RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.81
DDX42-207ENST00000578593 CENPJQ9HC77 1338 aaPredicted RBP10.02□□□□□ -0.81
DDX42-207ENST00000578593 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
DDX42-207ENST00000578593 PPP4R2Q9NY27 417 aa10□□□□□ -0.81
DDX42-207ENST00000578593 SETD5Q9C0A6 1442 aa9.98□□□□□ -0.81
DDX42-207ENST00000578593 CNPY4Q8N129 248 aa9.98□□□□□ -0.81
DDX42-207ENST00000578593 PPM1GO15355 546 aaPredicted RBP9.97□□□□□ -0.81
DDX42-207ENST00000578593 B4GALNT3Q6L9W6 998 aa9.97□□□□□ -0.81
DDX42-207ENST00000578593 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
DDX42-207ENST00000578593 ZNF830Q96NB3 372 aaPredicted RBP9.97□□□□□ -0.81
DDX42-207ENST00000578593 CUX1P39880 1505 aa9.97□□□□□ -0.81
DDX42-207ENST00000578593 IPO9Q96P70 1041 aaKnown RBP9.97□□□□□ -0.81
DDX42-207ENST00000578593 KCNA4P22459 653 aa9.96□□□□□ -0.81
DDX42-207ENST00000578593 GSE1Q14687 1217 aa9.96□□□□□ -0.81
DDX42-207ENST00000578593 ARHGAP35Q9NRY4 1499 aa9.96□□□□□ -0.81
DDX42-207ENST00000578593 TPRNQ4KMQ1 711 aa9.96□□□□□ -0.81
DDX42-207ENST00000578593 KCNG1Q9UIX4 513 aa9.96□□□□□ -0.81
DDX42-207ENST00000578593 HMGXB3Q12766 1538 aa9.96□□□□□ -0.82
DDX42-207ENST00000578593 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
DDX42-207ENST00000578593 THOC2Q8NI27 1593 aaKnown RBP9.95□□□□□ -0.82
DDX42-207ENST00000578593 PDCL3Q9H2J4 239 aa9.93□□□□□ -0.82
DDX42-207ENST00000578593 NCLP19338 710 aaKnown RBP9.92□□□□□ -0.82
DDX42-207ENST00000578593 TMEM51Q9NW97 253 aa9.92□□□□□ -0.82
DDX42-207ENST00000578593 ARID4BQ4LE39 1312 aaPredicted RBP9.92□□□□□ -0.82
DDX42-207ENST00000578593 RRAGDQ9NQL2 400 aaPredicted RBP9.91□□□□□ -0.82
DDX42-207ENST00000578593 KIF21AQ7Z4S6 1674 aa9.91□□□□□ -0.82
DDX42-207ENST00000578593 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
DDX42-207ENST00000578593 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
DDX42-207ENST00000578593 ANP32AP39687 249 aaKnown RBP9.89□□□□□ -0.83
DDX42-207ENST00000578593 FAM50AQ14320 339 aaKnown RBP9.89□□□□□ -0.83
DDX42-207ENST00000578593 WWC1Q8IX03 1113 aa9.88□□□□□ -0.83
DDX42-207ENST00000578593 PHLDB1Q86UU1 1377 aa9.87□□□□□ -0.83
DDX42-207ENST00000578593 TONSLQ96HA7 1378 aa9.87□□□□□ -0.83
DDX42-207ENST00000578593 CCDC184Q52MB2 194 aa9.87□□□□□ -0.83
DDX42-207ENST00000578593 RGS22Q8NE09 1264 aa9.87□□□□□ -0.83
DDX42-207ENST00000578593 DCAF11Q8TEB1 546 aa9.87□□□□□ -0.83
DDX42-207ENST00000578593 CFAP43Q8NDM7 1665 aa9.87□□□□□ -0.83
DDX42-207ENST00000578593 VGLL3A8MV65 326 aa9.86□□□□□ -0.83
DDX42-207ENST00000578593 POLR3GLQ9BT43 218 aa9.86□□□□□ -0.83
DDX42-207ENST00000578593 LAMC3Q9Y6N6 1575 aa9.86□□□□□ -0.83
DDX42-207ENST00000578593 FRAT1Q92837 279 aaPredicted RBP9.86□□□□□ -0.83
DDX42-207ENST00000578593 PRDM2Q13029 1718 aa9.86□□□□□ -0.83
DDX42-207ENST00000578593 MAP3K1Q13233 1512 aa9.85□□□□□ -0.83
DDX42-207ENST00000578593 KIF27Q86VH2 1401 aa9.85□□□□□ -0.83
DDX42-207ENST00000578593 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
DDX42-207ENST00000578593 LRRC9Q6ZRR7 1453 aa9.83□□□□□ -0.84
DDX42-207ENST00000578593 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
DDX42-207ENST00000578593 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
DDX42-207ENST00000578593 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
DDX42-207ENST00000578593 LAS1LQ9Y4W2 734 aaKnown RBP9.83□□□□□ -0.84
DDX42-207ENST00000578593 VGFO15240 615 aaPredicted RBP9.83□□□□□ -0.84
DDX42-207ENST00000578593 ZHX1Q9UKY1 873 aaPredicted RBP9.83□□□□□ -0.84
DDX42-207ENST00000578593 PCF11O94913 1555 aaKnown RBP9.82□□□□□ -0.84
DDX42-207ENST00000578593 ZBED9Q6R2W3 1325 aa9.82□□□□□ -0.84
DDX42-207ENST00000578593 FHAD1B1AJZ9 1412 aa9.82□□□□□ -0.84
DDX42-207ENST00000578593 SMAP1Q8IYB5 467 aaPredicted RBP9.82□□□□□ -0.84
DDX42-207ENST00000578593 CCDC9Q9Y3X0 531 aaKnown RBP9.81□□□□□ -0.84
DDX42-207ENST00000578593 IGSF3O75054 1194 aa9.8□□□□□ -0.84
DDX42-207ENST00000578593 CFTRP13569 1480 aa9.8□□□□□ -0.84
DDX42-207ENST00000578593 TMED8Q6PL24 325 aaPredicted RBP9.8□□□□□ -0.84
DDX42-207ENST00000578593 TICAM2Q86XR7 235 aa9.79□□□□□ -0.84
DDX42-207ENST00000578593 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.79□□□□□ -0.84
DDX42-207ENST00000578593 CLCN1P35523 988 aa9.79□□□□□ -0.84
DDX42-207ENST00000578593 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
DDX42-207ENST00000578593 ARID3AQ99856 593 aa9.79□□□□□ -0.84
DDX42-207ENST00000578593 MRS2Q9HD23 443 aa9.79□□□□□ -0.84
DDX42-207ENST00000578593 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
DDX42-207ENST00000578593 KDM5BQ9UGL1 1544 aa9.78□□□□□ -0.84
DDX42-207ENST00000578593 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
DDX42-207ENST00000578593 HSPA5P11021 654 aaKnown RBP9.78□□□□□ -0.84
DDX42-207ENST00000578593 PPP6R1Q9UPN7 881 aa9.78□□□□□ -0.84
DDX42-207ENST00000578593 MRC2Q9UBG0 1479 aa9.77□□□□□ -0.84
DDX42-207ENST00000578593 CNTLNQ9NXG0 1405 aa9.77□□□□□ -0.84
DDX42-207ENST00000578593 IGF1RP08069 1367 aa9.77□□□□□ -0.84
DDX42-207ENST00000578593 PRKRIP1Q9H875 184 aaPredicted RBP9.77□□□□□ -0.84
DDX42-207ENST00000578593 MMP14P50281 582 aa9.77□□□□□ -0.85
DDX42-207ENST00000578593 PPP4R3BQ5MIZ7 849 aa9.77□□□□□ -0.85
DDX42-207ENST00000578593 NCOA2Q15596 1464 aa9.77□□□□□ -0.85
DDX42-207ENST00000578593 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
DDX42-207ENST00000578593 UTP14CQ5TAP6 766 aaKnown RBP9.76□□□□□ -0.85
DDX42-207ENST00000578593 FAM193AP78312 1265 aa9.76□□□□□ -0.85
DDX42-207ENST00000578593 SLC52A1Q9NWF4 448 aa9.76□□□□□ -0.85
DDX42-207ENST00000578593 CCDC18Q5T9S5 1454 aa9.76□□□□□ -0.85
DDX42-207ENST00000578593 LRRIQ1Q96JM4 1722 aa9.76□□□□□ -0.85
DDX42-207ENST00000578593 CFAP44Q96MT7 982 aa9.76□□□□□ -0.85
DDX42-207ENST00000578593 FAM43BQ6ZT52 329 aaPredicted RBP9.75□□□□□ -0.85
DDX42-207ENST00000578593 WDR62O43379 1518 aa9.75□□□□□ -0.85
DDX42-207ENST00000578593 UACAQ9BZF9 1416 aa9.74□□□□□ -0.85
DDX42-207ENST00000578593 CLGNO14967 610 aa9.74□□□□□ -0.85
DDX42-207ENST00000578593 TPM2P07951 284 aa9.74□□□□□ -0.85
DDX42-207ENST00000578593 HDAC5Q9UQL6 1122 aa9.73□□□□□ -0.85
DDX42-207ENST00000578593 SMG6Q86US8 1419 aaKnown RBP9.73□□□□□ -0.85
DDX42-207ENST00000578593 PHF23Q9BUL5 403 aaPredicted RBP9.73□□□□□ -0.85
DDX42-207ENST00000578593 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
DDX42-207ENST00000578593 RNF123Q5XPI4 1314 aa9.72□□□□□ -0.85
DDX42-207ENST00000578593 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
DDX42-207ENST00000578593 TMEM132AQ24JP5 1023 aa9.72□□□□□ -0.85
DDX42-207ENST00000578593 ATP1B4Q9UN42 357 aaPredicted RBP9.72□□□□□ -0.85
DDX42-207ENST00000578593 DMTNQ08495 405 aa9.72□□□□□ -0.85
DDX42-207ENST00000578593 ZNF592Q92610 1267 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms