RNA–Protein interactions for RNA: ENST00000574132.5

RAB40B-209, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-209ENST00000574132 YEATS2Q9ULM3 1422 aa25.03■■□□□ 1.6
RAB40B-209ENST00000574132 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
RAB40B-209ENST00000574132 RIMS1Q86UR5 1692 aaKnown RBP25.02■■□□□ 1.6
RAB40B-209ENST00000574132 MAGI2Q86UL8 1455 aa25.01■■□□□ 1.59
RAB40B-209ENST00000574132 CLIP1P30622 1438 aa24.97■■□□□ 1.59
RAB40B-209ENST00000574132 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
RAB40B-209ENST00000574132 MYO5CQ9NQX4 1742 aa24.97■■□□□ 1.59
RAB40B-209ENST00000574132 PCF11O94913 1555 aaKnown RBP24.97■■□□□ 1.59
RAB40B-209ENST00000574132 KIF14Q15058 1648 aa24.95■■□□□ 1.58
RAB40B-209ENST00000574132 TROQ12816 1431 aaPredicted RBP24.95■■□□□ 1.58
RAB40B-209ENST00000574132 LMTK3Q96Q04 1460 aa24.93■■□□□ 1.58
RAB40B-209ENST00000574132 ARHGAP5Q13017 1502 aa24.92■■□□□ 1.58
RAB40B-209ENST00000574132 ATP10AO60312 1499 aa24.89■■□□□ 1.58
RAB40B-209ENST00000574132 HSPA2P54652 639 aa24.89■■□□□ 1.58
RAB40B-209ENST00000574132 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
RAB40B-209ENST00000574132 FBXO41Q8TF61 875 aa24.88■■□□□ 1.57
RAB40B-209ENST00000574132 SIGLEC1Q9BZZ2 1709 aa24.88■■□□□ 1.57
RAB40B-209ENST00000574132 ZNF518AQ6AHZ1 1483 aa24.86■■□□□ 1.57
RAB40B-209ENST00000574132 AFAP1Q8N556 730 aa24.86■■□□□ 1.57
RAB40B-209ENST00000574132 FER1L4A9Z1Z3 1794 aa24.85■■□□□ 1.57
RAB40B-209ENST00000574132 CCDC18Q5T9S5 1454 aa24.82■■□□□ 1.56
RAB40B-209ENST00000574132 LRRIQ1Q96JM4 1722 aa24.81■■□□□ 1.56
RAB40B-209ENST00000574132 CASKIN1Q8WXD9 1431 aa24.81■■□□□ 1.56
RAB40B-209ENST00000574132 ARHGEF12Q9NZN5 1544 aa24.77■■□□□ 1.56
RAB40B-209ENST00000574132 CEBPAP49715 358 aaPredicted RBP24.77■■□□□ 1.56
RAB40B-209ENST00000574132 KDM5CP41229 1560 aa24.76■■□□□ 1.55
RAB40B-209ENST00000574132 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
RAB40B-209ENST00000574132 ESF1Q9H501 851 aaKnown RBP24.73■■□□□ 1.55
RAB40B-209ENST00000574132 ZNF777Q9ULD5 760 aaPredicted RBP24.73■■□□□ 1.55
RAB40B-209ENST00000574132 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
RAB40B-209ENST00000574132 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.55
RAB40B-209ENST00000574132 TRAPPC8Q9Y2L5 1435 aa24.7■■□□□ 1.55
RAB40B-209ENST00000574132 DIP2CQ9Y2E4 1556 aa24.7■■□□□ 1.54
RAB40B-209ENST00000574132 MLH3Q9UHC1 1453 aa24.7■■□□□ 1.54
RAB40B-209ENST00000574132 ABCC1P33527 1531 aa24.69■■□□□ 1.54
RAB40B-209ENST00000574132 ABCA6Q8N139 1617 aa24.65■■□□□ 1.54
RAB40B-209ENST00000574132 PREX1Q8TCU6 1659 aa24.65■■□□□ 1.54
RAB40B-209ENST00000574132 ITSN2Q9NZM3 1697 aa24.65■■□□□ 1.54
RAB40B-209ENST00000574132 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
RAB40B-209ENST00000574132 UHRF1BP1Q6BDS2 1440 aa24.63■■□□□ 1.53
RAB40B-209ENST00000574132 CDC42BPAQ5VT25 1732 aa24.63■■□□□ 1.53
RAB40B-209ENST00000574132 CERKQ8TCT0 537 aa24.61■■□□□ 1.53
RAB40B-209ENST00000574132 CFDP1Q9UEE9 299 aaPredicted RBP24.59■■□□□ 1.53
RAB40B-209ENST00000574132 SPAG9O60271 1321 aaKnown RBP24.59■■□□□ 1.53
RAB40B-209ENST00000574132 SETD1BQ9UPS6 1966 aaKnown RBP24.58■■□□□ 1.53
RAB40B-209ENST00000574132 AGLP35573 1532 aa24.58■■□□□ 1.53
RAB40B-209ENST00000574132 HNRNPMP52272 730 aaKnown RBP eCLIP24.58■■□□□ 1.53
RAB40B-209ENST00000574132 DMRT2Q9Y5R5 561 aa24.58■■□□□ 1.53
RAB40B-209ENST00000574132 GPATCH8Q9UKJ3 1502 aaKnown RBP24.57■■□□□ 1.52
RAB40B-209ENST00000574132 MTUS2Q5JR59 1369 aa24.56■■□□□ 1.52
RAB40B-209ENST00000574132 CCNB3Q8WWL7 1395 aa24.56■■□□□ 1.52
RAB40B-209ENST00000574132 KIDINS220Q9ULH0 1771 aa24.56■■□□□ 1.52
RAB40B-209ENST00000574132 SYCP2Q9BX26 1530 aa24.56■■□□□ 1.52
RAB40B-209ENST00000574132 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
RAB40B-209ENST00000574132 C3P01024 1663 aa24.53■■□□□ 1.52
RAB40B-209ENST00000574132 CNTLNQ9NXG0 1405 aa24.52■■□□□ 1.52
RAB40B-209ENST00000574132 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
RAB40B-209ENST00000574132 KIAA1107Q9UPP5 1409 aa24.47■■□□□ 1.51
RAB40B-209ENST00000574132 ATP7AQ04656 1500 aa24.45■■□□□ 1.51
RAB40B-209ENST00000574132 STRCQ7RTU9 1775 aa24.45■■□□□ 1.5
RAB40B-209ENST00000574132 SUPT6HQ7KZ85 1726 aaKnown RBP24.45■■□□□ 1.5
RAB40B-209ENST00000574132 GGT6Q6P531 493 aa24.43■■□□□ 1.5
RAB40B-209ENST00000574132 ZMYM3Q14202 1370 aa24.42■■□□□ 1.5
RAB40B-209ENST00000574132 A2MP01023 1474 aa24.42■■□□□ 1.5
RAB40B-209ENST00000574132 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
RAB40B-209ENST00000574132 PTPRTO14522 1441 aa24.39■■□□□ 1.5
RAB40B-209ENST00000574132 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.49
RAB40B-209ENST00000574132 INO80Q9ULG1 1556 aaPredicted RBP24.38■■□□□ 1.49
RAB40B-209ENST00000574132 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
RAB40B-209ENST00000574132 NPATQ14207 1427 aa24.37■■□□□ 1.49
RAB40B-209ENST00000574132 MROH2AA6NES4 1674 aa24.37■■□□□ 1.49
RAB40B-209ENST00000574132 TIAM1Q13009 1591 aa24.36■■□□□ 1.49
RAB40B-209ENST00000574132 CLTCQ00610 1675 aaKnown RBP24.34■■□□□ 1.49
RAB40B-209ENST00000574132 NCOA1Q15788 1441 aa24.34■■□□□ 1.49
RAB40B-209ENST00000574132 PLXNC1O60486 1568 aa24.33■■□□□ 1.49
RAB40B-209ENST00000574132 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
RAB40B-209ENST00000574132 PPP6R1Q9UPN7 881 aa24.3■■□□□ 1.48
RAB40B-209ENST00000574132 ADGBQ8N7X0 1667 aa24.3■■□□□ 1.48
RAB40B-209ENST00000574132 MBD5Q9P267 1494 aa24.29■■□□□ 1.48
RAB40B-209ENST00000574132 NCKAP5LQ9HCH0 1330 aa24.29■■□□□ 1.48
RAB40B-209ENST00000574132 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
RAB40B-209ENST00000574132 PTPRKQ15262 1439 aa24.26■■□□□ 1.47
RAB40B-209ENST00000574132 NCOA2Q15596 1464 aa24.25■■□□□ 1.47
RAB40B-209ENST00000574132 KIF3BO15066 747 aa24.24■■□□□ 1.47
RAB40B-209ENST00000574132 DHX29Q7Z478 1369 aaKnown RBP24.24■■□□□ 1.47
RAB40B-209ENST00000574132 RSPH4AQ5TD94 716 aa24.23■■□□□ 1.47
RAB40B-209ENST00000574132 CCDC141Q6ZP82 1450 aa24.23■■□□□ 1.47
RAB40B-209ENST00000574132 MYO3AQ8NEV4 1616 aa24.23■■□□□ 1.47
RAB40B-209ENST00000574132 CAMSAP2Q08AD1 1489 aa24.22■■□□□ 1.47
RAB40B-209ENST00000574132 PKD2Q13563 968 aa24.22■■□□□ 1.47
RAB40B-209ENST00000574132 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
RAB40B-209ENST00000574132 CEP170BQ9Y4F5 1589 aaPredicted RBP24.2■■□□□ 1.47
RAB40B-209ENST00000574132 TSPY4P0CV99 314 aa24.19■■□□□ 1.46
RAB40B-209ENST00000574132 TSPY10P0CW01 314 aa24.19■■□□□ 1.46
RAB40B-209ENST00000574132 ZNF142P52746 1687 aaPredicted RBP24.18■■□□□ 1.46
RAB40B-209ENST00000574132 ZNF335Q9H4Z2 1342 aaPredicted RBP24.17■■□□□ 1.46
RAB40B-209ENST00000574132 WASHC2CQ9Y4E1 1318 aa24.17■■□□□ 1.46
RAB40B-209ENST00000574132 PLA2R1Q13018 1463 aa24.17■■□□□ 1.46
RAB40B-209ENST00000574132 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
RAB40B-209ENST00000574132 LOC105371045A0A1W2PR82 267 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms