RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
IFT20-205ENST00000578009 NLRP6P59044 892 aa11.18□□□□□ -0.62
IFT20-205ENST00000578009 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
IFT20-205ENST00000578009 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
IFT20-205ENST00000578009 STK24Q9Y6E0 443 aa11.17□□□□□ -0.62
IFT20-205ENST00000578009 GPR153Q6NV75 609 aa11.15□□□□□ -0.62
IFT20-205ENST00000578009 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
IFT20-205ENST00000578009 STK25O00506 426 aa11.12□□□□□ -0.63
IFT20-205ENST00000578009 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
IFT20-205ENST00000578009 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
IFT20-205ENST00000578009 ZNF687Q8N1G0 1237 aa11.1□□□□□ -0.63
IFT20-205ENST00000578009 MFRPQ9BY79 579 aa11.09□□□□□ -0.63
IFT20-205ENST00000578009 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
IFT20-205ENST00000578009 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
IFT20-205ENST00000578009 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
IFT20-205ENST00000578009 C2orf72A6NCS6 295 aa11.02□□□□□ -0.65
IFT20-205ENST00000578009 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
IFT20-205ENST00000578009 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
IFT20-205ENST00000578009 RGL2O15211 777 aa11□□□□□ -0.65
IFT20-205ENST00000578009 KIF3CO14782 793 aa10.98□□□□□ -0.65
IFT20-205ENST00000578009 PKD2Q13563 968 aa10.98□□□□□ -0.65
IFT20-205ENST00000578009 NUDT7P0C024 238 aa10.97□□□□□ -0.65
IFT20-205ENST00000578009 TMC2Q8TDI7 906 aa10.96□□□□□ -0.65
IFT20-205ENST00000578009 PTGER2P43116 358 aa10.94□□□□□ -0.66
IFT20-205ENST00000578009 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
IFT20-205ENST00000578009 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
IFT20-205ENST00000578009 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
IFT20-205ENST00000578009 PPP1R37O75864 691 aa10.9□□□□□ -0.66
IFT20-205ENST00000578009 SLC34A2O95436 690 aa10.89□□□□□ -0.67
IFT20-205ENST00000578009 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
IFT20-205ENST00000578009 PBX2P40425 430 aa10.86□□□□□ -0.67
IFT20-205ENST00000578009 POTEEQ6S8J3 1075 aa10.83□□□□□ -0.68
IFT20-205ENST00000578009 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
IFT20-205ENST00000578009 PLPP6Q8IY26 295 aa10.77□□□□□ -0.69
IFT20-205ENST00000578009 ARHGAP33O14559 1287 aa10.76□□□□□ -0.69
IFT20-205ENST00000578009 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
IFT20-205ENST00000578009 PTCD2Q8WV60 388 aaKnown RBP10.75□□□□□ -0.69
IFT20-205ENST00000578009 FOXK1P85037 733 aa10.74□□□□□ -0.69
IFT20-205ENST00000578009 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
IFT20-205ENST00000578009 GPHNQ9NQX3 736 aaPredicted RBP10.74□□□□□ -0.69
IFT20-205ENST00000578009 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
IFT20-205ENST00000578009 KDM4FA0A1W2PPD8 638 aa10.72□□□□□ -0.69
IFT20-205ENST00000578009 DSG2Q14126 1118 aa10.72□□□□□ -0.69
IFT20-205ENST00000578009 PSEN2P49810 448 aa10.71□□□□□ -0.69
IFT20-205ENST00000578009 TBC1D12O60347 775 aa10.7□□□□□ -0.7
IFT20-205ENST00000578009 HCSTQ9UBK5 93 aa10.7□□□□□ -0.7
IFT20-205ENST00000578009 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
IFT20-205ENST00000578009 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
IFT20-205ENST00000578009 PLA2G2EQ9NZK7 142 aa10.67□□□□□ -0.7
IFT20-205ENST00000578009 TK2O00142 265 aa10.66□□□□□ -0.7
IFT20-205ENST00000578009 STAC3Q96MF2 364 aa10.64□□□□□ -0.71
IFT20-205ENST00000578009 UPF1Q92900 1129 aaKnown RBP eCLIP10.63□□□□□ -0.71
IFT20-205ENST00000578009 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
IFT20-205ENST00000578009 KCNK17Q96T54 332 aa10.63□□□□□ -0.71
IFT20-205ENST00000578009 HRO43593 1189 aa10.62□□□□□ -0.71
IFT20-205ENST00000578009 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
IFT20-205ENST00000578009 KCTD12Q96CX2 325 aaKnown RBP10.61□□□□□ -0.71
IFT20-205ENST00000578009 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
IFT20-205ENST00000578009 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
IFT20-205ENST00000578009 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
IFT20-205ENST00000578009 PPP1R15BQ5SWA1 713 aa10.56□□□□□ -0.72
IFT20-205ENST00000578009 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
IFT20-205ENST00000578009 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
IFT20-205ENST00000578009 DNAJC5Q9H3Z4 198 aa10.55□□□□□ -0.72
IFT20-205ENST00000578009 VPS9D1Q9Y2B5 631 aa10.54□□□□□ -0.72
IFT20-205ENST00000578009 PDE4AP27815 886 aa10.51□□□□□ -0.73
IFT20-205ENST00000578009 PTPN5P54829 565 aa10.51□□□□□ -0.73
IFT20-205ENST00000578009 BCL2L12Q9HB09 334 aa10.5□□□□□ -0.73
IFT20-205ENST00000578009 NCKAP5LQ9HCH0 1330 aa10.5□□□□□ -0.73
IFT20-205ENST00000578009 PTPREP23469 700 aa10.48□□□□□ -0.73
IFT20-205ENST00000578009 FOSBP53539 338 aa10.48□□□□□ -0.73
IFT20-205ENST00000578009 EVI5O60447 810 aa10.46□□□□□ -0.73
IFT20-205ENST00000578009 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.73
IFT20-205ENST00000578009 GOLGA8CPA6NN73 597 aa10.45□□□□□ -0.74
IFT20-205ENST00000578009 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
IFT20-205ENST00000578009 JPH4Q96JJ6 628 aa10.44□□□□□ -0.74
IFT20-205ENST00000578009 GTPBP6O43824 516 aaPredicted RBP10.43□□□□□ -0.74
IFT20-205ENST00000578009 MAP3K9P80192 1104 aa10.43□□□□□ -0.74
IFT20-205ENST00000578009 ZDHHC16Q969W1 377 aa10.43□□□□□ -0.74
IFT20-205ENST00000578009 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
IFT20-205ENST00000578009 ZBED2Q9BTP6 218 aa10.43□□□□□ -0.74
IFT20-205ENST00000578009 ANO8Q9HCE9 1232 aaPredicted RBP10.43□□□□□ -0.74
IFT20-205ENST00000578009 MRPL50Q8N5N7 158 aaKnown RBP10.42□□□□□ -0.74
IFT20-205ENST00000578009 ADAM33Q9BZ11 813 aa10.42□□□□□ -0.74
IFT20-205ENST00000578009 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
IFT20-205ENST00000578009 WNT2BQ93097 391 aa10.41□□□□□ -0.74
IFT20-205ENST00000578009 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.74
IFT20-205ENST00000578009 THSD4Q6ZMP0 1018 aa10.4□□□□□ -0.74
IFT20-205ENST00000578009 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
IFT20-205ENST00000578009 MFSD10Q14728 455 aa10.35□□□□□ -0.75
IFT20-205ENST00000578009 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
IFT20-205ENST00000578009 PCDHGA10Q9Y5H3 936 aa10.32□□□□□ -0.76
IFT20-205ENST00000578009 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
IFT20-205ENST00000578009 PROX2Q3B8N5 592 aa10.31□□□□□ -0.76
IFT20-205ENST00000578009 COL9A1P20849 921 aa10.29□□□□□ -0.76
IFT20-205ENST00000578009 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
IFT20-205ENST00000578009 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
IFT20-205ENST00000578009 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
IFT20-205ENST00000578009 RABGEF1Q9UJ41 708 aa10.28□□□□□ -0.76
IFT20-205ENST00000578009 RGS20O76081 388 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms