□ -0.04
CDK5RAP3-211ENST00000578996 MTUS2Q5JR59 1369 aa14.8□□□□□ -0.04
CDK5RAP3-211ENST00000578996 DIP2CQ9Y2E4 1556 aa14.8□□□□□ -0.04
CDK5RAP3-211ENST00000578996 CEP162Q5TB80 1403 aa14.79□□□□□ -0.04
CDK5RAP3-211ENST00000578996 ABCA6Q8N139 1617 aa14.79□□□□□ -0.04
CDK5RAP3-211ENST00000578996 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
CDK5RAP3-211ENST00000578996 HSPA2P54652 639 aa14.78□□□□□ -0.04
CDK5RAP3-211ENST00000578996 GPATCH8Q9UKJ3 1502 aaKnown RBP14.77□□□□□ -0.04
CDK5RAP3-211ENST00000578996 CCNB3Q8WWL7 1395 aa14.77□□□□□ -0.04
CDK5RAP3-211ENST00000578996 SAMD9LQ8IVG5 1584 aa14.77□□□□□ -0.05
CDK5RAP3-211ENST00000578996 SYCP2Q9BX26 1530 aa14.76□□□□□ -0.05
CDK5RAP3-211ENST00000578996 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-211ENST00000578996 CFDP1Q9UEE9 299 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-211ENST00000578996 HNRNPMP52272 730 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDK5RAP3-211ENST00000578996 ESF1Q9H501 851 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-211ENST00000578996 REREQ9P2R6 1566 aa14.73□□□□□ -0.05
CDK5RAP3-211ENST00000578996 KIDINS220Q9ULH0 1771 aa14.73□□□□□ -0.05
CDK5RAP3-211ENST00000578996 EHBP1L1Q8N3D4 1523 aa14.72□□□□□ -0.05
CDK5RAP3-211ENST00000578996 SPAG9O60271 1321 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-211ENST00000578996 PLEKHH2Q8IVE3 1493 aa14.7□□□□□ -0.06
CDK5RAP3-211ENST00000578996 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
CDK5RAP3-211ENST00000578996 AGLP35573 1532 aa14.7□□□□□ -0.06
CDK5RAP3-211ENST00000578996 TIAM1Q13009 1591 aa14.69□□□□□ -0.06
CDK5RAP3-211ENST00000578996 PREX1Q8TCU6 1659 aa14.68□□□□□ -0.06
CDK5RAP3-211ENST00000578996 KIAA1107Q9UPP5 1409 aa14.68□□□□□ -0.06
CDK5RAP3-211ENST00000578996 ATP7AQ04656 1500 aa14.68□□□□□ -0.06
CDK5RAP3-211ENST00000578996 ZNF644Q9H582 1327 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-211ENST00000578996 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
CDK5RAP3-211ENST00000578996 SUPT6HQ7KZ85 1726 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-211ENST00000578996 C3P01024 1663 aa14.65□□□□□ -0.06
CDK5RAP3-211ENST00000578996 INO80Q9ULG1 1556 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-211ENST00000578996 FBXO41Q8TF61 875 aa14.64□□□□□ -0.07
CDK5RAP3-211ENST00000578996 A2MP01023 1474 aa14.63□□□□□ -0.07
CDK5RAP3-211ENST00000578996 NCOA2Q15596 1464 aa14.63□□□□□ -0.07
CDK5RAP3-211ENST00000578996 CNTLNQ9NXG0 1405 aa14.63□□□□□ -0.07
CDK5RAP3-211ENST00000578996 GGT6Q6P531 493 aa14.62□□□□□ -0.07
CDK5RAP3-211ENST00000578996 VPS8Q8N3P4 1428 aa14.62□□□□□ -0.07
CDK5RAP3-211ENST00000578996 PLXNC1O60486 1568 aa14.6□□□□□ -0.07
CDK5RAP3-211ENST00000578996 CAMSAP2Q08AD1 1489 aa14.6□□□□□ -0.07
CDK5RAP3-211ENST00000578996 MBD5Q9P267 1494 aa14.6□□□□□ -0.07
CDK5RAP3-211ENST00000578996 CLTCQ00610 1675 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-211ENST00000578996 ADGBQ8N7X0 1667 aa14.58□□□□□ -0.08
CDK5RAP3-211ENST00000578996 ZMYM3Q14202 1370 aa14.58□□□□□ -0.08
CDK5RAP3-211ENST00000578996 CCDC141Q6ZP82 1450 aa14.57□□□□□ -0.08
CDK5RAP3-211ENST00000578996 MROH2AA6NES4 1674 aa14.57□□□□□ -0.08
CDK5RAP3-211ENST00000578996 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
CDK5RAP3-211ENST00000578996 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
CDK5RAP3-211ENST00000578996 RTEL1-TNFRSF6BF6WH68 1400 aa14.56□□□□□ -0.08
CDK5RAP3-211ENST00000578996 CERKQ8TCT0 537 aa14.55□□□□□ -0.08
CDK5RAP3-211ENST00000578996 KANK4Q5T7N3 995 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-211ENST00000578996 NPATQ14207 1427 aa14.54□□□□□ -0.08
CDK5RAP3-211ENST00000578996 STRCQ7RTU9 1775 aa14.54□□□□□ -0.08
CDK5RAP3-211ENST00000578996 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-211ENST00000578996 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-211ENST00000578996 KIF3BO15066 747 aa14.52□□□□□ -0.09
CDK5RAP3-211ENST00000578996 TSPY4P0CV99 314 aa14.52□□□□□ -0.09
CDK5RAP3-211ENST00000578996 TSPY10P0CW01 314 aa14.52□□□□□ -0.09
CDK5RAP3-211ENST00000578996 RSPH4AQ5TD94 716 aa14.52□□□□□ -0.09
CDK5RAP3-211ENST00000578996 APLP2Q06481 763 aa14.5□□□□□ -0.09
CDK5RAP3-211ENST00000578996 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
CDK5RAP3-211ENST00000578996 CAMSAP1Q5T5Y3 1602 aa14.5□□□□□ -0.09
CDK5RAP3-211ENST00000578996 ARHGEF5Q12774 1597 aa14.5□□□□□ -0.09
CDK5RAP3-211ENST00000578996 PTPRKQ15262 1439 aa14.49□□□□□ -0.09
CDK5RAP3-211ENST00000578996 MYO3AQ8NEV4 1616 aa14.49□□□□□ -0.09
CDK5RAP3-211ENST00000578996 MAP3K1Q13233 1512 aa14.49□□□□□ -0.09
CDK5RAP3-211ENST00000578996 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
CDK5RAP3-211ENST00000578996 PTPRTO14522 1441 aa14.48□□□□□ -0.09
CDK5RAP3-211ENST00000578996 MYOM3Q5VTT5 1437 aa14.47□□□□□ -0.09
CDK5RAP3-211ENST00000578996 CEP170BQ9Y4F5 1589 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-211ENST00000578996 KDM5DQ9BY66 1539 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms