RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 CCNB3Q8WWL7 1395 aa31.3■■■□□ 2.6
SUPT4H1-202ENST00000577396 CDC42BPBQ9Y5S2 1711 aa31.29■■■□□ 2.6
SUPT4H1-202ENST00000577396 CDC42BPAQ5VT25 1732 aa31.29■■■□□ 2.6
SUPT4H1-202ENST00000577396 SUPT6HQ7KZ85 1726 aaKnown RBP31.29■■■□□ 2.6
SUPT4H1-202ENST00000577396 PREX2Q70Z35 1606 aa31.27■■■□□ 2.6
SUPT4H1-202ENST00000577396 ARHGAP5Q13017 1502 aa31.26■■■□□ 2.6
SUPT4H1-202ENST00000577396 CFAP74Q9C0B2 1584 aa31.24■■■□□ 2.59
SUPT4H1-202ENST00000577396 CFDP1Q9UEE9 299 aaPredicted RBP31.23■■■□□ 2.59
SUPT4H1-202ENST00000577396 RAPGEF3O95398 923 aa31.2■■■□□ 2.58
SUPT4H1-202ENST00000577396 ADGRL1O94910 1474 aa31.18■■■□□ 2.58
SUPT4H1-202ENST00000577396 SCAPERQ9BY12 1400 aa31.18■■■□□ 2.58
SUPT4H1-202ENST00000577396 DENND4BO75064 1496 aaPredicted RBP31.16■■■□□ 2.58
SUPT4H1-202ENST00000577396 ZNF777Q9ULD5 760 aaPredicted RBP31.15■■■□□ 2.58
SUPT4H1-202ENST00000577396 ITSN2Q9NZM3 1697 aa31.12■■■□□ 2.57
SUPT4H1-202ENST00000577396 ZNF644Q9H582 1327 aaPredicted RBP31.11■■■□□ 2.57
SUPT4H1-202ENST00000577396 ARHGEF12Q9NZN5 1544 aa31.11■■■□□ 2.57
SUPT4H1-202ENST00000577396 SAMD9LQ8IVG5 1584 aa31.1■■■□□ 2.57
SUPT4H1-202ENST00000577396 MYOM3Q5VTT5 1437 aa31.09■■■□□ 2.57
SUPT4H1-202ENST00000577396 FRMPD1Q5SYB0 1578 aa31.09■■■□□ 2.57
SUPT4H1-202ENST00000577396 ABCC1P33527 1531 aa31.08■■■□□ 2.57
SUPT4H1-202ENST00000577396 PPARGC1BQ86YN6 1023 aaKnown RBP31.08■■■□□ 2.57
SUPT4H1-202ENST00000577396 KIAA1107Q9UPP5 1409 aa31.07■■■□□ 2.56
SUPT4H1-202ENST00000577396 RICTORQ6R327 1708 aa31.07■■■□□ 2.56
SUPT4H1-202ENST00000577396 POGZQ7Z3K3 1410 aa31.06■■■□□ 2.56
SUPT4H1-202ENST00000577396 AFAP1Q8N556 730 aa31.06■■■□□ 2.56
SUPT4H1-202ENST00000577396 HNRNPMP52272 730 aaKnown RBP eCLIP31.05■■■□□ 2.56
SUPT4H1-202ENST00000577396 MIA2Q96PC5 1412 aa31.04■■■□□ 2.56
SUPT4H1-202ENST00000577396 TRAPPC8Q9Y2L5 1435 aa31.04■■■□□ 2.56
SUPT4H1-202ENST00000577396 PLEKHH2Q8IVE3 1493 aa31.03■■■□□ 2.56
SUPT4H1-202ENST00000577396 ZNF518AQ6AHZ1 1483 aa31■■■□□ 2.55
SUPT4H1-202ENST00000577396 SYCP2Q9BX26 1530 aa30.99■■■□□ 2.55
SUPT4H1-202ENST00000577396 MBD5Q9P267 1494 aa30.99■■■□□ 2.55
SUPT4H1-202ENST00000577396 CAMSAP2Q08AD1 1489 aa30.97■■■□□ 2.55
SUPT4H1-202ENST00000577396 ZMYM4Q5VZL5 1548 aa30.97■■■□□ 2.55
SUPT4H1-202ENST00000577396 KDM5CP41229 1560 aa30.95■■■□□ 2.55
SUPT4H1-202ENST00000577396 FGD6Q6ZV73 1430 aa30.95■■■□□ 2.54
SUPT4H1-202ENST00000577396 MAGI2Q86UL8 1455 aa30.93■■■□□ 2.54
SUPT4H1-202ENST00000577396 RSPH4AQ5TD94 716 aa30.91■■■□□ 2.54
SUPT4H1-202ENST00000577396 MLH3Q9UHC1 1453 aa30.89■■■□□ 2.54
SUPT4H1-202ENST00000577396 YEATS2Q9ULM3 1422 aa30.88■■■□□ 2.53
SUPT4H1-202ENST00000577396 TCOF1Q13428 1488 aaKnown RBP30.87■■■□□ 2.53
SUPT4H1-202ENST00000577396 PTPN23Q9H3S7 1636 aa30.86■■■□□ 2.53
SUPT4H1-202ENST00000577396 SPAG9O60271 1321 aaKnown RBP30.84■■■□□ 2.53
SUPT4H1-202ENST00000577396 ZFYVE16Q7Z3T8 1539 aa30.84■■■□□ 2.53
SUPT4H1-202ENST00000577396 ARHGEF5Q12774 1597 aa30.83■■■□□ 2.53
SUPT4H1-202ENST00000577396 CCDC141Q6ZP82 1450 aa30.82■■■□□ 2.52
SUPT4H1-202ENST00000577396 HECW2Q9P2P5 1572 aa30.81■■■□□ 2.52
SUPT4H1-202ENST00000577396 ARHGEF40Q8TER5 1519 aa30.81■■■□□ 2.52
SUPT4H1-202ENST00000577396 MYT1LQ9UL68 1186 aa30.8■■■□□ 2.52
SUPT4H1-202ENST00000577396 KIDINS220Q9ULH0 1771 aa30.79■■■□□ 2.52
SUPT4H1-202ENST00000577396 ATP10AO60312 1499 aa30.76■■■□□ 2.52
SUPT4H1-202ENST00000577396 RTEL1-TNFRSF6BF6WH68 1400 aa30.76■■■□□ 2.52
SUPT4H1-202ENST00000577396 TSPY4P0CV99 314 aa30.76■■■□□ 2.51
SUPT4H1-202ENST00000577396 TSPY10P0CW01 314 aa30.76■■■□□ 2.51
SUPT4H1-202ENST00000577396 ABCC5O15440 1437 aa30.74■■■□□ 2.51
SUPT4H1-202ENST00000577396 FAM50AQ14320 339 aaKnown RBP30.74■■■□□ 2.51
SUPT4H1-202ENST00000577396 INO80Q9ULG1 1556 aaPredicted RBP30.74■■■□□ 2.51
SUPT4H1-202ENST00000577396 ATP7AQ04656 1500 aa30.73■■■□□ 2.51
SUPT4H1-202ENST00000577396 DIP2CQ9Y2E4 1556 aa30.72■■■□□ 2.51
SUPT4H1-202ENST00000577396 ABCA6Q8N139 1617 aa30.71■■■□□ 2.51
SUPT4H1-202ENST00000577396 DAPK1P53355 1430 aa30.69■■■□□ 2.5
SUPT4H1-202ENST00000577396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.69■■■□□ 2.5
SUPT4H1-202ENST00000577396 C9orf84Q5VXU9 1444 aa30.69■■■□□ 2.5
SUPT4H1-202ENST00000577396 RRBP1Q9P2E9 1410 aaKnown RBP30.69■■■□□ 2.5
SUPT4H1-202ENST00000577396 DNMT1P26358 1616 aaKnown RBP30.67■■■□□ 2.5
SUPT4H1-202ENST00000577396 MAST1Q9Y2H9 1570 aa30.66■■■□□ 2.5
SUPT4H1-202ENST00000577396 SIGLEC1Q9BZZ2 1709 aa30.66■■■□□ 2.5
SUPT4H1-202ENST00000577396 REREQ9P2R6 1566 aa30.64■■■□□ 2.5
SUPT4H1-202ENST00000577396 ARID4BQ4LE39 1312 aaPredicted RBP30.62■■■□□ 2.49
SUPT4H1-202ENST00000577396 SHANK2Q9UPX8 1470 aa30.62■■■□□ 2.49
SUPT4H1-202ENST00000577396 KDM4FA0A1W2PPD8 638 aa30.62■■■□□ 2.49
SUPT4H1-202ENST00000577396 A2MP01023 1474 aa30.59■■■□□ 2.49
SUPT4H1-202ENST00000577396 PTPRKQ15262 1439 aa30.59■■■□□ 2.49
SUPT4H1-202ENST00000577396 CROCC2H7BZ55 1655 aa30.58■■■□□ 2.49
SUPT4H1-202ENST00000577396 DHX29Q7Z478 1369 aaKnown RBP30.57■■■□□ 2.48
SUPT4H1-202ENST00000577396 CHIC2Q9UKJ5 165 aa30.57■■■□□ 2.48
SUPT4H1-202ENST00000577396 AGLP35573 1532 aa30.56■■■□□ 2.48
SUPT4H1-202ENST00000577396 ADGBQ8N7X0 1667 aa30.54■■■□□ 2.48
SUPT4H1-202ENST00000577396 PLXNC1O60486 1568 aa30.54■■■□□ 2.48
SUPT4H1-202ENST00000577396 NCOA1Q15788 1441 aa30.52■■■□□ 2.48
SUPT4H1-202ENST00000577396 RRP7BPQ9NSQ0 103 aa30.51■■■□□ 2.47
SUPT4H1-202ENST00000577396 BCORL1Q5H9F3 1711 aa30.5■■■□□ 2.47
SUPT4H1-202ENST00000577396 ADGRL2O95490 1459 aa30.49■■■□□ 2.47
SUPT4H1-202ENST00000577396 ANKRD30AQ9BXX3 1397 aa30.49■■■□□ 2.47
SUPT4H1-202ENST00000577396 ITGAEP38570 1179 aa30.49■■■□□ 2.47
SUPT4H1-202ENST00000577396 MLECQ14165 292 aa30.49■■■□□ 2.47
SUPT4H1-202ENST00000577396 KIF15Q9NS87 1388 aa30.48■■■□□ 2.47
SUPT4H1-202ENST00000577396 ADAMTSL3P82987 1691 aa30.47■■■□□ 2.47
SUPT4H1-202ENST00000577396 DUOX2Q9NRD8 1548 aa30.43■■■□□ 2.46
SUPT4H1-202ENST00000577396 ROCK1Q13464 1354 aa30.43■■■□□ 2.46
SUPT4H1-202ENST00000577396 KIF3BO15066 747 aa30.42■■■□□ 2.46
SUPT4H1-202ENST00000577396 GGT6Q6P531 493 aa30.38■■■□□ 2.45
SUPT4H1-202ENST00000577396 ERBINQ96RT1 1412 aa30.36■■■□□ 2.45
SUPT4H1-202ENST00000577396 MADDQ8WXG6 1647 aa30.35■■■□□ 2.45
SUPT4H1-202ENST00000577396 PPP6R1Q9UPN7 881 aa30.33■■■□□ 2.45
SUPT4H1-202ENST00000577396 EIF2AK4Q9P2K8 1649 aaKnown RBP30.31■■■□□ 2.44
SUPT4H1-202ENST00000577396 ANKRD50Q9ULJ7 1429 aa30.3■■■□□ 2.44
SUPT4H1-202ENST00000577396 PTPRMP28827 1452 aa30.28■■■□□ 2.44
SUPT4H1-202ENST00000577396 FER1L4A9Z1Z3 1794 aa30.27■■■□□ 2.44
SUPT4H1-202ENST00000577396 RNF17Q9BXT8 1623 aaKnown RBP30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms