RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 ZFYVE16Q7Z3T8 1539 aa28.31■■■□□ 2.12
SLC9A3R1-203ENST00000578958 LRRIQ1Q96JM4 1722 aa28.3■■■□□ 2.12
SLC9A3R1-203ENST00000578958 ZMYM4Q5VZL5 1548 aa28.3■■■□□ 2.12
SLC9A3R1-203ENST00000578958 POGZQ7Z3K3 1410 aa28.3■■■□□ 2.12
SLC9A3R1-203ENST00000578958 ADAMTSL3P82987 1691 aa28.29■■■□□ 2.12
SLC9A3R1-203ENST00000578958 MYT1LQ9UL68 1186 aa28.29■■■□□ 2.12
SLC9A3R1-203ENST00000578958 BCORL1Q5H9F3 1711 aa28.29■■■□□ 2.12
SLC9A3R1-203ENST00000578958 PTPRMP28827 1452 aa28.28■■■□□ 2.12
SLC9A3R1-203ENST00000578958 FYCO1Q9BQS8 1478 aa28.27■■■□□ 2.12
SLC9A3R1-203ENST00000578958 YEATS2Q9ULM3 1422 aa28.26■■■□□ 2.12
SLC9A3R1-203ENST00000578958 MADDQ8WXG6 1647 aa28.22■■■□□ 2.11
SLC9A3R1-203ENST00000578958 MLECQ14165 292 aa28.22■■■□□ 2.11
SLC9A3R1-203ENST00000578958 ZNF518AQ6AHZ1 1483 aa28.21■■■□□ 2.11
SLC9A3R1-203ENST00000578958 AFAP1Q8N556 730 aa28.19■■■□□ 2.1
SLC9A3R1-203ENST00000578958 PLPPR3Q6T4P5 718 aa28.18■■■□□ 2.1
SLC9A3R1-203ENST00000578958 ATP10AO60312 1499 aa28.17■■■□□ 2.1
SLC9A3R1-203ENST00000578958 RIMS1Q86UR5 1692 aaKnown RBP28.14■■■□□ 2.1
SLC9A3R1-203ENST00000578958 C9orf84Q5VXU9 1444 aa28.14■■■□□ 2.1
SLC9A3R1-203ENST00000578958 CDC42BPBQ9Y5S2 1711 aa28.13■■■□□ 2.09
SLC9A3R1-203ENST00000578958 PREX2Q70Z35 1606 aa28.12■■■□□ 2.09
SLC9A3R1-203ENST00000578958 ZNF777Q9ULD5 760 aaPredicted RBP28.12■■■□□ 2.09
SLC9A3R1-203ENST00000578958 MTUS2Q5JR59 1369 aa28.08■■■□□ 2.09
SLC9A3R1-203ENST00000578958 KDM5CP41229 1560 aa28.07■■■□□ 2.08
SLC9A3R1-203ENST00000578958 CEP162Q5TB80 1403 aa28.06■■■□□ 2.08
SLC9A3R1-203ENST00000578958 SIGLEC1Q9BZZ2 1709 aa28.06■■■□□ 2.08
SLC9A3R1-203ENST00000578958 ABCC1P33527 1531 aa28.05■■■□□ 2.08
SLC9A3R1-203ENST00000578958 CDC42BPAQ5VT25 1732 aa28.04■■■□□ 2.08
SLC9A3R1-203ENST00000578958 TRAPPC8Q9Y2L5 1435 aa28.03■■■□□ 2.08
SLC9A3R1-203ENST00000578958 CCNB3Q8WWL7 1395 aa28.02■■■□□ 2.08
SLC9A3R1-203ENST00000578958 CFDP1Q9UEE9 299 aaPredicted RBP28.02■■■□□ 2.08
SLC9A3R1-203ENST00000578958 MLH3Q9UHC1 1453 aa28.02■■■□□ 2.08
SLC9A3R1-203ENST00000578958 FER1L4A9Z1Z3 1794 aa28.01■■■□□ 2.08
SLC9A3R1-203ENST00000578958 ARHGEF12Q9NZN5 1544 aa28■■■□□ 2.07
SLC9A3R1-203ENST00000578958 GPATCH8Q9UKJ3 1502 aaKnown RBP28■■■□□ 2.07
SLC9A3R1-203ENST00000578958 ITSN2Q9NZM3 1697 aa28■■■□□ 2.07
SLC9A3R1-203ENST00000578958 ESF1Q9H501 851 aaKnown RBP27.97■■■□□ 2.07
SLC9A3R1-203ENST00000578958 DIP2CQ9Y2E4 1556 aa27.97■■■□□ 2.07
SLC9A3R1-203ENST00000578958 HNRNPMP52272 730 aaKnown RBP eCLIP27.96■■■□□ 2.07
SLC9A3R1-203ENST00000578958 LMTK3Q96Q04 1460 aa27.95■■■□□ 2.07
SLC9A3R1-203ENST00000578958 ILDR1Q86SU0 546 aaPredicted RBP27.95■■■□□ 2.06
SLC9A3R1-203ENST00000578958 SPAG9O60271 1321 aaKnown RBP27.93■■■□□ 2.06
SLC9A3R1-203ENST00000578958 SAMD9LQ8IVG5 1584 aa27.93■■■□□ 2.06
SLC9A3R1-203ENST00000578958 ABCA6Q8N139 1617 aa27.92■■■□□ 2.06
SLC9A3R1-203ENST00000578958 PLEKHH2Q8IVE3 1493 aa27.92■■■□□ 2.06
SLC9A3R1-203ENST00000578958 LOC105371045A0A1W2PR82 267 aa27.92■■■□□ 2.06
SLC9A3R1-203ENST00000578958 SYCP2Q9BX26 1530 aa27.92■■■□□ 2.06
SLC9A3R1-203ENST00000578958 REREQ9P2R6 1566 aa27.9■■■□□ 2.06
SLC9A3R1-203ENST00000578958 HSPA2P54652 639 aa27.9■■■□□ 2.06
SLC9A3R1-203ENST00000578958 EHBP1L1Q8N3D4 1523 aa27.9■■■□□ 2.06
SLC9A3R1-203ENST00000578958 CEBPAP49715 358 aaPredicted RBP27.89■■■□□ 2.06
SLC9A3R1-203ENST00000578958 KIAA1107Q9UPP5 1409 aa27.88■■■□□ 2.05
SLC9A3R1-203ENST00000578958 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
SLC9A3R1-203ENST00000578958 AGLP35573 1532 aa27.84■■■□□ 2.05
SLC9A3R1-203ENST00000578958 TIAM1Q13009 1591 aa27.8■■■□□ 2.04
SLC9A3R1-203ENST00000578958 ZNF644Q9H582 1327 aaPredicted RBP27.79■■■□□ 2.04
SLC9A3R1-203ENST00000578958 ATP7AQ04656 1500 aa27.78■■■□□ 2.04
SLC9A3R1-203ENST00000578958 VPS8Q8N3P4 1428 aa27.76■■■□□ 2.04
SLC9A3R1-203ENST00000578958 SUPT6HQ7KZ85 1726 aaKnown RBP27.75■■■□□ 2.03
SLC9A3R1-203ENST00000578958 CNTLNQ9NXG0 1405 aa27.75■■■□□ 2.03
SLC9A3R1-203ENST00000578958 PREX1Q8TCU6 1659 aa27.75■■■□□ 2.03
SLC9A3R1-203ENST00000578958 UHRF1BP1Q6BDS2 1440 aa27.74■■■□□ 2.03
SLC9A3R1-203ENST00000578958 NCOA2Q15596 1464 aa27.73■■■□□ 2.03
SLC9A3R1-203ENST00000578958 A2MP01023 1474 aa27.72■■■□□ 2.03
SLC9A3R1-203ENST00000578958 INO80Q9ULG1 1556 aaPredicted RBP27.71■■■□□ 2.03
SLC9A3R1-203ENST00000578958 GGT6Q6P531 493 aa27.69■■■□□ 2.02
SLC9A3R1-203ENST00000578958 C3P01024 1663 aa27.68■■■□□ 2.02
SLC9A3R1-203ENST00000578958 SETD1BQ9UPS6 1966 aaKnown RBP27.68■■■□□ 2.02
SLC9A3R1-203ENST00000578958 RSPH4AQ5TD94 716 aa27.67■■■□□ 2.02
SLC9A3R1-203ENST00000578958 MBD5Q9P267 1494 aa27.67■■■□□ 2.02
SLC9A3R1-203ENST00000578958 FBXO41Q8TF61 875 aa27.66■■■□□ 2.02
SLC9A3R1-203ENST00000578958 LRRC9Q6ZRR7 1453 aa27.64■■■□□ 2.02
SLC9A3R1-203ENST00000578958 DMRT2Q9Y5R5 561 aa27.64■■■□□ 2.02
SLC9A3R1-203ENST00000578958 RTEL1-TNFRSF6BF6WH68 1400 aa27.64■■■□□ 2.02
SLC9A3R1-203ENST00000578958 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.01
SLC9A3R1-203ENST00000578958 APLP2Q06481 763 aa27.63■■■□□ 2.01
SLC9A3R1-203ENST00000578958 ZMYM3Q14202 1370 aa27.62■■■□□ 2.01
SLC9A3R1-203ENST00000578958 PLXNC1O60486 1568 aa27.62■■■□□ 2.01
SLC9A3R1-203ENST00000578958 CCDC141Q6ZP82 1450 aa27.62■■■□□ 2.01
SLC9A3R1-203ENST00000578958 ADGBQ8N7X0 1667 aa27.62■■■□□ 2.01
SLC9A3R1-203ENST00000578958 TSPY4P0CV99 314 aa27.61■■■□□ 2.01
SLC9A3R1-203ENST00000578958 TSPY10P0CW01 314 aa27.61■■■□□ 2.01
SLC9A3R1-203ENST00000578958 PPP6R1Q9UPN7 881 aa27.58■■■□□ 2.01
SLC9A3R1-203ENST00000578958 MROH2AA6NES4 1674 aa27.57■■■□□ 2
SLC9A3R1-203ENST00000578958 KANK4Q5T7N3 995 aaPredicted RBP27.57■■■□□ 2
SLC9A3R1-203ENST00000578958 DHX29Q7Z478 1369 aaKnown RBP27.57■■■□□ 2
SLC9A3R1-203ENST00000578958 MAP3K1Q13233 1512 aa27.56■■■□□ 2
SLC9A3R1-203ENST00000578958 NPATQ14207 1427 aa27.55■■■□□ 2
SLC9A3R1-203ENST00000578958 CLTCQ00610 1675 aaKnown RBP27.55■■■□□ 2
SLC9A3R1-203ENST00000578958 KIF3BO15066 747 aa27.54■■■□□ 2
SLC9A3R1-203ENST00000578958 CERKQ8TCT0 537 aa27.5■■□□□ 1.99
SLC9A3R1-203ENST00000578958 ARHGEF5Q12774 1597 aa27.49■■□□□ 1.99
SLC9A3R1-203ENST00000578958 STRCQ7RTU9 1775 aa27.46■■□□□ 1.99
SLC9A3R1-203ENST00000578958 MYOM3Q5VTT5 1437 aa27.46■■□□□ 1.99
SLC9A3R1-203ENST00000578958 MIA2Q96PC5 1412 aa27.45■■□□□ 1.98
SLC9A3R1-203ENST00000578958 WASHC2CQ9Y4E1 1318 aa27.43■■□□□ 1.98
SLC9A3R1-203ENST00000578958 PTPRKQ15262 1439 aa27.43■■□□□ 1.98
SLC9A3R1-203ENST00000578958 PTPRTO14522 1441 aa27.41■■□□□ 1.98
SLC9A3R1-203ENST00000578958 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
SLC9A3R1-203ENST00000578958 CAMSAP1Q5T5Y3 1602 aa27.38■■□□□ 1.97
SLC9A3R1-203ENST00000578958 KDM5DQ9BY66 1539 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms