RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 POGZQ7Z3K3 1410 aa31.69■■■□□ 2.66
SCARF1-208ENST00000574545 ARHGEF40Q8TER5 1519 aa31.67■■■□□ 2.66
SCARF1-208ENST00000574545 CDC42BPBQ9Y5S2 1711 aa31.66■■■□□ 2.66
SCARF1-208ENST00000574545 MAGI2Q86UL8 1455 aa31.66■■■□□ 2.66
SCARF1-208ENST00000574545 ARHGAP5Q13017 1502 aa31.66■■■□□ 2.66
SCARF1-208ENST00000574545 YEATS2Q9ULM3 1422 aa31.64■■■□□ 2.66
SCARF1-208ENST00000574545 PREX2Q70Z35 1606 aa31.61■■■□□ 2.65
SCARF1-208ENST00000574545 ZFYVE16Q7Z3T8 1539 aa31.59■■■□□ 2.65
SCARF1-208ENST00000574545 ADAMTSL3P82987 1691 aa31.59■■■□□ 2.65
SCARF1-208ENST00000574545 CDC42BPAQ5VT25 1732 aa31.56■■■□□ 2.64
SCARF1-208ENST00000574545 AFAP1Q8N556 730 aa31.56■■■□□ 2.64
SCARF1-208ENST00000574545 ARID4BQ4LE39 1312 aaPredicted RBP31.55■■■□□ 2.64
SCARF1-208ENST00000574545 BCORL1Q5H9F3 1711 aa31.55■■■□□ 2.64
SCARF1-208ENST00000574545 GPATCH8Q9UKJ3 1502 aaKnown RBP31.54■■■□□ 2.64
SCARF1-208ENST00000574545 ZNF518AQ6AHZ1 1483 aa31.54■■■□□ 2.64
SCARF1-208ENST00000574545 ARHGEF12Q9NZN5 1544 aa31.54■■■□□ 2.64
SCARF1-208ENST00000574545 KDM5CP41229 1560 aa31.53■■■□□ 2.64
SCARF1-208ENST00000574545 MTUS2Q5JR59 1369 aa31.52■■■□□ 2.64
SCARF1-208ENST00000574545 SIGLEC1Q9BZZ2 1709 aa31.51■■■□□ 2.63
SCARF1-208ENST00000574545 ABCC1P33527 1531 aa31.5■■■□□ 2.63
SCARF1-208ENST00000574545 TRAPPC8Q9Y2L5 1435 aa31.49■■■□□ 2.63
SCARF1-208ENST00000574545 ATP10AO60312 1499 aa31.48■■■□□ 2.63
SCARF1-208ENST00000574545 PTPRMP28827 1452 aa31.46■■■□□ 2.63
SCARF1-208ENST00000574545 MLH3Q9UHC1 1453 aa31.44■■■□□ 2.62
SCARF1-208ENST00000574545 VPS8Q8N3P4 1428 aa31.43■■■□□ 2.62
SCARF1-208ENST00000574545 MADDQ8WXG6 1647 aa31.43■■■□□ 2.62
SCARF1-208ENST00000574545 ITSN2Q9NZM3 1697 aa31.43■■■□□ 2.62
SCARF1-208ENST00000574545 EHBP1L1Q8N3D4 1523 aa31.43■■■□□ 2.62
SCARF1-208ENST00000574545 CCNB3Q8WWL7 1395 aa31.43■■■□□ 2.62
SCARF1-208ENST00000574545 C9orf84Q5VXU9 1444 aa31.42■■■□□ 2.62
SCARF1-208ENST00000574545 SAMD9LQ8IVG5 1584 aa31.42■■■□□ 2.62
SCARF1-208ENST00000574545 CFDP1Q9UEE9 299 aaPredicted RBP31.4■■■□□ 2.62
SCARF1-208ENST00000574545 ZNF777Q9ULD5 760 aaPredicted RBP31.4■■■□□ 2.62
SCARF1-208ENST00000574545 HECW2Q9P2P5 1572 aa31.39■■■□□ 2.62
SCARF1-208ENST00000574545 KIAA1107Q9UPP5 1409 aa31.36■■■□□ 2.61
SCARF1-208ENST00000574545 TIAM1Q13009 1591 aa31.35■■■□□ 2.61
SCARF1-208ENST00000574545 DIP2CQ9Y2E4 1556 aa31.35■■■□□ 2.61
SCARF1-208ENST00000574545 HNRNPMP52272 730 aaKnown RBP eCLIP31.34■■■□□ 2.61
SCARF1-208ENST00000574545 SYCP2Q9BX26 1530 aa31.33■■■□□ 2.61
SCARF1-208ENST00000574545 REREQ9P2R6 1566 aa31.32■■■□□ 2.6
SCARF1-208ENST00000574545 MLECQ14165 292 aa31.32■■■□□ 2.6
SCARF1-208ENST00000574545 ABCA6Q8N139 1617 aa31.31■■■□□ 2.6
SCARF1-208ENST00000574545 MYT1LQ9UL68 1186 aa31.31■■■□□ 2.6
SCARF1-208ENST00000574545 PLEKHH2Q8IVE3 1493 aa31.31■■■□□ 2.6
SCARF1-208ENST00000574545 KIDINS220Q9ULH0 1771 aa31.3■■■□□ 2.6
SCARF1-208ENST00000574545 RIMS1Q86UR5 1692 aaKnown RBP31.3■■■□□ 2.6
SCARF1-208ENST00000574545 NCOA2Q15596 1464 aa31.28■■■□□ 2.6
SCARF1-208ENST00000574545 ZNF644Q9H582 1327 aaPredicted RBP31.27■■■□□ 2.6
SCARF1-208ENST00000574545 LRRC9Q6ZRR7 1453 aa31.25■■■□□ 2.59
SCARF1-208ENST00000574545 MAP3K1Q13233 1512 aa31.24■■■□□ 2.59
SCARF1-208ENST00000574545 SPAG9O60271 1321 aaKnown RBP31.24■■■□□ 2.59
SCARF1-208ENST00000574545 SUPT6HQ7KZ85 1726 aaKnown RBP31.23■■■□□ 2.59
SCARF1-208ENST00000574545 AGLP35573 1532 aa31.23■■■□□ 2.59
SCARF1-208ENST00000574545 MBD5Q9P267 1494 aa31.22■■■□□ 2.59
SCARF1-208ENST00000574545 KANK4Q5T7N3 995 aaPredicted RBP31.2■■■□□ 2.59
SCARF1-208ENST00000574545 FER1L4A9Z1Z3 1794 aa31.2■■■□□ 2.58
SCARF1-208ENST00000574545 ATP7AQ04656 1500 aa31.15■■■□□ 2.58
SCARF1-208ENST00000574545 INO80Q9ULG1 1556 aaPredicted RBP31.15■■■□□ 2.58
SCARF1-208ENST00000574545 LMTK3Q96Q04 1460 aa31.11■■■□□ 2.57
SCARF1-208ENST00000574545 PLPPR3Q6T4P5 718 aa31.09■■■□□ 2.57
SCARF1-208ENST00000574545 CAMSAP2Q08AD1 1489 aa31.08■■■□□ 2.57
SCARF1-208ENST00000574545 RTEL1-TNFRSF6BF6WH68 1400 aa31.07■■■□□ 2.57
SCARF1-208ENST00000574545 CEBPAP49715 358 aaPredicted RBP31.07■■■□□ 2.56
SCARF1-208ENST00000574545 RSPH4AQ5TD94 716 aa31.06■■■□□ 2.56
SCARF1-208ENST00000574545 PLXNC1O60486 1568 aa31.05■■■□□ 2.56
SCARF1-208ENST00000574545 A2MP01023 1474 aa31.05■■■□□ 2.56
SCARF1-208ENST00000574545 CCDC141Q6ZP82 1450 aa31.02■■■□□ 2.56
SCARF1-208ENST00000574545 ARHGEF5Q12774 1597 aa30.98■■■□□ 2.55
SCARF1-208ENST00000574545 MYOM3Q5VTT5 1437 aa30.98■■■□□ 2.55
SCARF1-208ENST00000574545 MIA2Q96PC5 1412 aa30.98■■■□□ 2.55
SCARF1-208ENST00000574545 ADGBQ8N7X0 1667 aa30.97■■■□□ 2.55
SCARF1-208ENST00000574545 APLP2Q06481 763 aa30.96■■■□□ 2.55
SCARF1-208ENST00000574545 DHX29Q7Z478 1369 aaKnown RBP30.95■■■□□ 2.55
SCARF1-208ENST00000574545 CNTLNQ9NXG0 1405 aa30.95■■■□□ 2.54
SCARF1-208ENST00000574545 HSPA2P54652 639 aa30.94■■■□□ 2.54
SCARF1-208ENST00000574545 ESF1Q9H501 851 aaKnown RBP30.94■■■□□ 2.54
SCARF1-208ENST00000574545 C3P01024 1663 aa30.93■■■□□ 2.54
SCARF1-208ENST00000574545 SETD1BQ9UPS6 1966 aaKnown RBP30.92■■■□□ 2.54
SCARF1-208ENST00000574545 TSPY4P0CV99 314 aa30.89■■■□□ 2.54
SCARF1-208ENST00000574545 TSPY10P0CW01 314 aa30.89■■■□□ 2.54
SCARF1-208ENST00000574545 GGT6Q6P531 493 aa30.88■■■□□ 2.53
SCARF1-208ENST00000574545 PREX1Q8TCU6 1659 aa30.87■■■□□ 2.53
SCARF1-208ENST00000574545 PPP6R1Q9UPN7 881 aa30.87■■■□□ 2.53
SCARF1-208ENST00000574545 ZMYM3Q14202 1370 aa30.87■■■□□ 2.53
SCARF1-208ENST00000574545 MROH2AA6NES4 1674 aa30.85■■■□□ 2.53
SCARF1-208ENST00000574545 MAST1Q9Y2H9 1570 aa30.83■■■□□ 2.53
SCARF1-208ENST00000574545 UHRF1BP1Q6BDS2 1440 aa30.81■■■□□ 2.52
SCARF1-208ENST00000574545 CLTCQ00610 1675 aaKnown RBP30.79■■■□□ 2.52
SCARF1-208ENST00000574545 KIF3BO15066 747 aa30.79■■■□□ 2.52
SCARF1-208ENST00000574545 NPATQ14207 1427 aa30.77■■■□□ 2.52
SCARF1-208ENST00000574545 FGD6Q6ZV73 1430 aa30.75■■■□□ 2.51
SCARF1-208ENST00000574545 PTPN23Q9H3S7 1636 aa30.75■■■□□ 2.51
SCARF1-208ENST00000574545 TCOF1Q13428 1488 aaKnown RBP30.74■■■□□ 2.51
SCARF1-208ENST00000574545 ABCC5O15440 1437 aa30.73■■■□□ 2.51
SCARF1-208ENST00000574545 PTPRKQ15262 1439 aa30.73■■■□□ 2.51
SCARF1-208ENST00000574545 SHANK2Q9UPX8 1470 aa30.67■■■□□ 2.5
SCARF1-208ENST00000574545 FAM135AQ9P2D6 1515 aa30.67■■■□□ 2.5
SCARF1-208ENST00000574545 ILDR1Q86SU0 546 aaPredicted RBP30.66■■■□□ 2.5
SCARF1-208ENST00000574545 DAPK1P53355 1430 aa30.65■■■□□ 2.5
SCARF1-208ENST00000574545 STRCQ7RTU9 1775 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms