RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 C9orf84Q5VXU9 1444 aa18.64■□□□□ 0.57
SMARCE1-214ENST00000578112 FBXO41Q8TF61 875 aa18.64■□□□□ 0.57
SMARCE1-214ENST00000578112 ATP10AO60312 1499 aa18.64■□□□□ 0.57
SMARCE1-214ENST00000578112 TROQ12816 1431 aaPredicted RBP18.63■□□□□ 0.57
SMARCE1-214ENST00000578112 SCAPERQ9BY12 1400 aa18.63■□□□□ 0.57
SMARCE1-214ENST00000578112 FER1L4A9Z1Z3 1794 aa18.63■□□□□ 0.57
SMARCE1-214ENST00000578112 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
SMARCE1-214ENST00000578112 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
SMARCE1-214ENST00000578112 KDM5CP41229 1560 aa18.62■□□□□ 0.57
SMARCE1-214ENST00000578112 ZNF518AQ6AHZ1 1483 aa18.61■□□□□ 0.57
SMARCE1-214ENST00000578112 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
SMARCE1-214ENST00000578112 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
SMARCE1-214ENST00000578112 SIGLEC1Q9BZZ2 1709 aa18.58■□□□□ 0.57
SMARCE1-214ENST00000578112 PREX1Q8TCU6 1659 aa18.56■□□□□ 0.56
SMARCE1-214ENST00000578112 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
SMARCE1-214ENST00000578112 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
SMARCE1-214ENST00000578112 PREX2Q70Z35 1606 aa18.55■□□□□ 0.56
SMARCE1-214ENST00000578112 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
SMARCE1-214ENST00000578112 CASKIN1Q8WXD9 1431 aa18.54■□□□□ 0.56
SMARCE1-214ENST00000578112 MLH3Q9UHC1 1453 aa18.54■□□□□ 0.56
SMARCE1-214ENST00000578112 AGLP35573 1532 aa18.53■□□□□ 0.56
SMARCE1-214ENST00000578112 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
SMARCE1-214ENST00000578112 CDC42BPBQ9Y5S2 1711 aa18.51■□□□□ 0.55
SMARCE1-214ENST00000578112 DIP2CQ9Y2E4 1556 aa18.5■□□□□ 0.55
SMARCE1-214ENST00000578112 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
SMARCE1-214ENST00000578112 ABCC1P33527 1531 aa18.5■□□□□ 0.55
SMARCE1-214ENST00000578112 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
SMARCE1-214ENST00000578112 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
SMARCE1-214ENST00000578112 ABCA6Q8N139 1617 aa18.45■□□□□ 0.54
SMARCE1-214ENST00000578112 CNTLNQ9NXG0 1405 aa18.44■□□□□ 0.54
SMARCE1-214ENST00000578112 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
SMARCE1-214ENST00000578112 CDC42BPAQ5VT25 1732 aa18.42■□□□□ 0.54
SMARCE1-214ENST00000578112 ATP1B4Q9UN42 357 aaPredicted RBP18.42■□□□□ 0.54
SMARCE1-214ENST00000578112 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
SMARCE1-214ENST00000578112 MROH2AA6NES4 1674 aa18.41■□□□□ 0.54
SMARCE1-214ENST00000578112 UHRF1BP1Q6BDS2 1440 aa18.41■□□□□ 0.54
SMARCE1-214ENST00000578112 PLEKHH2Q8IVE3 1493 aa18.4■□□□□ 0.54
SMARCE1-214ENST00000578112 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
SMARCE1-214ENST00000578112 C3P01024 1663 aa18.38■□□□□ 0.53
SMARCE1-214ENST00000578112 PTPRTO14522 1441 aa18.37■□□□□ 0.53
SMARCE1-214ENST00000578112 KIAA1107Q9UPP5 1409 aa18.37■□□□□ 0.53
SMARCE1-214ENST00000578112 MLECQ14165 292 aa18.37■□□□□ 0.53
SMARCE1-214ENST00000578112 SAMD9LQ8IVG5 1584 aa18.36■□□□□ 0.53
SMARCE1-214ENST00000578112 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
SMARCE1-214ENST00000578112 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
SMARCE1-214ENST00000578112 NPATQ14207 1427 aa18.35■□□□□ 0.53
SMARCE1-214ENST00000578112 HSPA2P54652 639 aa18.34■□□□□ 0.53
SMARCE1-214ENST00000578112 CERKQ8TCT0 537 aa18.34■□□□□ 0.53
SMARCE1-214ENST00000578112 STRCQ7RTU9 1775 aa18.34■□□□□ 0.53
SMARCE1-214ENST00000578112 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
SMARCE1-214ENST00000578112 GPATCH8Q9UKJ3 1502 aaKnown RBP18.32■□□□□ 0.52
SMARCE1-214ENST00000578112 INO80Q9ULG1 1556 aaPredicted RBP18.31■□□□□ 0.52
SMARCE1-214ENST00000578112 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
SMARCE1-214ENST00000578112 ESF1Q9H501 851 aaKnown RBP18.3■□□□□ 0.52
SMARCE1-214ENST00000578112 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
SMARCE1-214ENST00000578112 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
SMARCE1-214ENST00000578112 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
SMARCE1-214ENST00000578112 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
SMARCE1-214ENST00000578112 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
SMARCE1-214ENST00000578112 ADGBQ8N7X0 1667 aa18.27■□□□□ 0.52
SMARCE1-214ENST00000578112 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
SMARCE1-214ENST00000578112 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
SMARCE1-214ENST00000578112 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
SMARCE1-214ENST00000578112 NCOA1Q15788 1441 aa18.24■□□□□ 0.51
SMARCE1-214ENST00000578112 CEBPAP49715 358 aaPredicted RBP18.23■□□□□ 0.51
SMARCE1-214ENST00000578112 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
SMARCE1-214ENST00000578112 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
SMARCE1-214ENST00000578112 A2MP01023 1474 aa18.23■□□□□ 0.51
SMARCE1-214ENST00000578112 RTEL1-TNFRSF6BF6WH68 1400 aa18.22■□□□□ 0.51
SMARCE1-214ENST00000578112 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
SMARCE1-214ENST00000578112 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
SMARCE1-214ENST00000578112 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
SMARCE1-214ENST00000578112 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
SMARCE1-214ENST00000578112 TIAM1Q13009 1591 aa18.19■□□□□ 0.5
SMARCE1-214ENST00000578112 MTUS2Q5JR59 1369 aa18.18■□□□□ 0.5
SMARCE1-214ENST00000578112 LTBP4Q8N2S1 1624 aa18.18■□□□□ 0.5
SMARCE1-214ENST00000578112 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
SMARCE1-214ENST00000578112 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
SMARCE1-214ENST00000578112 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
SMARCE1-214ENST00000578112 MYO3AQ8NEV4 1616 aa18.17■□□□□ 0.5
SMARCE1-214ENST00000578112 CAMSAP1Q5T5Y3 1602 aa18.15■□□□□ 0.5
SMARCE1-214ENST00000578112 PTPRKQ15262 1439 aa18.14■□□□□ 0.49
SMARCE1-214ENST00000578112 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.49
SMARCE1-214ENST00000578112 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
SMARCE1-214ENST00000578112 CEP170BQ9Y4F5 1589 aaPredicted RBP18.14■□□□□ 0.49
SMARCE1-214ENST00000578112 PKD2Q13563 968 aa18.13■□□□□ 0.49
SMARCE1-214ENST00000578112 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
SMARCE1-214ENST00000578112 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMARCE1-214ENST00000578112 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
SMARCE1-214ENST00000578112 ARHGEF5Q12774 1597 aa18.1■□□□□ 0.49
SMARCE1-214ENST00000578112 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
SMARCE1-214ENST00000578112 CCDC141Q6ZP82 1450 aa18.09■□□□□ 0.49
SMARCE1-214ENST00000578112 A2ML1A8K2U0 1454 aa18.09■□□□□ 0.49
SMARCE1-214ENST00000578112 KDM5DQ9BY66 1539 aa18.07■□□□□ 0.48
SMARCE1-214ENST00000578112 MAST1Q9Y2H9 1570 aa18.04■□□□□ 0.48
SMARCE1-214ENST00000578112 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
SMARCE1-214ENST00000578112 PZPP20742 1482 aa18.04■□□□□ 0.48
SMARCE1-214ENST00000578112 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
SMARCE1-214ENST00000578112 NCOA2Q15596 1464 aa18.03■□□□□ 0.48
SMARCE1-214ENST00000578112 DNMT1P26358 1616 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms