RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
TRAPPC8-206ENST00000578886 ARSIQ5FYB1 569 aa12.39□□□□□ -0.43
TRAPPC8-206ENST00000578886 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC8-206ENST00000578886 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRAPPC8-206ENST00000578886 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
TRAPPC8-206ENST00000578886 RIOK3O14730 519 aaKnown RBP12.34□□□□□ -0.43
TRAPPC8-206ENST00000578886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC8-206ENST00000578886 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC8-206ENST00000578886 KHSRPQ92945 711 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC8-206ENST00000578886 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC8-206ENST00000578886 PBX2P40425 430 aa12.29□□□□□ -0.44
TRAPPC8-206ENST00000578886 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC8-206ENST00000578886 NLRP6P59044 892 aa12.24□□□□□ -0.45
TRAPPC8-206ENST00000578886 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
TRAPPC8-206ENST00000578886 NUDT7P0C024 238 aa12.21□□□□□ -0.45
TRAPPC8-206ENST00000578886 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
TRAPPC8-206ENST00000578886 KIF3CO14782 793 aa12.19□□□□□ -0.46
TRAPPC8-206ENST00000578886 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
TRAPPC8-206ENST00000578886 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
TRAPPC8-206ENST00000578886 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
TRAPPC8-206ENST00000578886 LHX6Q9UPM6 363 aa12.16□□□□□ -0.46
TRAPPC8-206ENST00000578886 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
TRAPPC8-206ENST00000578886 SLC34A2O95436 690 aa12.13□□□□□ -0.47
TRAPPC8-206ENST00000578886 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC8-206ENST00000578886 PCDHGA4Q9Y5G9 962 aa12.13□□□□□ -0.47
TRAPPC8-206ENST00000578886 TAOK2Q9UL54 1235 aa12.12□□□□□ -0.47
TRAPPC8-206ENST00000578886 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
TRAPPC8-206ENST00000578886 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
TRAPPC8-206ENST00000578886 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
TRAPPC8-206ENST00000578886 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-206ENST00000578886 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
TRAPPC8-206ENST00000578886 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
TRAPPC8-206ENST00000578886 TK2O00142 265 aa12.02□□□□□ -0.49
TRAPPC8-206ENST00000578886 STK25O00506 426 aa11.99□□□□□ -0.49
TRAPPC8-206ENST00000578886 HRO43593 1189 aa11.99□□□□□ -0.49
TRAPPC8-206ENST00000578886 DMRTA1Q5VZB9 504 aa11.95□□□□□ -0.5
TRAPPC8-206ENST00000578886 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
TRAPPC8-206ENST00000578886 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
TRAPPC8-206ENST00000578886 PSEN2P49810 448 aa11.93□□□□□ -0.5
TRAPPC8-206ENST00000578886 PTCD2Q8WV60 388 aaKnown RBP11.92□□□□□ -0.5
TRAPPC8-206ENST00000578886 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.5
TRAPPC8-206ENST00000578886 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
TRAPPC8-206ENST00000578886 KCNH8Q96L42 1107 aa11.86□□□□□ -0.51
TRAPPC8-206ENST00000578886 RGS20O76081 388 aa11.85□□□□□ -0.51
TRAPPC8-206ENST00000578886 PPP1R37O75864 691 aa11.82□□□□□ -0.52
TRAPPC8-206ENST00000578886 FOXK1P85037 733 aa11.82□□□□□ -0.52
TRAPPC8-206ENST00000578886 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
TRAPPC8-206ENST00000578886 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
TRAPPC8-206ENST00000578886 TBC1D12O60347 775 aa11.8□□□□□ -0.52
TRAPPC8-206ENST00000578886 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC8-206ENST00000578886 PTPN5P54829 565 aa11.79□□□□□ -0.52
TRAPPC8-206ENST00000578886 PLPP6Q8IY26 295 aa11.79□□□□□ -0.52
TRAPPC8-206ENST00000578886 IRX2Q9BZI1 471 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-206ENST00000578886 VPS9D1Q9Y2B5 631 aa11.78□□□□□ -0.52
TRAPPC8-206ENST00000578886 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC8-206ENST00000578886 A0A0G2JS52 829 aa11.72□□□□□ -0.53
TRAPPC8-206ENST00000578886 THSD4Q6ZMP0 1018 aa11.72□□□□□ -0.53
TRAPPC8-206ENST00000578886 SLC4A5Q9BY07 1137 aa11.72□□□□□ -0.53
TRAPPC8-206ENST00000578886 RGL2O15211 777 aa11.71□□□□□ -0.53
TRAPPC8-206ENST00000578886 DSG2Q14126 1118 aa11.71□□□□□ -0.53
TRAPPC8-206ENST00000578886 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
TRAPPC8-206ENST00000578886 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
TRAPPC8-206ENST00000578886 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-206ENST00000578886 GOLGA8CPA6NN73 597 aa11.65□□□□□ -0.54
TRAPPC8-206ENST00000578886 WNT2BQ93097 391 aa11.65□□□□□ -0.54
TRAPPC8-206ENST00000578886 OXER1Q8TDS5 423 aa11.64□□□□□ -0.55
TRAPPC8-206ENST00000578886 PTPREP23469 700 aa11.63□□□□□ -0.55
TRAPPC8-206ENST00000578886 PKD2Q13563 968 aa11.63□□□□□ -0.55
TRAPPC8-206ENST00000578886 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
TRAPPC8-206ENST00000578886 ZBED2Q9BTP6 218 aa11.61□□□□□ -0.55
TRAPPC8-206ENST00000578886 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAPPC8-206ENST00000578886 FOSBP53539 338 aa11.59□□□□□ -0.55
TRAPPC8-206ENST00000578886 NBPF3Q9H094 633 aa11.59□□□□□ -0.55
TRAPPC8-206ENST00000578886 JPH4Q96JJ6 628 aa11.54□□□□□ -0.56
TRAPPC8-206ENST00000578886 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC8-206ENST00000578886 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
TRAPPC8-206ENST00000578886 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
TRAPPC8-206ENST00000578886 Q6ZNB5 142 aa11.5□□□□□ -0.57
TRAPPC8-206ENST00000578886 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
TRAPPC8-206ENST00000578886 ADAM33Q9BZ11 813 aa11.49□□□□□ -0.57
TRAPPC8-206ENST00000578886 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
TRAPPC8-206ENST00000578886 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-206ENST00000578886 ANKK1Q8NFD2 765 aa11.47□□□□□ -0.57
TRAPPC8-206ENST00000578886 EVI5O60447 810 aa11.45□□□□□ -0.58
TRAPPC8-206ENST00000578886 RABGEF1Q9UJ41 708 aa11.44□□□□□ -0.58
TRAPPC8-206ENST00000578886 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
TRAPPC8-206ENST00000578886 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
TRAPPC8-206ENST00000578886 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
TRAPPC8-206ENST00000578886 BCAMP50895 628 aa11.39□□□□□ -0.59
TRAPPC8-206ENST00000578886 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
TRAPPC8-206ENST00000578886 PROX2Q3B8N5 592 aa11.38□□□□□ -0.59
TRAPPC8-206ENST00000578886 LAPTM4BQ86VI4 370 aa11.38□□□□□ -0.59
TRAPPC8-206ENST00000578886 NCKAP5LQ9HCH0 1330 aa11.37□□□□□ -0.59
TRAPPC8-206ENST00000578886 LAPTM4AQ15012 233 aa11.37□□□□□ -0.59
TRAPPC8-206ENST00000578886 PDE4AP27815 886 aa11.36□□□□□ -0.59
TRAPPC8-206ENST00000578886 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
TRAPPC8-206ENST00000578886 KCNC4Q03721 635 aa11.35□□□□□ -0.59
TRAPPC8-206ENST00000578886 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
TRAPPC8-206ENST00000578886 COL9A1P20849 921 aa11.33□□□□□ -0.6
TRAPPC8-206ENST00000578886 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms