RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 PLCH2O75038 1416 aa26.65■■□□□ 1.86
TMEM88-202ENST00000574668 HECW1Q76N89 1606 aa26.63■■□□□ 1.85
TMEM88-202ENST00000574668 SCAPERQ9BY12 1400 aa26.63■■□□□ 1.85
TMEM88-202ENST00000574668 CEP162Q5TB80 1403 aa26.62■■□□□ 1.85
TMEM88-202ENST00000574668 FMN1Q68DA7 1419 aa26.61■■□□□ 1.85
TMEM88-202ENST00000574668 POGZQ7Z3K3 1410 aa26.6■■□□□ 1.85
TMEM88-202ENST00000574668 MLECQ14165 292 aa26.6■■□□□ 1.85
TMEM88-202ENST00000574668 MAGI2Q86UL8 1455 aa26.59■■□□□ 1.85
TMEM88-202ENST00000574668 FBXO41Q8TF61 875 aa26.57■■□□□ 1.84
TMEM88-202ENST00000574668 HSPA2P54652 639 aa26.56■■□□□ 1.84
TMEM88-202ENST00000574668 KIF14Q15058 1648 aa26.56■■□□□ 1.84
TMEM88-202ENST00000574668 EFCAB2Q5VUJ9 269 aa26.53■■□□□ 1.84
TMEM88-202ENST00000574668 MYO5CQ9NQX4 1742 aa26.53■■□□□ 1.84
TMEM88-202ENST00000574668 CDK11AQ9UQ88 783 aaPredicted RBP26.51■■□□□ 1.83
TMEM88-202ENST00000574668 ATP10AO60312 1499 aa26.49■■□□□ 1.83
TMEM88-202ENST00000574668 TROQ12816 1431 aaPredicted RBP26.48■■□□□ 1.83
TMEM88-202ENST00000574668 FER1L4A9Z1Z3 1794 aa26.48■■□□□ 1.83
TMEM88-202ENST00000574668 LRRIQ1Q96JM4 1722 aa26.47■■□□□ 1.83
TMEM88-202ENST00000574668 C9orf84Q5VXU9 1444 aa26.47■■□□□ 1.83
TMEM88-202ENST00000574668 ARHGAP5Q13017 1502 aa26.45■■□□□ 1.83
TMEM88-202ENST00000574668 AFAP1Q8N556 730 aa26.44■■□□□ 1.82
TMEM88-202ENST00000574668 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
TMEM88-202ENST00000574668 ZNF518AQ6AHZ1 1483 aa26.42■■□□□ 1.82
TMEM88-202ENST00000574668 CEBPAP49715 358 aaPredicted RBP26.39■■□□□ 1.82
TMEM88-202ENST00000574668 KDM5CP41229 1560 aa26.38■■□□□ 1.81
TMEM88-202ENST00000574668 MYT1LQ9UL68 1186 aa26.37■■□□□ 1.81
TMEM88-202ENST00000574668 CASKIN1Q8WXD9 1431 aa26.35■■□□□ 1.81
TMEM88-202ENST00000574668 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
TMEM88-202ENST00000574668 DIP2CQ9Y2E4 1556 aa26.33■■□□□ 1.81
TMEM88-202ENST00000574668 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
TMEM88-202ENST00000574668 PREX2Q70Z35 1606 aa26.29■■□□□ 1.8
TMEM88-202ENST00000574668 ABCA6Q8N139 1617 aa26.29■■□□□ 1.8
TMEM88-202ENST00000574668 CCDC18Q5T9S5 1454 aa26.29■■□□□ 1.8
TMEM88-202ENST00000574668 FYCO1Q9BQS8 1478 aa26.29■■□□□ 1.8
TMEM88-202ENST00000574668 PREX1Q8TCU6 1659 aa26.28■■□□□ 1.8
TMEM88-202ENST00000574668 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
TMEM88-202ENST00000574668 ABCC1P33527 1531 aa26.28■■□□□ 1.8
TMEM88-202ENST00000574668 MLH3Q9UHC1 1453 aa26.27■■□□□ 1.8
TMEM88-202ENST00000574668 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
TMEM88-202ENST00000574668 REREQ9P2R6 1566 aa26.24■■□□□ 1.79
TMEM88-202ENST00000574668 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
TMEM88-202ENST00000574668 CDC42BPAQ5VT25 1732 aa26.2■■□□□ 1.79
TMEM88-202ENST00000574668 UHRF1BP1Q6BDS2 1440 aa26.19■■□□□ 1.78
TMEM88-202ENST00000574668 ZNF777Q9ULD5 760 aaPredicted RBP26.18■■□□□ 1.78
TMEM88-202ENST00000574668 AGLP35573 1532 aa26.18■■□□□ 1.78
TMEM88-202ENST00000574668 KIDINS220Q9ULH0 1771 aa26.17■■□□□ 1.78
TMEM88-202ENST00000574668 C3P01024 1663 aa26.16■■□□□ 1.78
TMEM88-202ENST00000574668 STRCQ7RTU9 1775 aa26.16■■□□□ 1.78
TMEM88-202ENST00000574668 SAMD9LQ8IVG5 1584 aa26.14■■□□□ 1.78
TMEM88-202ENST00000574668 ESF1Q9H501 851 aaKnown RBP26.13■■□□□ 1.77
TMEM88-202ENST00000574668 APLP2Q06481 763 aa26.12■■□□□ 1.77
TMEM88-202ENST00000574668 GPATCH8Q9UKJ3 1502 aaKnown RBP26.12■■□□□ 1.77
TMEM88-202ENST00000574668 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
TMEM88-202ENST00000574668 HNRNPMP52272 730 aaKnown RBP eCLIP26.1■■□□□ 1.77
TMEM88-202ENST00000574668 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
TMEM88-202ENST00000574668 SPAG9O60271 1321 aaKnown RBP26.06■■□□□ 1.76
TMEM88-202ENST00000574668 SETD1BQ9UPS6 1966 aaKnown RBP26.06■■□□□ 1.76
TMEM88-202ENST00000574668 MTUS2Q5JR59 1369 aa26.04■■□□□ 1.76
TMEM88-202ENST00000574668 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
TMEM88-202ENST00000574668 CFDP1Q9UEE9 299 aaPredicted RBP26.02■■□□□ 1.76
TMEM88-202ENST00000574668 CCNB3Q8WWL7 1395 aa26.01■■□□□ 1.75
TMEM88-202ENST00000574668 SUPT6HQ7KZ85 1726 aaKnown RBP26■■□□□ 1.75
TMEM88-202ENST00000574668 ATP7AQ04656 1500 aa26■■□□□ 1.75
TMEM88-202ENST00000574668 PTPRTO14522 1441 aa25.99■■□□□ 1.75
TMEM88-202ENST00000574668 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
TMEM88-202ENST00000574668 KIAA1107Q9UPP5 1409 aa25.98■■□□□ 1.75
TMEM88-202ENST00000574668 ZMYM3Q14202 1370 aa25.97■■□□□ 1.75
TMEM88-202ENST00000574668 INO80Q9ULG1 1556 aaPredicted RBP25.97■■□□□ 1.75
TMEM88-202ENST00000574668 MAP3K1Q13233 1512 aa25.97■■□□□ 1.75
TMEM88-202ENST00000574668 PLEKHH2Q8IVE3 1493 aa25.96■■□□□ 1.75
TMEM88-202ENST00000574668 NCOA1Q15788 1441 aa25.96■■□□□ 1.75
TMEM88-202ENST00000574668 A2MP01023 1474 aa25.95■■□□□ 1.74
TMEM88-202ENST00000574668 MROH2AA6NES4 1674 aa25.95■■□□□ 1.74
TMEM88-202ENST00000574668 PLXNC1O60486 1568 aa25.95■■□□□ 1.74
TMEM88-202ENST00000574668 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
TMEM88-202ENST00000574668 NPATQ14207 1427 aa25.94■■□□□ 1.74
TMEM88-202ENST00000574668 EHBP1L1Q8N3D4 1523 aa25.93■■□□□ 1.74
TMEM88-202ENST00000574668 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
TMEM88-202ENST00000574668 CAMSAP1Q5T5Y3 1602 aa25.92■■□□□ 1.74
TMEM88-202ENST00000574668 GGT6Q6P531 493 aa25.91■■□□□ 1.74
TMEM88-202ENST00000574668 LTBP4Q8N2S1 1624 aa25.9■■□□□ 1.74
TMEM88-202ENST00000574668 KANK4Q5T7N3 995 aaPredicted RBP25.9■■□□□ 1.74
TMEM88-202ENST00000574668 LRRC9Q6ZRR7 1453 aa25.9■■□□□ 1.74
TMEM88-202ENST00000574668 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
TMEM88-202ENST00000574668 MBD5Q9P267 1494 aa25.85■■□□□ 1.73
TMEM88-202ENST00000574668 PTPRKQ15262 1439 aa25.85■■□□□ 1.73
TMEM88-202ENST00000574668 MYO3AQ8NEV4 1616 aa25.84■■□□□ 1.73
TMEM88-202ENST00000574668 ADGBQ8N7X0 1667 aa25.82■■□□□ 1.72
TMEM88-202ENST00000574668 CEP170BQ9Y4F5 1589 aaPredicted RBP25.79■■□□□ 1.72
TMEM88-202ENST00000574668 ZNF142P52746 1687 aaPredicted RBP25.79■■□□□ 1.72
TMEM88-202ENST00000574668 DISP3Q9P2K9 1392 aa25.79■■□□□ 1.72
TMEM88-202ENST00000574668 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
TMEM88-202ENST00000574668 ZNF335Q9H4Z2 1342 aaPredicted RBP25.78■■□□□ 1.72
TMEM88-202ENST00000574668 RTEL1-TNFRSF6BF6WH68 1400 aa25.76■■□□□ 1.71
TMEM88-202ENST00000574668 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
TMEM88-202ENST00000574668 PLA2R1Q13018 1463 aa25.74■■□□□ 1.71
TMEM88-202ENST00000574668 IQSEC2Q5JU85 1478 aa25.74■■□□□ 1.71
TMEM88-202ENST00000574668 ILDR2Q71H61 639 aa25.74■■□□□ 1.71
TMEM88-202ENST00000574668 PPP6R1Q9UPN7 881 aa25.74■■□□□ 1.71
TMEM88-202ENST00000574668 TCOF1Q13428 1488 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms