RNA–Protein interactions for RNA: ENST00000578618.5

EPB41L3-214, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 1 (best)

Gene EPB41L3, Length 4,908 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-214ENST00000578618 NAP1L2Q9ULW6 460 aaPredicted RBP11.8□□□□□ -0.52
EPB41L3-214ENST00000578618 ESPNB1AK53 854 aa11.8□□□□□ -0.52
EPB41L3-214ENST00000578618 E9PSI1 815 aa11.79□□□□□ -0.52
EPB41L3-214ENST00000578618 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
EPB41L3-214ENST00000578618 DDX49Q9Y6V7 483 aaKnown RBP11.79□□□□□ -0.52
EPB41L3-214ENST00000578618 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
EPB41L3-214ENST00000578618 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
EPB41L3-214ENST00000578618 BAZ1BQ9UIG0 1483 aaKnown RBP11.78□□□□□ -0.52
EPB41L3-214ENST00000578618 TAF3Q5VWG9 929 aa11.78□□□□□ -0.52
EPB41L3-214ENST00000578618 CGNQ9P2M7 1197 aaKnown RBP11.77□□□□□ -0.52
EPB41L3-214ENST00000578618 CHMP4BQ9H444 224 aaKnown RBP11.77□□□□□ -0.53
EPB41L3-214ENST00000578618 UQCRHLA0A096LP55 91 aa11.77□□□□□ -0.53
EPB41L3-214ENST00000578618 UQCRHP07919 91 aa11.77□□□□□ -0.53
EPB41L3-214ENST00000578618 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
EPB41L3-214ENST00000578618 EXOC6Q8TAG9 804 aa11.77□□□□□ -0.53
EPB41L3-214ENST00000578618 MFAP1P55081 439 aaKnown RBP11.76□□□□□ -0.53
EPB41L3-214ENST00000578618 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
EPB41L3-214ENST00000578618 SYAP1Q96A49 352 aaPredicted RBP11.75□□□□□ -0.53
EPB41L3-214ENST00000578618 FGD1P98174 961 aa11.74□□□□□ -0.53
EPB41L3-214ENST00000578618 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
EPB41L3-214ENST00000578618 P3H3Q8IVL6 736 aa11.74□□□□□ -0.53
EPB41L3-214ENST00000578618 TEX35Q5T0J7 233 aa11.74□□□□□ -0.53
EPB41L3-214ENST00000578618 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
EPB41L3-214ENST00000578618 NASPP49321 788 aaPredicted RBP11.73□□□□□ -0.53
EPB41L3-214ENST00000578618 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
EPB41L3-214ENST00000578618 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
EPB41L3-214ENST00000578618 CBX1P83916 185 aa11.72□□□□□ -0.53
EPB41L3-214ENST00000578618 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
EPB41L3-214ENST00000578618 TRAK2O60296 914 aa11.71□□□□□ -0.53
EPB41L3-214ENST00000578618 GPS2Q13227 327 aa11.7□□□□□ -0.54
EPB41L3-214ENST00000578618 CHMP5Q9NZZ3 219 aa11.7□□□□□ -0.54
EPB41L3-214ENST00000578618 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
EPB41L3-214ENST00000578618 C11orf95C9JLR9 678 aaPredicted RBP11.7□□□□□ -0.54
EPB41L3-214ENST00000578618 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
EPB41L3-214ENST00000578618 POGKQ9P215 609 aa11.69□□□□□ -0.54
EPB41L3-214ENST00000578618 CLIP1P30622 1438 aa11.69□□□□□ -0.54
EPB41L3-214ENST00000578618 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
EPB41L3-214ENST00000578618 ZBED9Q6R2W3 1325 aa11.68□□□□□ -0.54
EPB41L3-214ENST00000578618 GRPEL1Q9HAV7 217 aa11.68□□□□□ -0.54
EPB41L3-214ENST00000578618 ERICH4A6NGS2 130 aa11.67□□□□□ -0.54
EPB41L3-214ENST00000578618 CCDC173Q0VFZ6 552 aa11.67□□□□□ -0.54
EPB41L3-214ENST00000578618 VGLL3A8MV65 326 aa11.67□□□□□ -0.54
EPB41L3-214ENST00000578618 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
EPB41L3-214ENST00000578618 DIAPH3Q9NSV4 1193 aa11.67□□□□□ -0.54
EPB41L3-214ENST00000578618 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
EPB41L3-214ENST00000578618 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
EPB41L3-214ENST00000578618 HSPA5P11021 654 aaKnown RBP11.66□□□□□ -0.54
EPB41L3-214ENST00000578618 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
EPB41L3-214ENST00000578618 PLIN1O60240 522 aa11.65□□□□□ -0.54
EPB41L3-214ENST00000578618 AAMPQ13685 434 aa11.65□□□□□ -0.54
EPB41L3-214ENST00000578618 CCDC39Q9UFE4 941 aa11.65□□□□□ -0.54
EPB41L3-214ENST00000578618 KCNJ4P48050 445 aa11.65□□□□□ -0.54
EPB41L3-214ENST00000578618 TRERF1Q96PN7 1200 aa11.65□□□□□ -0.54
EPB41L3-214ENST00000578618 CWC15Q9P013 229 aaKnown RBP11.65□□□□□ -0.54
EPB41L3-214ENST00000578618 PHF14O94880 888 aa11.64□□□□□ -0.55
EPB41L3-214ENST00000578618 CLCN1P35523 988 aa11.64□□□□□ -0.55
EPB41L3-214ENST00000578618 BACH2Q9BYV9 841 aa11.64□□□□□ -0.55
EPB41L3-214ENST00000578618 FOXD4L5Q5VV16 416 aaPredicted RBP11.64□□□□□ -0.55
EPB41L3-214ENST00000578618 FOXD4L4Q8WXT5 416 aaPredicted RBP11.64□□□□□ -0.55
EPB41L3-214ENST00000578618 ZSCAN30Q86W11 494 aa11.62□□□□□ -0.55
EPB41L3-214ENST00000578618 GPATCH11Q8N954 259 aa11.62□□□□□ -0.55
EPB41L3-214ENST00000578618 CRBNQ96SW2 442 aa11.62□□□□□ -0.55
EPB41L3-214ENST00000578618 CC2D1BQ5T0F9 858 aaKnown RBP11.61□□□□□ -0.55
EPB41L3-214ENST00000578618 U2SURPO15042 1029 aaKnown RBP11.61□□□□□ -0.55
EPB41L3-214ENST00000578618 ABCC9O60706 1549 aa11.61□□□□□ -0.55
EPB41L3-214ENST00000578618 TSPYL1Q9H0U9 437 aa11.61□□□□□ -0.55
EPB41L3-214ENST00000578618 PDCL2Q8N4E4 241 aa11.6□□□□□ -0.55
EPB41L3-214ENST00000578618 DEF6Q9H4E7 631 aa11.6□□□□□ -0.55
EPB41L3-214ENST00000578618 NOC3LQ8WTT2 800 aaKnown RBP11.6□□□□□ -0.55
EPB41L3-214ENST00000578618 RWDD1Q9H446 243 aaPredicted RBP11.6□□□□□ -0.55
EPB41L3-214ENST00000578618 GNL2Q13823 731 aaKnown RBP11.59□□□□□ -0.55
EPB41L3-214ENST00000578618 RNF214Q8ND24 703 aa11.59□□□□□ -0.55
EPB41L3-214ENST00000578618 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
EPB41L3-214ENST00000578618 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
EPB41L3-214ENST00000578618 CCAR2Q8N163 923 aaKnown RBP11.59□□□□□ -0.55
EPB41L3-214ENST00000578618 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
EPB41L3-214ENST00000578618 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
EPB41L3-214ENST00000578618 DNAJC2Q99543 621 aaKnown RBP11.58□□□□□ -0.56
EPB41L3-214ENST00000578618 TNNT1P13805 278 aa11.58□□□□□ -0.56
EPB41L3-214ENST00000578618 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 PMFBP1Q8TBY8 1022 aa11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 WASHC2AQ641Q2 1341 aa11.57□□□□□ -0.56
EPB41L3-214ENST00000578618 LETM1O95202 739 aaPredicted RBP11.56□□□□□ -0.56
EPB41L3-214ENST00000578618 CALCOCO1Q9P1Z2 691 aa11.56□□□□□ -0.56
EPB41L3-214ENST00000578618 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
EPB41L3-214ENST00000578618 HSP90AB3PQ58FF7 597 aa11.56□□□□□ -0.56
EPB41L3-214ENST00000578618 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
EPB41L3-214ENST00000578618 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
EPB41L3-214ENST00000578618 RDXP35241 583 aaKnown RBP11.55□□□□□ -0.56
EPB41L3-214ENST00000578618 SMAP1Q8IYB5 467 aaPredicted RBP11.55□□□□□ -0.56
EPB41L3-214ENST00000578618 KTN1Q86UP2 1357 aaKnown RBP11.55□□□□□ -0.56
EPB41L3-214ENST00000578618 XPCQ01831 940 aaPredicted RBP11.55□□□□□ -0.56
EPB41L3-214ENST00000578618 RRAGDQ9NQL2 400 aaPredicted RBP11.55□□□□□ -0.56
EPB41L3-214ENST00000578618 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
EPB41L3-214ENST00000578618 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms