RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 PTGER2P43116 358 aa11.72□□□□□ -0.53
TRAPPC8-203ENST00000577474 ANKRD13DQ6ZTN6 518 aa11.7□□□□□ -0.54
TRAPPC8-203ENST00000577474 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
TRAPPC8-203ENST00000577474 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAPPC8-203ENST00000577474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-203ENST00000577474 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-203ENST00000577474 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-203ENST00000577474 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
TRAPPC8-203ENST00000577474 RNF25Q96BH1 459 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-203ENST00000577474 LSM11P83369 360 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRAPPC8-203ENST00000577474 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC8-203ENST00000577474 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
TRAPPC8-203ENST00000577474 NLRP6P59044 892 aa11.54□□□□□ -0.56
TRAPPC8-203ENST00000577474 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
TRAPPC8-203ENST00000577474 KIF3CO14782 793 aa11.52□□□□□ -0.57
TRAPPC8-203ENST00000577474 NUDT7P0C024 238 aa11.52□□□□□ -0.57
TRAPPC8-203ENST00000577474 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC8-203ENST00000577474 PBX2P40425 430 aa11.51□□□□□ -0.57
TRAPPC8-203ENST00000577474 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
TRAPPC8-203ENST00000577474 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
TRAPPC8-203ENST00000577474 PLA2G2EQ9NZK7 142 aa11.49□□□□□ -0.57
TRAPPC8-203ENST00000577474 LHX6Q9UPM6 363 aa11.49□□□□□ -0.57
TRAPPC8-203ENST00000577474 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC8-203ENST00000577474 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
TRAPPC8-203ENST00000577474 HCSTQ9UBK5 93 aa11.45□□□□□ -0.58
TRAPPC8-203ENST00000577474 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
TRAPPC8-203ENST00000577474 SLC34A2O95436 690 aa11.44□□□□□ -0.58
TRAPPC8-203ENST00000577474 STK24Q9Y6E0 443 aa11.42□□□□□ -0.58
TRAPPC8-203ENST00000577474 ADGRD1Q6QNK2 874 aa11.39□□□□□ -0.59
TRAPPC8-203ENST00000577474 SLC24A1O60721 1099 aa11.38□□□□□ -0.59
TRAPPC8-203ENST00000577474 ARHGAP33O14559 1287 aa11.37□□□□□ -0.59
TRAPPC8-203ENST00000577474 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
TRAPPC8-203ENST00000577474 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
TRAPPC8-203ENST00000577474 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
TRAPPC8-203ENST00000577474 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
TRAPPC8-203ENST00000577474 STK25O00506 426 aa11.32□□□□□ -0.6
TRAPPC8-203ENST00000577474 HRO43593 1189 aa11.31□□□□□ -0.6
TRAPPC8-203ENST00000577474 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC8-203ENST00000577474 TK2O00142 265 aa11.3□□□□□ -0.6
TRAPPC8-203ENST00000577474 DMRTA1Q5VZB9 504 aa11.3□□□□□ -0.6
TRAPPC8-203ENST00000577474 PSEN2P49810 448 aa11.28□□□□□ -0.6
TRAPPC8-203ENST00000577474 PTCD2Q8WV60 388 aaKnown RBP11.25□□□□□ -0.61
TRAPPC8-203ENST00000577474 PPP1R37O75864 691 aa11.24□□□□□ -0.61
TRAPPC8-203ENST00000577474 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-203ENST00000577474 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC8-203ENST00000577474 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
TRAPPC8-203ENST00000577474 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
TRAPPC8-203ENST00000577474 FOXK1P85037 733 aa11.16□□□□□ -0.62
TRAPPC8-203ENST00000577474 PLPP6Q8IY26 295 aa11.15□□□□□ -0.62
TRAPPC8-203ENST00000577474 RGL2O15211 777 aa11.13□□□□□ -0.63
TRAPPC8-203ENST00000577474 PTPN5P54829 565 aa11.12□□□□□ -0.63
TRAPPC8-203ENST00000577474 KCNK17Q96T54 332 aa11.12□□□□□ -0.63
TRAPPC8-203ENST00000577474 VPS9D1Q9Y2B5 631 aa11.12□□□□□ -0.63
TRAPPC8-203ENST00000577474 GPHNQ9NQX3 736 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC8-203ENST00000577474 TBC1D12O60347 775 aa11.1□□□□□ -0.63
TRAPPC8-203ENST00000577474 DSG2Q14126 1118 aa11.09□□□□□ -0.63
TRAPPC8-203ENST00000577474 RGS20O76081 388 aa11.08□□□□□ -0.64
TRAPPC8-203ENST00000577474 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
TRAPPC8-203ENST00000577474 PKD2Q13563 968 aa11.07□□□□□ -0.64
TRAPPC8-203ENST00000577474 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
TRAPPC8-203ENST00000577474 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
TRAPPC8-203ENST00000577474 IRX2Q9BZI1 471 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC8-203ENST00000577474 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC8-203ENST00000577474 THSD4Q6ZMP0 1018 aa11.02□□□□□ -0.65
TRAPPC8-203ENST00000577474 A0A0G2JS52 829 aa11□□□□□ -0.65
TRAPPC8-203ENST00000577474 ZNF454Q8N9F8 522 aa11□□□□□ -0.65
TRAPPC8-203ENST00000577474 OXER1Q8TDS5 423 aa11□□□□□ -0.65
TRAPPC8-203ENST00000577474 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
TRAPPC8-203ENST00000577474 UPF1Q92900 1129 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRAPPC8-203ENST00000577474 WNT2BQ93097 391 aa10.96□□□□□ -0.65
TRAPPC8-203ENST00000577474 ZBED2Q9BTP6 218 aa10.95□□□□□ -0.66
TRAPPC8-203ENST00000577474 GOLGA8CPA6NN73 597 aa10.94□□□□□ -0.66
TRAPPC8-203ENST00000577474 PTPREP23469 700 aa10.94□□□□□ -0.66
TRAPPC8-203ENST00000577474 FOSBP53539 338 aa10.94□□□□□ -0.66
TRAPPC8-203ENST00000577474 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
TRAPPC8-203ENST00000577474 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC8-203ENST00000577474 HS6ST3Q8IZP7 471 aa10.88□□□□□ -0.67
TRAPPC8-203ENST00000577474 CRISPLD2Q9H0B8 497 aa10.87□□□□□ -0.67
TRAPPC8-203ENST00000577474 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
TRAPPC8-203ENST00000577474 ADAM33Q9BZ11 813 aa10.86□□□□□ -0.67
TRAPPC8-203ENST00000577474 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
TRAPPC8-203ENST00000577474 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
TRAPPC8-203ENST00000577474 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
TRAPPC8-203ENST00000577474 EVI5O60447 810 aa10.82□□□□□ -0.68
TRAPPC8-203ENST00000577474 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC8-203ENST00000577474 NKX1-1Q15270 411 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC8-203ENST00000577474 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
TRAPPC8-203ENST00000577474 Q6ZNB5 142 aa10.78□□□□□ -0.68
TRAPPC8-203ENST00000577474 RABGEF1Q9UJ41 708 aa10.77□□□□□ -0.69
TRAPPC8-203ENST00000577474 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
TRAPPC8-203ENST00000577474 ANKK1Q8NFD2 765 aa10.76□□□□□ -0.69
TRAPPC8-203ENST00000577474 PDE4AP27815 886 aa10.75□□□□□ -0.69
TRAPPC8-203ENST00000577474 BCAMP50895 628 aa10.75□□□□□ -0.69
TRAPPC8-203ENST00000577474 PROX2Q3B8N5 592 aa10.75□□□□□ -0.69
TRAPPC8-203ENST00000577474 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
TRAPPC8-203ENST00000577474 DNAJC5Q9H3Z4 198 aa10.74□□□□□ -0.69
TRAPPC8-203ENST00000577474 COL9A1P20849 921 aa10.73□□□□□ -0.69
TRAPPC8-203ENST00000577474 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
TRAPPC8-203ENST00000577474 PCDHGA10Q9Y5H3 936 aa10.72□□□□□ -0.69
TRAPPC8-203ENST00000577474 MAP3K9P80192 1104 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms