RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TSPOAP1O95153 1857 aa19.82■□□□□ 0.76
MKS1-206ENST00000577824 FANCAO15360 1455 aa19.82■□□□□ 0.76
MKS1-206ENST00000577824 CCNB3Q8WWL7 1395 aa19.82■□□□□ 0.76
MKS1-206ENST00000577824 MYOM3Q5VTT5 1437 aa19.8■□□□□ 0.76
MKS1-206ENST00000577824 ARHGAP5Q13017 1502 aa19.8■□□□□ 0.76
MKS1-206ENST00000577824 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
MKS1-206ENST00000577824 MIA2Q96PC5 1412 aa19.77■□□□□ 0.76
MKS1-206ENST00000577824 SAMD9LQ8IVG5 1584 aa19.77■□□□□ 0.76
MKS1-206ENST00000577824 ABCC1P33527 1531 aa19.76■□□□□ 0.75
MKS1-206ENST00000577824 AKNAQ7Z591 1439 aa19.74■□□□□ 0.75
MKS1-206ENST00000577824 FGD6Q6ZV73 1430 aa19.73■□□□□ 0.75
MKS1-206ENST00000577824 EFCAB2Q5VUJ9 269 aa19.72■□□□□ 0.75
MKS1-206ENST00000577824 TCOF1Q13428 1488 aaKnown RBP19.72■□□□□ 0.75
MKS1-206ENST00000577824 PLEKHH2Q8IVE3 1493 aa19.72■□□□□ 0.75
MKS1-206ENST00000577824 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
MKS1-206ENST00000577824 ADGRL1O94910 1474 aa19.71■□□□□ 0.75
MKS1-206ENST00000577824 CAMSAP2Q08AD1 1489 aa19.71■□□□□ 0.75
MKS1-206ENST00000577824 FRMPD1Q5SYB0 1578 aa19.7■□□□□ 0.74
MKS1-206ENST00000577824 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
MKS1-206ENST00000577824 KDM6BO15054 1643 aa19.69■□□□□ 0.74
MKS1-206ENST00000577824 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
MKS1-206ENST00000577824 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
MKS1-206ENST00000577824 SYCP2Q9BX26 1530 aa19.68■□□□□ 0.74
MKS1-206ENST00000577824 POGZQ7Z3K3 1410 aa19.68■□□□□ 0.74
MKS1-206ENST00000577824 COL17A1Q9UMD9 1497 aaPredicted RBP19.67■□□□□ 0.74
MKS1-206ENST00000577824 ARHGEF12Q9NZN5 1544 aa19.67■□□□□ 0.74
MKS1-206ENST00000577824 KDM5CP41229 1560 aa19.66■□□□□ 0.74
MKS1-206ENST00000577824 ARHGEF5Q12774 1597 aa19.66■□□□□ 0.74
MKS1-206ENST00000577824 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
MKS1-206ENST00000577824 MBD5Q9P267 1494 aa19.66■□□□□ 0.74
MKS1-206ENST00000577824 ZMYM4Q5VZL5 1548 aa19.66■□□□□ 0.74
MKS1-206ENST00000577824 RRBP1Q9P2E9 1410 aaKnown RBP19.65■□□□□ 0.74
MKS1-206ENST00000577824 ZNF518AQ6AHZ1 1483 aa19.65■□□□□ 0.74
MKS1-206ENST00000577824 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
MKS1-206ENST00000577824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.63■□□□□ 0.73
MKS1-206ENST00000577824 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
MKS1-206ENST00000577824 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
MKS1-206ENST00000577824 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
MKS1-206ENST00000577824 TRAPPC8Q9Y2L5 1435 aa19.59■□□□□ 0.73
MKS1-206ENST00000577824 CROCC2H7BZ55 1655 aa19.59■□□□□ 0.73
MKS1-206ENST00000577824 DNMT1P26358 1616 aaKnown RBP19.59■□□□□ 0.73
MKS1-206ENST00000577824 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
MKS1-206ENST00000577824 SHANK2Q9UPX8 1470 aa19.57■□□□□ 0.72
MKS1-206ENST00000577824 HECW2Q9P2P5 1572 aa19.57■□□□□ 0.72
MKS1-206ENST00000577824 MAST1Q9Y2H9 1570 aa19.57■□□□□ 0.72
MKS1-206ENST00000577824 MAGI2Q86UL8 1455 aa19.56■□□□□ 0.72
MKS1-206ENST00000577824 ZNF777Q9ULD5 760 aaPredicted RBP19.56■□□□□ 0.72
MKS1-206ENST00000577824 ZFYVE16Q7Z3T8 1539 aa19.56■□□□□ 0.72
MKS1-206ENST00000577824 MLH3Q9UHC1 1453 aa19.55■□□□□ 0.72
MKS1-206ENST00000577824 ARHGEF40Q8TER5 1519 aa19.54■□□□□ 0.72
MKS1-206ENST00000577824 RSPH4AQ5TD94 716 aa19.53■□□□□ 0.72
MKS1-206ENST00000577824 DAPK1P53355 1430 aa19.52■□□□□ 0.72
MKS1-206ENST00000577824 RAPGEF3O95398 923 aa19.52■□□□□ 0.72
MKS1-206ENST00000577824 KIDINS220Q9ULH0 1771 aa19.52■□□□□ 0.71
MKS1-206ENST00000577824 RTEL1-TNFRSF6BF6WH68 1400 aa19.51■□□□□ 0.71
MKS1-206ENST00000577824 ABCC5O15440 1437 aa19.51■□□□□ 0.71
MKS1-206ENST00000577824 ATP7AQ04656 1500 aa19.51■□□□□ 0.71
MKS1-206ENST00000577824 HNRNPMP52272 730 aaKnown RBP eCLIP19.51■□□□□ 0.71
MKS1-206ENST00000577824 PLXNC1O60486 1568 aa19.49■□□□□ 0.71
MKS1-206ENST00000577824 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
MKS1-206ENST00000577824 ABCA6Q8N139 1617 aa19.48■□□□□ 0.71
MKS1-206ENST00000577824 REREQ9P2R6 1566 aa19.48■□□□□ 0.71
MKS1-206ENST00000577824 DIP2CQ9Y2E4 1556 aa19.48■□□□□ 0.71
MKS1-206ENST00000577824 C9orf84Q5VXU9 1444 aa19.47■□□□□ 0.71
MKS1-206ENST00000577824 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
MKS1-206ENST00000577824 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
MKS1-206ENST00000577824 YEATS2Q9ULM3 1422 aa19.44■□□□□ 0.7
MKS1-206ENST00000577824 SPAG9O60271 1321 aaKnown RBP19.44■□□□□ 0.7
MKS1-206ENST00000577824 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
MKS1-206ENST00000577824 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
MKS1-206ENST00000577824 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
MKS1-206ENST00000577824 TSPY4P0CV99 314 aa19.39■□□□□ 0.69
MKS1-206ENST00000577824 TSPY10P0CW01 314 aa19.39■□□□□ 0.69
MKS1-206ENST00000577824 ATP10AO60312 1499 aa19.39■□□□□ 0.69
MKS1-206ENST00000577824 BCORL1Q5H9F3 1711 aa19.37■□□□□ 0.69
MKS1-206ENST00000577824 NCOA1Q15788 1441 aa19.37■□□□□ 0.69
MKS1-206ENST00000577824 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
MKS1-206ENST00000577824 AGLP35573 1532 aa19.36■□□□□ 0.69
MKS1-206ENST00000577824 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
MKS1-206ENST00000577824 A2MP01023 1474 aa19.35■□□□□ 0.69
MKS1-206ENST00000577824 EIF2AK4Q9P2K8 1649 aaKnown RBP19.35■□□□□ 0.69
MKS1-206ENST00000577824 ANKRD30AQ9BXX3 1397 aa19.34■□□□□ 0.69
MKS1-206ENST00000577824 ERBINQ96RT1 1412 aa19.33■□□□□ 0.68
MKS1-206ENST00000577824 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
MKS1-206ENST00000577824 GCC2Q8IWJ2 1684 aa19.32■□□□□ 0.68
MKS1-206ENST00000577824 DHX29Q7Z478 1369 aaKnown RBP19.32■□□□□ 0.68
MKS1-206ENST00000577824 HFM1A2PYH4 1435 aa19.3■□□□□ 0.68
MKS1-206ENST00000577824 RNF17Q9BXT8 1623 aaKnown RBP19.28■□□□□ 0.68
MKS1-206ENST00000577824 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
MKS1-206ENST00000577824 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
MKS1-206ENST00000577824 NAIPQ13075 1403 aa19.25■□□□□ 0.67
MKS1-206ENST00000577824 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
MKS1-206ENST00000577824 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
MKS1-206ENST00000577824 MROH1Q8NDA8 1641 aa19.24■□□□□ 0.67
MKS1-206ENST00000577824 PRDM15P57071 1507 aaPredicted RBP19.24■□□□□ 0.67
MKS1-206ENST00000577824 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
MKS1-206ENST00000577824 ITGAEP38570 1179 aa19.23■□□□□ 0.67
MKS1-206ENST00000577824 RRP7BPQ9NSQ0 103 aa19.22■□□□□ 0.67
MKS1-206ENST00000577824 UNC13BO14795 1591 aa19.21■□□□□ 0.67
MKS1-206ENST00000577824 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms