RNA–Protein interactions for RNA: ENST00000578085.1

CCR7-202, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 3

Gene CCR7, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-202ENST00000578085 SCAPERQ9BY12 1400 aa12.33□□□□□ -0.44
CCR7-202ENST00000578085 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
CCR7-202ENST00000578085 MAGI2Q86UL8 1455 aa12.32□□□□□ -0.44
CCR7-202ENST00000578085 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
CCR7-202ENST00000578085 ATP1B4Q9UN42 357 aaPredicted RBP12.3□□□□□ -0.44
CCR7-202ENST00000578085 MYO5CQ9NQX4 1742 aa12.3□□□□□ -0.44
CCR7-202ENST00000578085 TROQ12816 1431 aaPredicted RBP12.29□□□□□ -0.44
CCR7-202ENST00000578085 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
CCR7-202ENST00000578085 ARHGEF12Q9NZN5 1544 aa12.28□□□□□ -0.44
CCR7-202ENST00000578085 HSPA2P54652 639 aa12.28□□□□□ -0.44
CCR7-202ENST00000578085 MLECQ14165 292 aa12.28□□□□□ -0.44
CCR7-202ENST00000578085 KDM5CP41229 1560 aa12.27□□□□□ -0.44
CCR7-202ENST00000578085 FER1L4A9Z1Z3 1794 aa12.27□□□□□ -0.45
CCR7-202ENST00000578085 ATP10AO60312 1499 aa12.27□□□□□ -0.45
CCR7-202ENST00000578085 FBXO41Q8TF61 875 aa12.26□□□□□ -0.45
CCR7-202ENST00000578085 C9orf84Q5VXU9 1444 aa12.26□□□□□ -0.45
CCR7-202ENST00000578085 ARHGAP5Q13017 1502 aa12.26□□□□□ -0.45
CCR7-202ENST00000578085 EFCAB2Q5VUJ9 269 aa12.25□□□□□ -0.45
CCR7-202ENST00000578085 DIP2CQ9Y2E4 1556 aa12.25□□□□□ -0.45
CCR7-202ENST00000578085 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
CCR7-202ENST00000578085 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
CCR7-202ENST00000578085 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
CCR7-202ENST00000578085 ABCA6Q8N139 1617 aa12.23□□□□□ -0.45
CCR7-202ENST00000578085 PREX2Q70Z35 1606 aa12.22□□□□□ -0.45
CCR7-202ENST00000578085 ABCC1P33527 1531 aa12.22□□□□□ -0.45
CCR7-202ENST00000578085 CLIP1P30622 1438 aa12.22□□□□□ -0.45
CCR7-202ENST00000578085 CASKIN1Q8WXD9 1431 aa12.22□□□□□ -0.45
CCR7-202ENST00000578085 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.45
CCR7-202ENST00000578085 CEBPAP49715 358 aaPredicted RBP12.21□□□□□ -0.45
CCR7-202ENST00000578085 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.45
CCR7-202ENST00000578085 REREQ9P2R6 1566 aa12.19□□□□□ -0.46
CCR7-202ENST00000578085 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
CCR7-202ENST00000578085 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
CCR7-202ENST00000578085 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
CCR7-202ENST00000578085 PREX1Q8TCU6 1659 aa12.18□□□□□ -0.46
CCR7-202ENST00000578085 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
CCR7-202ENST00000578085 FYCO1Q9BQS8 1478 aa12.17□□□□□ -0.46
CCR7-202ENST00000578085 AGLP35573 1532 aa12.16□□□□□ -0.46
CCR7-202ENST00000578085 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
CCR7-202ENST00000578085 SAMD9LQ8IVG5 1584 aa12.15□□□□□ -0.46
CCR7-202ENST00000578085 C3P01024 1663 aa12.14□□□□□ -0.47
CCR7-202ENST00000578085 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
CCR7-202ENST00000578085 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
CCR7-202ENST00000578085 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
CCR7-202ENST00000578085 MYT1LQ9UL68 1186 aa12.12□□□□□ -0.47
CCR7-202ENST00000578085 UHRF1BP1Q6BDS2 1440 aa12.11□□□□□ -0.47
CCR7-202ENST00000578085 CERKQ8TCT0 537 aa12.11□□□□□ -0.47
CCR7-202ENST00000578085 INO80Q9ULG1 1556 aaPredicted RBP12.09□□□□□ -0.47
CCR7-202ENST00000578085 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
CCR7-202ENST00000578085 PLXNC1O60486 1568 aa12.08□□□□□ -0.48
CCR7-202ENST00000578085 HNRNPMP52272 730 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCR7-202ENST00000578085 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
CCR7-202ENST00000578085 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
CCR7-202ENST00000578085 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
CCR7-202ENST00000578085 SPAG9O60271 1321 aaKnown RBP12.05□□□□□ -0.48
CCR7-202ENST00000578085 NCOA1Q15788 1441 aa12.04□□□□□ -0.48
CCR7-202ENST00000578085 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
CCR7-202ENST00000578085 KIAA1107Q9UPP5 1409 aa12.04□□□□□ -0.48
CCR7-202ENST00000578085 ZNF644Q9H582 1327 aaPredicted RBP12.04□□□□□ -0.48
CCR7-202ENST00000578085 CCNB3Q8WWL7 1395 aa12.04□□□□□ -0.48
CCR7-202ENST00000578085 MROH2AA6NES4 1674 aa12.03□□□□□ -0.48
CCR7-202ENST00000578085 PTPRTO14522 1441 aa12.03□□□□□ -0.48
CCR7-202ENST00000578085 A2MP01023 1474 aa12.03□□□□□ -0.48
CCR7-202ENST00000578085 LTBP4Q8N2S1 1624 aa12.03□□□□□ -0.48
CCR7-202ENST00000578085 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.49
CCR7-202ENST00000578085 CLTCQ00610 1675 aaKnown RBP12.02□□□□□ -0.49
CCR7-202ENST00000578085 ZMYM3Q14202 1370 aa12.02□□□□□ -0.49
CCR7-202ENST00000578085 MTUS2Q5JR59 1369 aa12.02□□□□□ -0.49
CCR7-202ENST00000578085 NPATQ14207 1427 aa12.02□□□□□ -0.49
CCR7-202ENST00000578085 PLEKHH2Q8IVE3 1493 aa12.02□□□□□ -0.49
CCR7-202ENST00000578085 MBD5Q9P267 1494 aa12.02□□□□□ -0.49
CCR7-202ENST00000578085 CAMSAP1Q5T5Y3 1602 aa12.01□□□□□ -0.49
CCR7-202ENST00000578085 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
CCR7-202ENST00000578085 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
CCR7-202ENST00000578085 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
CCR7-202ENST00000578085 PTPRKQ15262 1439 aa12□□□□□ -0.49
CCR7-202ENST00000578085 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
CCR7-202ENST00000578085 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
CCR7-202ENST00000578085 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CCR7-202ENST00000578085 ZNF142P52746 1687 aaPredicted RBP11.98□□□□□ -0.49
CCR7-202ENST00000578085 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
CCR7-202ENST00000578085 CEP170BQ9Y4F5 1589 aaPredicted RBP11.96□□□□□ -0.49
CCR7-202ENST00000578085 NCKAP5LQ9HCH0 1330 aa11.96□□□□□ -0.49
CCR7-202ENST00000578085 GGT6Q6P531 493 aa11.96□□□□□ -0.49
CCR7-202ENST00000578085 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
CCR7-202ENST00000578085 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
CCR7-202ENST00000578085 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
CCR7-202ENST00000578085 PLA2R1Q13018 1463 aa11.94□□□□□ -0.5
CCR7-202ENST00000578085 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
CCR7-202ENST00000578085 ZNF335Q9H4Z2 1342 aaPredicted RBP11.93□□□□□ -0.5
CCR7-202ENST00000578085 CCDC141Q6ZP82 1450 aa11.93□□□□□ -0.5
CCR7-202ENST00000578085 DHX29Q7Z478 1369 aaKnown RBP11.92□□□□□ -0.5
CCR7-202ENST00000578085 IQSEC2Q5JU85 1478 aa11.92□□□□□ -0.5
CCR7-202ENST00000578085 ILDR2Q71H61 639 aa11.92□□□□□ -0.5
CCR7-202ENST00000578085 A2ML1A8K2U0 1454 aa11.9□□□□□ -0.5
CCR7-202ENST00000578085 DNMT1P26358 1616 aaKnown RBP11.9□□□□□ -0.5
CCR7-202ENST00000578085 KDM5DQ9BY66 1539 aa11.9□□□□□ -0.5
CCR7-202ENST00000578085 DISP3Q9P2K9 1392 aa11.9□□□□□ -0.5
CCR7-202ENST00000578085 NEURL4Q96JN8 1562 aa11.89□□□□□ -0.51
CCR7-202ENST00000578085 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms