RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 MIA2Q96PC5 1412 aa32.29■■■□□ 2.76
CXCL16-203ENST00000574412 ZNF644Q9H582 1327 aaPredicted RBP32.27■■■□□ 2.76
CXCL16-203ENST00000574412 FAM69CQ0P6D2 419 aa32.27■■■□□ 2.76
CXCL16-203ENST00000574412 KIF13AQ9H1H9 1805 aa32.26■■■□□ 2.75
CXCL16-203ENST00000574412 PLCH2O75038 1416 aa32.26■■■□□ 2.75
CXCL16-203ENST00000574412 GLI2P10070 1586 aa32.24■■■□□ 2.75
CXCL16-203ENST00000574412 CD109Q6YHK3 1445 aa32.24■■■□□ 2.75
CXCL16-203ENST00000574412 CAMSAP2Q08AD1 1489 aa32.22■■■□□ 2.75
CXCL16-203ENST00000574412 MAP3K4Q9Y6R4 1608 aa32.22■■■□□ 2.75
CXCL16-203ENST00000574412 TCOF1Q13428 1488 aaKnown RBP32.21■■■□□ 2.75
CXCL16-203ENST00000574412 ITGAEP38570 1179 aa32.21■■■□□ 2.75
CXCL16-203ENST00000574412 TSPOAP1O95153 1857 aa32.2■■■□□ 2.75
CXCL16-203ENST00000574412 SAMD9LQ8IVG5 1584 aa32.2■■■□□ 2.74
CXCL16-203ENST00000574412 ARAP3Q8WWN8 1544 aa32.15■■■□□ 2.74
CXCL16-203ENST00000574412 FANCAO15360 1455 aa32.14■■■□□ 2.74
CXCL16-203ENST00000574412 EFCAB2Q5VUJ9 269 aa32.14■■■□□ 2.74
CXCL16-203ENST00000574412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.12■■■□□ 2.73
CXCL16-203ENST00000574412 SYCP2Q9BX26 1530 aa32.08■■■□□ 2.73
CXCL16-203ENST00000574412 HNRNPMP52272 730 aaKnown RBP eCLIP32.07■■■□□ 2.72
CXCL16-203ENST00000574412 PPRC1Q5VV67 1664 aaKnown RBP32.06■■■□□ 2.72
CXCL16-203ENST00000574412 TRHP20396 242 aaPredicted RBP32.05■■■□□ 2.72
CXCL16-203ENST00000574412 DNMT1P26358 1616 aaKnown RBP32.05■■■□□ 2.72
CXCL16-203ENST00000574412 ABCC1P33527 1531 aa32.04■■■□□ 2.72
CXCL16-203ENST00000574412 CFAP74Q9C0B2 1584 aa32.04■■■□□ 2.72
CXCL16-203ENST00000574412 ARHGEF12Q9NZN5 1544 aa32.02■■■□□ 2.72
CXCL16-203ENST00000574412 PTPRKQ15262 1439 aa32.02■■■□□ 2.72
CXCL16-203ENST00000574412 DAPK1P53355 1430 aa32.01■■■□□ 2.71
CXCL16-203ENST00000574412 AKNAQ7Z591 1439 aa32.01■■■□□ 2.71
CXCL16-203ENST00000574412 PLEKHH2Q8IVE3 1493 aa32■■■□□ 2.71
CXCL16-203ENST00000574412 ADGRL1O94910 1474 aa32■■■□□ 2.71
CXCL16-203ENST00000574412 ABCC5O15440 1437 aa32■■■□□ 2.71
CXCL16-203ENST00000574412 MBD5Q9P267 1494 aa31.99■■■□□ 2.71
CXCL16-203ENST00000574412 CROCC2H7BZ55 1655 aa31.98■■■□□ 2.71
CXCL16-203ENST00000574412 ARHGEF5Q12774 1597 aa31.97■■■□□ 2.71
CXCL16-203ENST00000574412 CHIC2Q9UKJ5 165 aa31.96■■■□□ 2.71
CXCL16-203ENST00000574412 KIAA1107Q9UPP5 1409 aa31.96■■■□□ 2.71
CXCL16-203ENST00000574412 NEO1Q92859 1461 aa31.95■■■□□ 2.71
CXCL16-203ENST00000574412 SCAPERQ9BY12 1400 aa31.94■■■□□ 2.7
CXCL16-203ENST00000574412 CCDC141Q6ZP82 1450 aa31.93■■■□□ 2.7
CXCL16-203ENST00000574412 TEX14Q8IWB6 1497 aa31.93■■■□□ 2.7
CXCL16-203ENST00000574412 TRAPPC8Q9Y2L5 1435 aa31.92■■■□□ 2.7
CXCL16-203ENST00000574412 AFAP1Q8N556 730 aa31.86■■■□□ 2.69
CXCL16-203ENST00000574412 ADGBQ8N7X0 1667 aa31.85■■■□□ 2.69
CXCL16-203ENST00000574412 C9orf84Q5VXU9 1444 aa31.85■■■□□ 2.69
CXCL16-203ENST00000574412 TSPY4P0CV99 314 aa31.84■■■□□ 2.69
CXCL16-203ENST00000574412 TSPY10P0CW01 314 aa31.84■■■□□ 2.69
CXCL16-203ENST00000574412 RSPH4AQ5TD94 716 aa31.83■■■□□ 2.69
CXCL16-203ENST00000574412 SHANK2Q9UPX8 1470 aa31.83■■■□□ 2.69
CXCL16-203ENST00000574412 RRP7BPQ9NSQ0 103 aa31.82■■■□□ 2.68
CXCL16-203ENST00000574412 POGZQ7Z3K3 1410 aa31.8■■■□□ 2.68
CXCL16-203ENST00000574412 DENND4BO75064 1496 aaPredicted RBP31.79■■■□□ 2.68
CXCL16-203ENST00000574412 RAPGEF3O95398 923 aa31.79■■■□□ 2.68
CXCL16-203ENST00000574412 RICTORQ6R327 1708 aa31.78■■■□□ 2.68
CXCL16-203ENST00000574412 ZNF518AQ6AHZ1 1483 aa31.77■■■□□ 2.68
CXCL16-203ENST00000574412 MAST1Q9Y2H9 1570 aa31.77■■■□□ 2.68
CXCL16-203ENST00000574412 SPAG9O60271 1321 aaKnown RBP31.75■■■□□ 2.67
CXCL16-203ENST00000574412 ADGRL2O95490 1459 aa31.74■■■□□ 2.67
CXCL16-203ENST00000574412 MYT1LQ9UL68 1186 aa31.73■■■□□ 2.67
CXCL16-203ENST00000574412 GCC2Q8IWJ2 1684 aa31.73■■■□□ 2.67
CXCL16-203ENST00000574412 FRMPD1Q5SYB0 1578 aa31.73■■■□□ 2.67
CXCL16-203ENST00000574412 ROCK1Q13464 1354 aa31.73■■■□□ 2.67
CXCL16-203ENST00000574412 NCOA1Q15788 1441 aa31.72■■■□□ 2.67
CXCL16-203ENST00000574412 ANKRD30AQ9BXX3 1397 aa31.72■■■□□ 2.67
CXCL16-203ENST00000574412 ZFYVE16Q7Z3T8 1539 aa31.72■■■□□ 2.67
CXCL16-203ENST00000574412 HFM1A2PYH4 1435 aa31.72■■■□□ 2.67
CXCL16-203ENST00000574412 NAIPQ13075 1403 aa31.72■■■□□ 2.67
CXCL16-203ENST00000574412 KDM5CP41229 1560 aa31.72■■■□□ 2.67
CXCL16-203ENST00000574412 INO80Q9ULG1 1556 aaPredicted RBP31.71■■■□□ 2.67
CXCL16-203ENST00000574412 COL17A1Q9UMD9 1497 aaPredicted RBP31.7■■■□□ 2.66
CXCL16-203ENST00000574412 ATP7AQ04656 1500 aa31.69■■■□□ 2.66
CXCL16-203ENST00000574412 SETD5Q9C0A6 1442 aa31.69■■■□□ 2.66
CXCL16-203ENST00000574412 KIDINS220Q9ULH0 1771 aa31.67■■■□□ 2.66
CXCL16-203ENST00000574412 HECW2Q9P2P5 1572 aa31.67■■■□□ 2.66
CXCL16-203ENST00000574412 PLXNC1O60486 1568 aa31.66■■■□□ 2.66
CXCL16-203ENST00000574412 KDM6BO15054 1643 aa31.66■■■□□ 2.66
CXCL16-203ENST00000574412 RAB3GAP2Q9H2M9 1393 aa31.66■■■□□ 2.66
CXCL16-203ENST00000574412 KIF15Q9NS87 1388 aa31.66■■■□□ 2.66
CXCL16-203ENST00000574412 RTEL1-TNFRSF6BF6WH68 1400 aa31.64■■■□□ 2.65
CXCL16-203ENST00000574412 MLH3Q9UHC1 1453 aa31.6■■■□□ 2.65
CXCL16-203ENST00000574412 ZMYM4Q5VZL5 1548 aa31.57■■■□□ 2.64
CXCL16-203ENST00000574412 ABCA6Q8N139 1617 aa31.57■■■□□ 2.64
CXCL16-203ENST00000574412 ANKRD50Q9ULJ7 1429 aa31.55■■■□□ 2.64
CXCL16-203ENST00000574412 YEATS2Q9ULM3 1422 aa31.53■■■□□ 2.64
CXCL16-203ENST00000574412 DUOX2Q9NRD8 1548 aa31.53■■■□□ 2.64
CXCL16-203ENST00000574412 DIP2CQ9Y2E4 1556 aa31.51■■■□□ 2.63
CXCL16-203ENST00000574412 HRCP23327 699 aa31.48■■■□□ 2.63
CXCL16-203ENST00000574412 MAGI2Q86UL8 1455 aa31.44■■■□□ 2.62
CXCL16-203ENST00000574412 A2MP01023 1474 aa31.44■■■□□ 2.62
CXCL16-203ENST00000574412 ERBINQ96RT1 1412 aa31.43■■■□□ 2.62
CXCL16-203ENST00000574412 TRIM52Q96A61 297 aa31.41■■■□□ 2.62
CXCL16-203ENST00000574412 DHX29Q7Z478 1369 aaKnown RBP31.41■■■□□ 2.62
CXCL16-203ENST00000574412 ARHGEF40Q8TER5 1519 aa31.4■■■□□ 2.62
CXCL16-203ENST00000574412 CCER1Q8TC90 406 aaPredicted RBP31.35■■■□□ 2.61
CXCL16-203ENST00000574412 EIF2AK4Q9P2K8 1649 aaKnown RBP31.35■■■□□ 2.61
CXCL16-203ENST00000574412 ATP10AO60312 1499 aa31.35■■■□□ 2.61
CXCL16-203ENST00000574412 KIF3BO15066 747 aa31.34■■■□□ 2.61
CXCL16-203ENST00000574412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.32■■■□□ 2.6
CXCL16-203ENST00000574412 UNC13BO14795 1591 aa31.32■■■□□ 2.6
CXCL16-203ENST00000574412 SIGLEC1Q9BZZ2 1709 aa31.32■■■□□ 2.6
CXCL16-203ENST00000574412 DHX57Q6P158 1386 aaKnown RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms