RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 POGZQ7Z3K3 1410 aa33.04■■■□□ 2.88
LIMD2-202ENST00000578061 CDC42BPBQ9Y5S2 1711 aa33.02■■■□□ 2.88
LIMD2-202ENST00000578061 MTUS2Q5JR59 1369 aa33.01■■■□□ 2.88
LIMD2-202ENST00000578061 PREX2Q70Z35 1606 aa33■■■□□ 2.87
LIMD2-202ENST00000578061 ZMYM4Q5VZL5 1548 aa33■■■□□ 2.87
LIMD2-202ENST00000578061 ARHGEF40Q8TER5 1519 aa33■■■□□ 2.87
LIMD2-202ENST00000578061 ARID4BQ4LE39 1312 aaPredicted RBP33■■■□□ 2.87
LIMD2-202ENST00000578061 YEATS2Q9ULM3 1422 aa32.99■■■□□ 2.87
LIMD2-202ENST00000578061 ZFYVE16Q7Z3T8 1539 aa32.97■■■□□ 2.87
LIMD2-202ENST00000578061 CDC42BPAQ5VT25 1732 aa32.95■■■□□ 2.87
LIMD2-202ENST00000578061 AFAP1Q8N556 730 aa32.95■■■□□ 2.87
LIMD2-202ENST00000578061 ZNF777Q9ULD5 760 aaPredicted RBP32.94■■■□□ 2.86
LIMD2-202ENST00000578061 VPS8Q8N3P4 1428 aa32.92■■■□□ 2.86
LIMD2-202ENST00000578061 MAGI2Q86UL8 1455 aa32.92■■■□□ 2.86
LIMD2-202ENST00000578061 GPATCH8Q9UKJ3 1502 aaKnown RBP32.92■■■□□ 2.86
LIMD2-202ENST00000578061 ARHGEF12Q9NZN5 1544 aa32.89■■■□□ 2.86
LIMD2-202ENST00000578061 ZNF518AQ6AHZ1 1483 aa32.89■■■□□ 2.86
LIMD2-202ENST00000578061 CCNB3Q8WWL7 1395 aa32.89■■■□□ 2.86
LIMD2-202ENST00000578061 ABCC1P33527 1531 aa32.87■■■□□ 2.85
LIMD2-202ENST00000578061 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
LIMD2-202ENST00000578061 MYT1LQ9UL68 1186 aa32.87■■■□□ 2.85
LIMD2-202ENST00000578061 TRAPPC8Q9Y2L5 1435 aa32.85■■■□□ 2.85
LIMD2-202ENST00000578061 CFDP1Q9UEE9 299 aaPredicted RBP32.84■■■□□ 2.85
LIMD2-202ENST00000578061 BCORL1Q5H9F3 1711 aa32.82■■■□□ 2.85
LIMD2-202ENST00000578061 ADAMTSL3P82987 1691 aa32.82■■■□□ 2.84
LIMD2-202ENST00000578061 KDM5CP41229 1560 aa32.82■■■□□ 2.84
LIMD2-202ENST00000578061 SIGLEC1Q9BZZ2 1709 aa32.82■■■□□ 2.84
LIMD2-202ENST00000578061 SAMD9LQ8IVG5 1584 aa32.81■■■□□ 2.84
LIMD2-202ENST00000578061 ITSN2Q9NZM3 1697 aa32.81■■■□□ 2.84
LIMD2-202ENST00000578061 TIAM1Q13009 1591 aa32.8■■■□□ 2.84
LIMD2-202ENST00000578061 ATP10AO60312 1499 aa32.8■■■□□ 2.84
LIMD2-202ENST00000578061 HNRNPMP52272 730 aaKnown RBP eCLIP32.77■■■□□ 2.84
LIMD2-202ENST00000578061 MLECQ14165 292 aa32.77■■■□□ 2.84
LIMD2-202ENST00000578061 SYCP2Q9BX26 1530 aa32.76■■■□□ 2.83
LIMD2-202ENST00000578061 HECW2Q9P2P5 1572 aa32.75■■■□□ 2.83
LIMD2-202ENST00000578061 MADDQ8WXG6 1647 aa32.75■■■□□ 2.83
LIMD2-202ENST00000578061 C9orf84Q5VXU9 1444 aa32.75■■■□□ 2.83
LIMD2-202ENST00000578061 PTPRMP28827 1452 aa32.73■■■□□ 2.83
LIMD2-202ENST00000578061 NCOA2Q15596 1464 aa32.73■■■□□ 2.83
LIMD2-202ENST00000578061 MLH3Q9UHC1 1453 aa32.72■■■□□ 2.83
LIMD2-202ENST00000578061 ZNF644Q9H582 1327 aaPredicted RBP32.72■■■□□ 2.83
LIMD2-202ENST00000578061 DIP2CQ9Y2E4 1556 aa32.7■■■□□ 2.82
LIMD2-202ENST00000578061 SUPT6HQ7KZ85 1726 aaKnown RBP32.68■■■□□ 2.82
LIMD2-202ENST00000578061 LRRC9Q6ZRR7 1453 aa32.68■■■□□ 2.82
LIMD2-202ENST00000578061 KANK4Q5T7N3 995 aaPredicted RBP32.68■■■□□ 2.82
LIMD2-202ENST00000578061 ABCA6Q8N139 1617 aa32.68■■■□□ 2.82
LIMD2-202ENST00000578061 KIAA1107Q9UPP5 1409 aa32.67■■■□□ 2.82
LIMD2-202ENST00000578061 PLEKHH2Q8IVE3 1493 aa32.67■■■□□ 2.82
LIMD2-202ENST00000578061 RIMS1Q86UR5 1692 aaKnown RBP32.65■■■□□ 2.82
LIMD2-202ENST00000578061 SPAG9O60271 1321 aaKnown RBP32.64■■■□□ 2.82
LIMD2-202ENST00000578061 PLPPR3Q6T4P5 718 aa32.64■■■□□ 2.82
LIMD2-202ENST00000578061 KIDINS220Q9ULH0 1771 aa32.63■■■□□ 2.81
LIMD2-202ENST00000578061 MAP3K1Q13233 1512 aa32.6■■■□□ 2.81
LIMD2-202ENST00000578061 APLP2Q06481 763 aa32.56■■■□□ 2.8
LIMD2-202ENST00000578061 REREQ9P2R6 1566 aa32.55■■■□□ 2.8
LIMD2-202ENST00000578061 MBD5Q9P267 1494 aa32.54■■■□□ 2.8
LIMD2-202ENST00000578061 FER1L4A9Z1Z3 1794 aa32.53■■■□□ 2.8
LIMD2-202ENST00000578061 ATP7AQ04656 1500 aa32.53■■■□□ 2.8
LIMD2-202ENST00000578061 CAMSAP2Q08AD1 1489 aa32.52■■■□□ 2.8
LIMD2-202ENST00000578061 INO80Q9ULG1 1556 aaPredicted RBP32.49■■■□□ 2.79
LIMD2-202ENST00000578061 AGLP35573 1532 aa32.47■■■□□ 2.79
LIMD2-202ENST00000578061 CEBPAP49715 358 aaPredicted RBP32.43■■■□□ 2.78
LIMD2-202ENST00000578061 CCDC141Q6ZP82 1450 aa32.42■■■□□ 2.78
LIMD2-202ENST00000578061 MYOM3Q5VTT5 1437 aa32.4■■■□□ 2.78
LIMD2-202ENST00000578061 A2MP01023 1474 aa32.4■■■□□ 2.78
LIMD2-202ENST00000578061 ESF1Q9H501 851 aaKnown RBP32.37■■■□□ 2.77
LIMD2-202ENST00000578061 RTEL1-TNFRSF6BF6WH68 1400 aa32.35■■■□□ 2.77
LIMD2-202ENST00000578061 RSPH4AQ5TD94 716 aa32.35■■■□□ 2.77
LIMD2-202ENST00000578061 PLXNC1O60486 1568 aa32.34■■■□□ 2.77
LIMD2-202ENST00000578061 LMTK3Q96Q04 1460 aa32.34■■■□□ 2.77
LIMD2-202ENST00000578061 MIA2Q96PC5 1412 aa32.33■■■□□ 2.77
LIMD2-202ENST00000578061 ARHGEF5Q12774 1597 aa32.32■■■□□ 2.77
LIMD2-202ENST00000578061 ADGBQ8N7X0 1667 aa32.31■■■□□ 2.76
LIMD2-202ENST00000578061 TSPY4P0CV99 314 aa32.3■■■□□ 2.76
LIMD2-202ENST00000578061 TSPY10P0CW01 314 aa32.3■■■□□ 2.76
LIMD2-202ENST00000578061 GGT6Q6P531 493 aa32.29■■■□□ 2.76
LIMD2-202ENST00000578061 HSPA2P54652 639 aa32.27■■■□□ 2.76
LIMD2-202ENST00000578061 DHX29Q7Z478 1369 aaKnown RBP32.26■■■□□ 2.75
LIMD2-202ENST00000578061 CNTLNQ9NXG0 1405 aa32.23■■■□□ 2.75
LIMD2-202ENST00000578061 C3P01024 1663 aa32.22■■■□□ 2.75
LIMD2-202ENST00000578061 PTPN23Q9H3S7 1636 aa32.19■■■□□ 2.74
LIMD2-202ENST00000578061 KIF3BO15066 747 aa32.19■■■□□ 2.74
LIMD2-202ENST00000578061 FGD6Q6ZV73 1430 aa32.18■■■□□ 2.74
LIMD2-202ENST00000578061 ZMYM3Q14202 1370 aa32.16■■■□□ 2.74
LIMD2-202ENST00000578061 CLTCQ00610 1675 aaKnown RBP32.15■■■□□ 2.74
LIMD2-202ENST00000578061 MAST1Q9Y2H9 1570 aa32.15■■■□□ 2.74
LIMD2-202ENST00000578061 PREX1Q8TCU6 1659 aa32.14■■■□□ 2.74
LIMD2-202ENST00000578061 ABCC5O15440 1437 aa32.11■■■□□ 2.73
LIMD2-202ENST00000578061 MROH2AA6NES4 1674 aa32.11■■■□□ 2.73
LIMD2-202ENST00000578061 UHRF1BP1Q6BDS2 1440 aa32.1■■■□□ 2.73
LIMD2-202ENST00000578061 TCOF1Q13428 1488 aaKnown RBP32.1■■■□□ 2.73
LIMD2-202ENST00000578061 PPP6R1Q9UPN7 881 aa32.09■■■□□ 2.73
LIMD2-202ENST00000578061 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.72
LIMD2-202ENST00000578061 DAPK1P53355 1430 aa32.06■■■□□ 2.72
LIMD2-202ENST00000578061 FAM50AQ14320 339 aaKnown RBP32.04■■■□□ 2.72
LIMD2-202ENST00000578061 SETD1BQ9UPS6 1966 aaKnown RBP32.03■■■□□ 2.72
LIMD2-202ENST00000578061 DNMT1P26358 1616 aaKnown RBP32.03■■■□□ 2.72
LIMD2-202ENST00000578061 CROCC2H7BZ55 1655 aa32.02■■■□□ 2.72
LIMD2-202ENST00000578061 RRP7BPQ9NSQ0 103 aa32.02■■■□□ 2.72
LIMD2-202ENST00000578061 CHIC2Q9UKJ5 165 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms