RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
CDC27-218ENST00000575830 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
CDC27-218ENST00000575830 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
CDC27-218ENST00000575830 G3V3G9 751 aa8.81□□□□□ -1
CDC27-218ENST00000575830 MFSD10Q14728 455 aa8.81□□□□□ -1
CDC27-218ENST00000575830 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
CDC27-218ENST00000575830 GPHNQ9NQX3 736 aaPredicted RBP8.81□□□□□ -1
CDC27-218ENST00000575830 C2orf72A6NCS6 295 aa8.78□□□□□ -1
CDC27-218ENST00000575830 PDE4AP27815 886 aa8.77□□□□□ -1.01
CDC27-218ENST00000575830 FOXK1P85037 733 aa8.77□□□□□ -1.01
CDC27-218ENST00000575830 SLAIN1Q8ND83 568 aa8.75□□□□□ -1.01
CDC27-218ENST00000575830 DSG2Q14126 1118 aa8.73□□□□□ -1.01
CDC27-218ENST00000575830 VSIG10Q8N0Z9 540 aa8.73□□□□□ -1.01
CDC27-218ENST00000575830 TMC2Q8TDI7 906 aa8.73□□□□□ -1.01
CDC27-218ENST00000575830 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
CDC27-218ENST00000575830 HAP1P54257 671 aaPredicted RBP8.72□□□□□ -1.01
CDC27-218ENST00000575830 SLC34A2O95436 690 aa8.71□□□□□ -1.02
CDC27-218ENST00000575830 HOXB3P14651 431 aaPredicted RBP8.71□□□□□ -1.02
CDC27-218ENST00000575830 CAMK2BQ13554 666 aa8.71□□□□□ -1.02
CDC27-218ENST00000575830 LARP6Q9BRS8 491 aaKnown RBP8.71□□□□□ -1.02
CDC27-218ENST00000575830 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
CDC27-218ENST00000575830 DDX27Q96GQ7 796 aaKnown RBP8.69□□□□□ -1.02
CDC27-218ENST00000575830 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
CDC27-218ENST00000575830 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
CDC27-218ENST00000575830 PTCD2Q8WV60 388 aaKnown RBP8.65□□□□□ -1.02
CDC27-218ENST00000575830 SNPHO15079 494 aa8.64□□□□□ -1.03
CDC27-218ENST00000575830 KDM4FA0A1W2PPD8 638 aa8.63□□□□□ -1.03
CDC27-218ENST00000575830 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
CDC27-218ENST00000575830 OXER1Q8TDS5 423 aa8.63□□□□□ -1.03
CDC27-218ENST00000575830 ZSWIM6Q9HCJ5 1215 aa8.63□□□□□ -1.03
CDC27-218ENST00000575830 DOK7Q18PE1 504 aa8.62□□□□□ -1.03
CDC27-218ENST00000575830 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
CDC27-218ENST00000575830 EMILIN3Q9NT22 766 aa8.62□□□□□ -1.03
CDC27-218ENST00000575830 E2F4Q16254 413 aa8.61□□□□□ -1.03
CDC27-218ENST00000575830 GPR153Q6NV75 609 aa8.61□□□□□ -1.03
CDC27-218ENST00000575830 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
CDC27-218ENST00000575830 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
CDC27-218ENST00000575830 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
CDC27-218ENST00000575830 ST18O60284 1047 aa8.56□□□□□ -1.04
CDC27-218ENST00000575830 KCNV2Q8TDN2 545 aa8.56□□□□□ -1.04
CDC27-218ENST00000575830 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
CDC27-218ENST00000575830 ANO8Q9HCE9 1232 aaPredicted RBP8.56□□□□□ -1.04
CDC27-218ENST00000575830 RIMBP2O15034 1052 aa8.53□□□□□ -1.04
CDC27-218ENST00000575830 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
CDC27-218ENST00000575830 P3H3Q8IVL6 736 aa8.52□□□□□ -1.05
CDC27-218ENST00000575830 TBC1D12O60347 775 aa8.51□□□□□ -1.05
CDC27-218ENST00000575830 PTGER2P43116 358 aa8.5□□□□□ -1.05
CDC27-218ENST00000575830 PDIA6Q15084 440 aa8.5□□□□□ -1.05
CDC27-218ENST00000575830 ZNF710Q8N1W2 664 aa8.5□□□□□ -1.05
CDC27-218ENST00000575830 KHSRPQ92945 711 aaKnown RBP eCLIP8.5□□□□□ -1.051e-6■■□□□ 13.4
CDC27-218ENST00000575830 SPDYE16A6NNV3 312 aaPredicted RBP8.49□□□□□ -1.05
CDC27-218ENST00000575830 DPYSL4O14531 572 aa8.49□□□□□ -1.05
CDC27-218ENST00000575830 FAM163AQ96GL9 167 aaPredicted RBP8.49□□□□□ -1.05
CDC27-218ENST00000575830 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
CDC27-218ENST00000575830 UPF1Q92900 1129 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDC27-218ENST00000575830 EVI5O60447 810 aa8.47□□□□□ -1.05
CDC27-218ENST00000575830 NUDT7P0C024 238 aa8.45□□□□□ -1.06
CDC27-218ENST00000575830 POTEB3A0JP26 581 aa8.44□□□□□ -1.06
CDC27-218ENST00000575830 POTEBQ6S5H4 581 aa8.44□□□□□ -1.06
CDC27-218ENST00000575830 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
CDC27-218ENST00000575830 FOSBP53539 338 aa8.42□□□□□ -1.06
CDC27-218ENST00000575830 LHX6Q9UPM6 363 aa8.42□□□□□ -1.06
CDC27-218ENST00000575830 MARVELD3Q96A59 401 aa8.41□□□□□ -1.06
CDC27-218ENST00000575830 TESPA1A2RU30 521 aaPredicted RBP8.4□□□□□ -1.06
CDC27-218ENST00000575830 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
CDC27-218ENST00000575830 JPH4Q96JJ6 628 aa8.4□□□□□ -1.06
CDC27-218ENST00000575830 EMP3P54852 163 aa8.39□□□□□ -1.07
CDC27-218ENST00000575830 PHF14O94880 888 aa8.38□□□□□ -1.07
CDC27-218ENST00000575830 PCDHGA10Q9Y5H3 936 aa8.38□□□□□ -1.07
CDC27-218ENST00000575830 SEMA3EO15041 775 aa8.37□□□□□ -1.07
CDC27-218ENST00000575830 POTEGQ6S5H5 508 aa8.36□□□□□ -1.07
CDC27-218ENST00000575830 ZNF687Q8N1G0 1237 aa8.36□□□□□ -1.07
CDC27-218ENST00000575830 HS3ST6Q96QI5 342 aa8.36□□□□□ -1.07
CDC27-218ENST00000575830 EPAS1Q99814 870 aa8.36□□□□□ -1.07
CDC27-218ENST00000575830 ERBB3P21860 1342 aa8.35□□□□□ -1.07
CDC27-218ENST00000575830 POTEMA6NI47 508 aa8.35□□□□□ -1.07
CDC27-218ENST00000575830 OSBPP22059 807 aa8.35□□□□□ -1.07
CDC27-218ENST00000575830 MLLT3P42568 568 aaPredicted RBP8.35□□□□□ -1.07
CDC27-218ENST00000575830 FAM205CA6NFA0 338 aa8.34□□□□□ -1.07
CDC27-218ENST00000575830 PRIM1P49642 420 aaKnown RBP8.34□□□□□ -1.07
CDC27-218ENST00000575830 VARS2Q5ST30 1063 aaKnown RBP8.34□□□□□ -1.07
CDC27-218ENST00000575830 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
CDC27-218ENST00000575830 FBXW7Q969H0 707 aa8.33□□□□□ -1.08
CDC27-218ENST00000575830 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
CDC27-218ENST00000575830 TYW1BQ6NUM6 668 aa8.32□□□□□ -1.08
CDC27-218ENST00000575830 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
CDC27-218ENST00000575830 DDX12PQ92771 950 aa8.32□□□□□ -1.08
CDC27-218ENST00000575830 ZDHHC16Q969W1 377 aa8.32□□□□□ -1.08
CDC27-218ENST00000575830 PPP4R3BQ5MIZ7 849 aa8.31□□□□□ -1.08
CDC27-218ENST00000575830 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
CDC27-218ENST00000575830 EN1Q05925 392 aaPredicted RBP8.3□□□□□ -1.08
CDC27-218ENST00000575830 PBX2P40425 430 aa8.29□□□□□ -1.08
CDC27-218ENST00000575830 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
CDC27-218ENST00000575830 GRXCR2A6NFK2 248 aa8.27□□□□□ -1.09
CDC27-218ENST00000575830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDC27-218ENST00000575830 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
CDC27-218ENST00000575830 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
CDC27-218ENST00000575830 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
CDC27-218ENST00000575830 NBR1Q14596 966 aa8.26□□□□□ -1.09
CDC27-218ENST00000575830 C6orf132Q5T0Z8 1188 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms