RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 KDM4FA0A1W2PPD8 638 aa37.13■■■■□ 3.53
SNF8-217ENST00000576353 EHBP1L1Q8N3D4 1523 aa37.13■■■■□ 3.53
SNF8-217ENST00000576353 PREX2Q70Z35 1606 aa37.11■■■■□ 3.53
SNF8-217ENST00000576353 CCNB3Q8WWL7 1395 aa37.11■■■■□ 3.53
SNF8-217ENST00000576353 POGZQ7Z3K3 1410 aa37.1■■■■□ 3.53
SNF8-217ENST00000576353 RICTORQ6R327 1708 aa37.1■■■■□ 3.53
SNF8-217ENST00000576353 GPATCH8Q9UKJ3 1502 aaKnown RBP37.1■■■■□ 3.53
SNF8-217ENST00000576353 CDC42BPBQ9Y5S2 1711 aa37.08■■■■□ 3.53
SNF8-217ENST00000576353 TIAM1Q13009 1591 aa37.07■■■■□ 3.52
SNF8-217ENST00000576353 CFDP1Q9UEE9 299 aaPredicted RBP37.05■■■■□ 3.52
SNF8-217ENST00000576353 ZMYM4Q5VZL5 1548 aa37.05■■■■□ 3.52
SNF8-217ENST00000576353 MAGI2Q86UL8 1455 aa37.04■■■■□ 3.52
SNF8-217ENST00000576353 CDC42BPAQ5VT25 1732 aa37.04■■■■□ 3.52
SNF8-217ENST00000576353 ZNF777Q9ULD5 760 aaPredicted RBP37.03■■■■□ 3.52
SNF8-217ENST00000576353 MAP3K1Q13233 1512 aa37.02■■■■□ 3.52
SNF8-217ENST00000576353 ZNF518AQ6AHZ1 1483 aa37.01■■■■□ 3.52
SNF8-217ENST00000576353 APLP2Q06481 763 aa37■■■■□ 3.51
SNF8-217ENST00000576353 AFAP1Q8N556 730 aa37■■■■□ 3.51
SNF8-217ENST00000576353 LRRC9Q6ZRR7 1453 aa36.97■■■■□ 3.51
SNF8-217ENST00000576353 ZFYVE16Q7Z3T8 1539 aa36.95■■■■□ 3.51
SNF8-217ENST00000576353 ARHGEF40Q8TER5 1519 aa36.95■■■■□ 3.51
SNF8-217ENST00000576353 ABCC1P33527 1531 aa36.95■■■■□ 3.5
SNF8-217ENST00000576353 NCOA2Q15596 1464 aa36.94■■■■□ 3.5
SNF8-217ENST00000576353 YEATS2Q9ULM3 1422 aa36.93■■■■□ 3.5
SNF8-217ENST00000576353 ARID4BQ4LE39 1312 aaPredicted RBP36.92■■■■□ 3.5
SNF8-217ENST00000576353 ARHGEF12Q9NZN5 1544 aa36.92■■■■□ 3.5
SNF8-217ENST00000576353 SUPT6HQ7KZ85 1726 aaKnown RBP36.91■■■■□ 3.5
SNF8-217ENST00000576353 PLEKHH2Q8IVE3 1493 aa36.9■■■■□ 3.5
SNF8-217ENST00000576353 KANK4Q5T7N3 995 aaPredicted RBP36.9■■■■□ 3.5
SNF8-217ENST00000576353 MYT1LQ9UL68 1186 aa36.9■■■■□ 3.5
SNF8-217ENST00000576353 TRAPPC8Q9Y2L5 1435 aa36.9■■■■□ 3.5
SNF8-217ENST00000576353 KDM5CP41229 1560 aa36.88■■■■□ 3.49
SNF8-217ENST00000576353 KIAA1107Q9UPP5 1409 aa36.88■■■■□ 3.49
SNF8-217ENST00000576353 SAMD9LQ8IVG5 1584 aa36.87■■■■□ 3.49
SNF8-217ENST00000576353 HNRNPMP52272 730 aaKnown RBP eCLIP36.86■■■■□ 3.49
SNF8-217ENST00000576353 ITSN2Q9NZM3 1697 aa36.83■■■■□ 3.49
SNF8-217ENST00000576353 ATP10AO60312 1499 aa36.82■■■■□ 3.49
SNF8-217ENST00000576353 MLH3Q9UHC1 1453 aa36.82■■■■□ 3.49
SNF8-217ENST00000576353 SYCP2Q9BX26 1530 aa36.8■■■■□ 3.48
SNF8-217ENST00000576353 ZNF644Q9H582 1327 aaPredicted RBP36.8■■■■□ 3.48
SNF8-217ENST00000576353 HECW2Q9P2P5 1572 aa36.78■■■■□ 3.48
SNF8-217ENST00000576353 C9orf84Q5VXU9 1444 aa36.76■■■■□ 3.48
SNF8-217ENST00000576353 SPAG9O60271 1321 aaKnown RBP36.75■■■■□ 3.47
SNF8-217ENST00000576353 MBD5Q9P267 1494 aa36.68■■■■□ 3.46
SNF8-217ENST00000576353 RSPH4AQ5TD94 716 aa36.67■■■■□ 3.46
SNF8-217ENST00000576353 BCORL1Q5H9F3 1711 aa36.67■■■■□ 3.46
SNF8-217ENST00000576353 ADAMTSL3P82987 1691 aa36.66■■■■□ 3.46
SNF8-217ENST00000576353 DIP2CQ9Y2E4 1556 aa36.66■■■■□ 3.46
SNF8-217ENST00000576353 CAMSAP2Q08AD1 1489 aa36.64■■■■□ 3.46
SNF8-217ENST00000576353 MYOM3Q5VTT5 1437 aa36.64■■■■□ 3.46
SNF8-217ENST00000576353 MLECQ14165 292 aa36.63■■■■□ 3.45
SNF8-217ENST00000576353 MIA2Q96PC5 1412 aa36.62■■■■□ 3.45
SNF8-217ENST00000576353 KIDINS220Q9ULH0 1771 aa36.61■■■■□ 3.45
SNF8-217ENST00000576353 ABCA6Q8N139 1617 aa36.61■■■■□ 3.45
SNF8-217ENST00000576353 REREQ9P2R6 1566 aa36.6■■■■□ 3.45
SNF8-217ENST00000576353 SIGLEC1Q9BZZ2 1709 aa36.59■■■■□ 3.45
SNF8-217ENST00000576353 ATP7AQ04656 1500 aa36.57■■■■□ 3.44
SNF8-217ENST00000576353 PTPRMP28827 1452 aa36.55■■■■□ 3.44
SNF8-217ENST00000576353 CCDC141Q6ZP82 1450 aa36.55■■■■□ 3.44
SNF8-217ENST00000576353 RTEL1-TNFRSF6BF6WH68 1400 aa36.53■■■■□ 3.44
SNF8-217ENST00000576353 MADDQ8WXG6 1647 aa36.53■■■■□ 3.44
SNF8-217ENST00000576353 AGLP35573 1532 aa36.52■■■■□ 3.44
SNF8-217ENST00000576353 INO80Q9ULG1 1556 aaPredicted RBP36.52■■■■□ 3.44
SNF8-217ENST00000576353 TSPY4P0CV99 314 aa36.51■■■■□ 3.44
SNF8-217ENST00000576353 TSPY10P0CW01 314 aa36.51■■■■□ 3.44
SNF8-217ENST00000576353 ARHGEF5Q12774 1597 aa36.48■■■■□ 3.43
SNF8-217ENST00000576353 A2MP01023 1474 aa36.44■■■■□ 3.42
SNF8-217ENST00000576353 FGD6Q6ZV73 1430 aa36.41■■■■□ 3.42
SNF8-217ENST00000576353 RIMS1Q86UR5 1692 aaKnown RBP36.4■■■■□ 3.42
SNF8-217ENST00000576353 ESF1Q9H501 851 aaKnown RBP36.38■■■■□ 3.41
SNF8-217ENST00000576353 DHX29Q7Z478 1369 aaKnown RBP36.36■■■■□ 3.41
SNF8-217ENST00000576353 FER1L4A9Z1Z3 1794 aa36.35■■■■□ 3.41
SNF8-217ENST00000576353 PTPN23Q9H3S7 1636 aa36.34■■■■□ 3.41
SNF8-217ENST00000576353 PLXNC1O60486 1568 aa36.34■■■■□ 3.41
SNF8-217ENST00000576353 ADGBQ8N7X0 1667 aa36.34■■■■□ 3.41
SNF8-217ENST00000576353 PLPPR3Q6T4P5 718 aa36.33■■■■□ 3.41
SNF8-217ENST00000576353 TCOF1Q13428 1488 aaKnown RBP36.31■■■■□ 3.4
SNF8-217ENST00000576353 MAST1Q9Y2H9 1570 aa36.27■■■■□ 3.4
SNF8-217ENST00000576353 GGT6Q6P531 493 aa36.26■■■■□ 3.4
SNF8-217ENST00000576353 CNTLNQ9NXG0 1405 aa36.25■■■■□ 3.39
SNF8-217ENST00000576353 PPP6R1Q9UPN7 881 aa36.25■■■■□ 3.39
SNF8-217ENST00000576353 ABCC5O15440 1437 aa36.25■■■■□ 3.39
SNF8-217ENST00000576353 CEBPAP49715 358 aaPredicted RBP36.22■■■■□ 3.39
SNF8-217ENST00000576353 KIF3BO15066 747 aa36.21■■■■□ 3.39
SNF8-217ENST00000576353 DAPK1P53355 1430 aa36.21■■■■□ 3.39
SNF8-217ENST00000576353 FAM50AQ14320 339 aaKnown RBP36.21■■■■□ 3.39
SNF8-217ENST00000576353 PPARGC1BQ86YN6 1023 aaKnown RBP36.21■■■■□ 3.39
SNF8-217ENST00000576353 SHANK2Q9UPX8 1470 aa36.19■■■■□ 3.38
SNF8-217ENST00000576353 DNMT1P26358 1616 aaKnown RBP36.16■■■■□ 3.38
SNF8-217ENST00000576353 ZMYM3Q14202 1370 aa36.11■■■■□ 3.37
SNF8-217ENST00000576353 RRP7BPQ9NSQ0 103 aa36.09■■■■□ 3.37
SNF8-217ENST00000576353 KIF15Q9NS87 1388 aa36.09■■■■□ 3.37
SNF8-217ENST00000576353 CROCC2H7BZ55 1655 aa36.08■■■■□ 3.37
SNF8-217ENST00000576353 CHIC2Q9UKJ5 165 aa36.08■■■■□ 3.37
SNF8-217ENST00000576353 ANKRD30AQ9BXX3 1397 aa36.07■■■■□ 3.36
SNF8-217ENST00000576353 DUOX2Q9NRD8 1548 aa36.07■■■■□ 3.36
SNF8-217ENST00000576353 LMTK3Q96Q04 1460 aa36.05■■■■□ 3.36
SNF8-217ENST00000576353 MROH2AA6NES4 1674 aa36.03■■■■□ 3.36
SNF8-217ENST00000576353 C3P01024 1663 aa36.03■■■■□ 3.36
SNF8-217ENST00000576353 WASHC2CQ9Y4E1 1318 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms