RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
TOP2A-202ENST00000577541 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
TOP2A-202ENST00000577541 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
TOP2A-202ENST00000577541 POTEEQ6S8J3 1075 aa10.83□□□□□ -0.68
TOP2A-202ENST00000577541 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
TOP2A-202ENST00000577541 HCSTQ9UBK5 93 aa10.81□□□□□ -0.68
TOP2A-202ENST00000577541 PBX2P40425 430 aa10.78□□□□□ -0.68
TOP2A-202ENST00000577541 SOX12O15370 315 aa10.77□□□□□ -0.69
TOP2A-202ENST00000577541 PHF8Q9UPP1 1060 aa10.75□□□□□ -0.69
TOP2A-202ENST00000577541 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
TOP2A-202ENST00000577541 NUDT7P0C024 238 aa10.69□□□□□ -0.7
TOP2A-202ENST00000577541 TRIM41Q8WV44 630 aa10.69□□□□□ -0.7
TOP2A-202ENST00000577541 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
TOP2A-202ENST00000577541 LHX6Q9UPM6 363 aa10.67□□□□□ -0.7
TOP2A-202ENST00000577541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
TOP2A-202ENST00000577541 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
TOP2A-202ENST00000577541 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
TOP2A-202ENST00000577541 KIF3CO14782 793 aa10.63□□□□□ -0.71
TOP2A-202ENST00000577541 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
TOP2A-202ENST00000577541 FBXO22Q8NEZ5 403 aa10.6□□□□□ -0.71
TOP2A-202ENST00000577541 C2orf72A6NCS6 295 aa10.59□□□□□ -0.71
TOP2A-202ENST00000577541 RIOK3O14730 519 aaKnown RBP10.58□□□□□ -0.72
TOP2A-202ENST00000577541 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
TOP2A-202ENST00000577541 NLRP6P59044 892 aa10.57□□□□□ -0.72
TOP2A-202ENST00000577541 SLC34A2O95436 690 aa10.56□□□□□ -0.72
TOP2A-202ENST00000577541 TK2O00142 265 aa10.55□□□□□ -0.72
TOP2A-202ENST00000577541 VGFO15240 615 aaPredicted RBP10.55□□□□□ -0.72
TOP2A-202ENST00000577541 HRO43593 1189 aa10.55□□□□□ -0.72
TOP2A-202ENST00000577541 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
TOP2A-202ENST00000577541 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
TOP2A-202ENST00000577541 RGS20O76081 388 aa10.53□□□□□ -0.72
TOP2A-202ENST00000577541 KCTD12Q96CX2 325 aaKnown RBP10.52□□□□□ -0.73
TOP2A-202ENST00000577541 IRX2Q9BZI1 471 aaPredicted RBP10.51□□□□□ -0.73
TOP2A-202ENST00000577541 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
TOP2A-202ENST00000577541 PSEN2P49810 448 aa10.5□□□□□ -0.73
TOP2A-202ENST00000577541 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
TOP2A-202ENST00000577541 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
TOP2A-202ENST00000577541 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
TOP2A-202ENST00000577541 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
TOP2A-202ENST00000577541 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
TOP2A-202ENST00000577541 PTPN5P54829 565 aa10.42□□□□□ -0.74
TOP2A-202ENST00000577541 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
TOP2A-202ENST00000577541 STK24Q9Y6E0 443 aa10.37□□□□□ -0.75
TOP2A-202ENST00000577541 A0A0G2JS52 829 aa10.36□□□□□ -0.75
TOP2A-202ENST00000577541 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
TOP2A-202ENST00000577541 PTCD2Q8WV60 388 aaKnown RBP10.35□□□□□ -0.75
TOP2A-202ENST00000577541 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
TOP2A-202ENST00000577541 PPP1R37O75864 691 aa10.32□□□□□ -0.76
TOP2A-202ENST00000577541 KCNK17Q96T54 332 aa10.32□□□□□ -0.76
TOP2A-202ENST00000577541 VPS9D1Q9Y2B5 631 aa10.32□□□□□ -0.76
TOP2A-202ENST00000577541 THSD4Q6ZMP0 1018 aa10.28□□□□□ -0.76
TOP2A-202ENST00000577541 STK25O00506 426 aa10.26□□□□□ -0.77
TOP2A-202ENST00000577541 Q6ZNB5 142 aa10.26□□□□□ -0.77
TOP2A-202ENST00000577541 TBC1D12O60347 775 aa10.25□□□□□ -0.77
TOP2A-202ENST00000577541 GOLGA8CPA6NN73 597 aa10.23□□□□□ -0.77
TOP2A-202ENST00000577541 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
TOP2A-202ENST00000577541 SLC4A5Q9BY07 1137 aa10.23□□□□□ -0.77
TOP2A-202ENST00000577541 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
TOP2A-202ENST00000577541 WNT2BQ93097 391 aa10.22□□□□□ -0.77
TOP2A-202ENST00000577541 FOXK1P85037 733 aa10.21□□□□□ -0.77
TOP2A-202ENST00000577541 DSG2Q14126 1118 aa10.18□□□□□ -0.78
TOP2A-202ENST00000577541 MRPL50Q8N5N7 158 aaKnown RBP10.17□□□□□ -0.78
TOP2A-202ENST00000577541 LCE2BO14633 110 aa10.16□□□□□ -0.78
TOP2A-202ENST00000577541 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
TOP2A-202ENST00000577541 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
TOP2A-202ENST00000577541 GPHNQ9NQX3 736 aaPredicted RBP10.15□□□□□ -0.78
TOP2A-202ENST00000577541 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
TOP2A-202ENST00000577541 ITGBL1O95965 494 aaPredicted RBP10.12□□□□□ -0.79
TOP2A-202ENST00000577541 PTPREP23469 700 aa10.11□□□□□ -0.79
TOP2A-202ENST00000577541 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
TOP2A-202ENST00000577541 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
TOP2A-202ENST00000577541 LAPTM4AQ15012 233 aa10.08□□□□□ -0.8
TOP2A-202ENST00000577541 RGL2O15211 777 aa10.07□□□□□ -0.8
TOP2A-202ENST00000577541 FOSBP53539 338 aa10.06□□□□□ -0.8
TOP2A-202ENST00000577541 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.86e-17■□□□□ 11.2
TOP2A-202ENST00000577541 TRAF7Q6Q0C0 670 aa10.04□□□□□ -0.8
TOP2A-202ENST00000577541 ECM2O94769 699 aaPredicted RBP10.03□□□□□ -0.8
TOP2A-202ENST00000577541 ANKK1Q8NFD2 765 aa10.02□□□□□ -0.81
TOP2A-202ENST00000577541 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
TOP2A-202ENST00000577541 GFRA3O60609 400 aa9.99□□□□□ -0.81
TOP2A-202ENST00000577541 KCNC4Q03721 635 aa9.99□□□□□ -0.81
TOP2A-202ENST00000577541 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
TOP2A-202ENST00000577541 BCAMP50895 628 aa9.98□□□□□ -0.81
TOP2A-202ENST00000577541 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
TOP2A-202ENST00000577541 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
TOP2A-202ENST00000577541 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
TOP2A-202ENST00000577541 PKD2Q13563 968 aa9.97□□□□□ -0.81
TOP2A-202ENST00000577541 RABGEF1Q9UJ41 708 aa9.96□□□□□ -0.82
TOP2A-202ENST00000577541 SOWAHBA6NEL2 793 aa9.95□□□□□ -0.82
TOP2A-202ENST00000577541 PROX2Q3B8N5 592 aa9.95□□□□□ -0.82
TOP2A-202ENST00000577541 LAPTM4BQ86VI4 370 aa9.92□□□□□ -0.82
TOP2A-202ENST00000577541 PPP1R3GB7ZBB8 358 aa9.91□□□□□ -0.82
TOP2A-202ENST00000577541 COL9A1P20849 921 aa9.91□□□□□ -0.82
TOP2A-202ENST00000577541 CRISPLD2Q9H0B8 497 aa9.91□□□□□ -0.82
TOP2A-202ENST00000577541 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
TOP2A-202ENST00000577541 EVI5O60447 810 aa9.9□□□□□ -0.82
TOP2A-202ENST00000577541 NRG2O14511 850 aaPredicted RBP9.88□□□□□ -0.83
TOP2A-202ENST00000577541 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
TOP2A-202ENST00000577541 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
TOP2A-202ENST00000577541 ZNF787Q6DD87 383 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms