RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 HNRNPUL2Q1KMD3 747 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-209ENST00000578329 KDM5CP41229 1560 aa7.46□□□□□ -1.21
PPP4R1-209ENST00000578329 FMN1Q68DA7 1419 aa7.46□□□□□ -1.21
PPP4R1-209ENST00000578329 UBTFP17480 764 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-209ENST00000578329 RIMS1Q86UR5 1692 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-209ENST00000578329 ZFYVE16Q7Z3T8 1539 aa7.46□□□□□ -1.22
PPP4R1-209ENST00000578329 CASKIN1Q8WXD9 1431 aa7.45□□□□□ -1.22
PPP4R1-209ENST00000578329 MYO5CQ9NQX4 1742 aa7.45□□□□□ -1.22
PPP4R1-209ENST00000578329 CFAP74Q9C0B2 1584 aa7.45□□□□□ -1.22
PPP4R1-209ENST00000578329 TRAPPC8Q9Y2L5 1435 aa7.44□□□□□ -1.22
PPP4R1-209ENST00000578329 MAGI2Q86UL8 1455 aa7.44□□□□□ -1.22
PPP4R1-209ENST00000578329 AFAP1Q8N556 730 aa7.44□□□□□ -1.22
PPP4R1-209ENST00000578329 DIP2CQ9Y2E4 1556 aa7.44□□□□□ -1.22
PPP4R1-209ENST00000578329 ABCA6Q8N139 1617 aa7.43□□□□□ -1.22
PPP4R1-209ENST00000578329 CDC42BPAQ5VT25 1732 aa7.43□□□□□ -1.22
PPP4R1-209ENST00000578329 ABCC1P33527 1531 aa7.42□□□□□ -1.22
PPP4R1-209ENST00000578329 PREX2Q70Z35 1606 aa7.42□□□□□ -1.22
PPP4R1-209ENST00000578329 ATP10AO60312 1499 aa7.42□□□□□ -1.22
PPP4R1-209ENST00000578329 KIDINS220Q9ULH0 1771 aa7.41□□□□□ -1.22
PPP4R1-209ENST00000578329 HSPA2P54652 639 aa7.41□□□□□ -1.22
PPP4R1-209ENST00000578329 GPATCH8Q9UKJ3 1502 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-209ENST00000578329 SAMD9LQ8IVG5 1584 aa7.41□□□□□ -1.22
PPP4R1-209ENST00000578329 ITSN2Q9NZM3 1697 aa7.41□□□□□ -1.22
PPP4R1-209ENST00000578329 CEBPAP49715 358 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-209ENST00000578329 EFCAB2Q5VUJ9 269 aa7.4□□□□□ -1.22
PPP4R1-209ENST00000578329 C9orf84Q5VXU9 1444 aa7.4□□□□□ -1.22
PPP4R1-209ENST00000578329 FYCO1Q9BQS8 1478 aa7.4□□□□□ -1.22
PPP4R1-209ENST00000578329 MLH3Q9UHC1 1453 aa7.4□□□□□ -1.22
PPP4R1-209ENST00000578329 ARHGAP5Q13017 1502 aa7.4□□□□□ -1.22
PPP4R1-209ENST00000578329 REREQ9P2R6 1566 aa7.4□□□□□ -1.22
PPP4R1-209ENST00000578329 FER1L4A9Z1Z3 1794 aa7.4□□□□□ -1.23
PPP4R1-209ENST00000578329 ZNF518AQ6AHZ1 1483 aa7.39□□□□□ -1.23
PPP4R1-209ENST00000578329 CLIP1P30622 1438 aa7.39□□□□□ -1.23
PPP4R1-209ENST00000578329 ARID4BQ4LE39 1312 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-209ENST00000578329 ATP1B4Q9UN42 357 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-209ENST00000578329 STRCQ7RTU9 1775 aa7.38□□□□□ -1.23
PPP4R1-209ENST00000578329 MLECQ14165 292 aa7.38□□□□□ -1.23
PPP4R1-209ENST00000578329 AGLP35573 1532 aa7.37□□□□□ -1.23
PPP4R1-209ENST00000578329 CCDC18Q5T9S5 1454 aa7.37□□□□□ -1.23
PPP4R1-209ENST00000578329 SYCP2Q9BX26 1530 aa7.37□□□□□ -1.23
PPP4R1-209ENST00000578329 MBD5Q9P267 1494 aa7.36□□□□□ -1.23
PPP4R1-209ENST00000578329 ZNF644Q9H582 1327 aaPredicted RBP7.36□□□□□ -1.23
PPP4R1-209ENST00000578329 C3P01024 1663 aa7.36□□□□□ -1.23
PPP4R1-209ENST00000578329 INO80Q9ULG1 1556 aaPredicted RBP7.36□□□□□ -1.23
PPP4R1-209ENST00000578329 PLXNC1O60486 1568 aa7.35□□□□□ -1.23
PPP4R1-209ENST00000578329 TIAM1Q13009 1591 aa7.35□□□□□ -1.23
PPP4R1-209ENST00000578329 HNRNPMP52272 730 aaKnown RBP eCLIP7.34□□□□□ -1.23
PPP4R1-209ENST00000578329 PLPPR3Q6T4P5 718 aa7.34□□□□□ -1.23
PPP4R1-209ENST00000578329 CDK11AQ9UQ88 783 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-209ENST00000578329 PREX1Q8TCU6 1659 aa7.33□□□□□ -1.24
PPP4R1-209ENST00000578329 CEP162Q5TB80 1403 aa7.33□□□□□ -1.24
PPP4R1-209ENST00000578329 KIAA1107Q9UPP5 1409 aa7.33□□□□□ -1.24
PPP4R1-209ENST00000578329 FBXO41Q8TF61 875 aa7.32□□□□□ -1.24
PPP4R1-209ENST00000578329 ATP7AQ04656 1500 aa7.32□□□□□ -1.24
PPP4R1-209ENST00000578329 LOC105371045A0A1W2PR82 267 aa7.31□□□□□ -1.24
PPP4R1-209ENST00000578329 LTBP4Q8N2S1 1624 aa7.3□□□□□ -1.24
PPP4R1-209ENST00000578329 SUPT6HQ7KZ85 1726 aaKnown RBP7.3□□□□□ -1.24
PPP4R1-209ENST00000578329 SETD1BQ9UPS6 1966 aaKnown RBP7.3□□□□□ -1.24
PPP4R1-209ENST00000578329 PTPRKQ15262 1439 aa7.29□□□□□ -1.24
PPP4R1-209ENST00000578329 EHBP1L1Q8N3D4 1523 aa7.29□□□□□ -1.24
PPP4R1-209ENST00000578329 ZNF777Q9ULD5 760 aaPredicted RBP7.29□□□□□ -1.24
PPP4R1-209ENST00000578329 A2MP01023 1474 aa7.29□□□□□ -1.24
PPP4R1-209ENST00000578329 NCOA2Q15596 1464 aa7.29□□□□□ -1.24
PPP4R1-209ENST00000578329 MROH2AA6NES4 1674 aa7.28□□□□□ -1.24
PPP4R1-209ENST00000578329 ADGBQ8N7X0 1667 aa7.28□□□□□ -1.24
PPP4R1-209ENST00000578329 KANK4Q5T7N3 995 aaPredicted RBP7.28□□□□□ -1.24
PPP4R1-209ENST00000578329 CFDP1Q9UEE9 299 aaPredicted RBP7.28□□□□□ -1.24
PPP4R1-209ENST00000578329 ZMYM3Q14202 1370 aa7.28□□□□□ -1.24
PPP4R1-209ENST00000578329 CCNB3Q8WWL7 1395 aa7.28□□□□□ -1.24
PPP4R1-209ENST00000578329 CLTCQ00610 1675 aaKnown RBP7.28□□□□□ -1.24
PPP4R1-209ENST00000578329 SPAG9O60271 1321 aaKnown RBP7.27□□□□□ -1.24
PPP4R1-209ENST00000578329 NCOA1Q15788 1441 aa7.27□□□□□ -1.24
PPP4R1-209ENST00000578329 CERKQ8TCT0 537 aa7.27□□□□□ -1.25
PPP4R1-209ENST00000578329 MTUS2Q5JR59 1369 aa7.27□□□□□ -1.25
PPP4R1-209ENST00000578329 UHRF1BP1Q6BDS2 1440 aa7.27□□□□□ -1.25
PPP4R1-209ENST00000578329 CAMSAP2Q08AD1 1489 aa7.26□□□□□ -1.25
PPP4R1-209ENST00000578329 PTPRTO14522 1441 aa7.26□□□□□ -1.25
PPP4R1-209ENST00000578329 NPATQ14207 1427 aa7.26□□□□□ -1.25
PPP4R1-209ENST00000578329 PLEKHH2Q8IVE3 1493 aa7.25□□□□□ -1.25
PPP4R1-209ENST00000578329 MROH1Q8NDA8 1641 aa7.25□□□□□ -1.25
PPP4R1-209ENST00000578329 MYO3AQ8NEV4 1616 aa7.25□□□□□ -1.25
PPP4R1-209ENST00000578329 RTEL1-TNFRSF6BF6WH68 1400 aa7.25□□□□□ -1.25
PPP4R1-209ENST00000578329 VPS8Q8N3P4 1428 aa7.25□□□□□ -1.25
PPP4R1-209ENST00000578329 CNTLNQ9NXG0 1405 aa7.25□□□□□ -1.25
PPP4R1-209ENST00000578329 ZNF142P52746 1687 aaPredicted RBP7.25□□□□□ -1.25
PPP4R1-209ENST00000578329 TCOF1Q13428 1488 aaKnown RBP7.24□□□□□ -1.25
PPP4R1-209ENST00000578329 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
PPP4R1-209ENST00000578329 CAMSAP1Q5T5Y3 1602 aa7.24□□□□□ -1.25
PPP4R1-209ENST00000578329 DHX29Q7Z478 1369 aaKnown RBP7.24□□□□□ -1.25
PPP4R1-209ENST00000578329 FBXO31Q5XUX0 539 aaPredicted RBP7.24□□□□□ -1.25
PPP4R1-209ENST00000578329 ARHGEF5Q12774 1597 aa7.24□□□□□ -1.25
PPP4R1-209ENST00000578329 NEURL4Q96JN8 1562 aa7.23□□□□□ -1.25
PPP4R1-209ENST00000578329 CEP170BQ9Y4F5 1589 aaPredicted RBP7.23□□□□□ -1.25
PPP4R1-209ENST00000578329 NCKAP5LQ9HCH0 1330 aa7.23□□□□□ -1.25
PPP4R1-209ENST00000578329 CCDC141Q6ZP82 1450 aa7.23□□□□□ -1.25
PPP4R1-209ENST00000578329 MYT1LQ9UL68 1186 aa7.22□□□□□ -1.25
PPP4R1-209ENST00000578329 DNMT1P26358 1616 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-209ENST00000578329 MAP3K1Q13233 1512 aa7.22□□□□□ -1.25
PPP4R1-209ENST00000578329 MAST1Q9Y2H9 1570 aa7.21□□□□□ -1.25
PPP4R1-209ENST00000578329 ALKQ9UM73 1620 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms