RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 AKNAQ7Z591 1439 aa19.98■□□□□ 0.79
TRAPPC1-206ENST00000573989 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
TRAPPC1-206ENST00000573989 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
TRAPPC1-206ENST00000573989 ITSN2Q9NZM3 1697 aa19.95■□□□□ 0.78
TRAPPC1-206ENST00000573989 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC1-206ENST00000573989 ADGRL1O94910 1474 aa19.93■□□□□ 0.78
TRAPPC1-206ENST00000573989 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
TRAPPC1-206ENST00000573989 GPATCH8Q9UKJ3 1502 aaKnown RBP19.92■□□□□ 0.78
TRAPPC1-206ENST00000573989 DENND4BO75064 1496 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC1-206ENST00000573989 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC1-206ENST00000573989 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC1-206ENST00000573989 SCAPERQ9BY12 1400 aa19.89■□□□□ 0.77
TRAPPC1-206ENST00000573989 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
TRAPPC1-206ENST00000573989 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC1-206ENST00000573989 RICTORQ6R327 1708 aa19.87■□□□□ 0.77
TRAPPC1-206ENST00000573989 PLEKHH2Q8IVE3 1493 aa19.86■□□□□ 0.77
TRAPPC1-206ENST00000573989 ABCC1P33527 1531 aa19.83■□□□□ 0.77
TRAPPC1-206ENST00000573989 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.76
TRAPPC1-206ENST00000573989 POGZQ7Z3K3 1410 aa19.83■□□□□ 0.76
TRAPPC1-206ENST00000573989 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.76
TRAPPC1-206ENST00000573989 SAMD9LQ8IVG5 1584 aa19.83■□□□□ 0.76
TRAPPC1-206ENST00000573989 KIAA1107Q9UPP5 1409 aa19.8■□□□□ 0.76
TRAPPC1-206ENST00000573989 ZMYM4Q5VZL5 1548 aa19.8■□□□□ 0.76
TRAPPC1-206ENST00000573989 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
TRAPPC1-206ENST00000573989 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
TRAPPC1-206ENST00000573989 MIA2Q96PC5 1412 aa19.77■□□□□ 0.76
TRAPPC1-206ENST00000573989 SYCP2Q9BX26 1530 aa19.77■□□□□ 0.76
TRAPPC1-206ENST00000573989 KDM5CP41229 1560 aa19.76■□□□□ 0.75
TRAPPC1-206ENST00000573989 MYT1LQ9UL68 1186 aa19.76■□□□□ 0.75
TRAPPC1-206ENST00000573989 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
TRAPPC1-206ENST00000573989 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
TRAPPC1-206ENST00000573989 CAMSAP2Q08AD1 1489 aa19.74■□□□□ 0.75
TRAPPC1-206ENST00000573989 HNRNPMP52272 730 aaKnown RBP eCLIP19.74■□□□□ 0.75
TRAPPC1-206ENST00000573989 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
TRAPPC1-206ENST00000573989 HECW2Q9P2P5 1572 aa19.74■□□□□ 0.75
TRAPPC1-206ENST00000573989 ARHGEF40Q8TER5 1519 aa19.73■□□□□ 0.75
TRAPPC1-206ENST00000573989 RSPH4AQ5TD94 716 aa19.73■□□□□ 0.75
TRAPPC1-206ENST00000573989 TRAPPC8Q9Y2L5 1435 aa19.73■□□□□ 0.75
TRAPPC1-206ENST00000573989 ZNF644Q9H582 1327 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC1-206ENST00000573989 MLH3Q9UHC1 1453 aa19.7■□□□□ 0.74
TRAPPC1-206ENST00000573989 SPAG9O60271 1321 aaKnown RBP19.69■□□□□ 0.74
TRAPPC1-206ENST00000573989 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
TRAPPC1-206ENST00000573989 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
TRAPPC1-206ENST00000573989 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
TRAPPC1-206ENST00000573989 ARHGEF5Q12774 1597 aa19.67■□□□□ 0.74
TRAPPC1-206ENST00000573989 YEATS2Q9ULM3 1422 aa19.67■□□□□ 0.74
TRAPPC1-206ENST00000573989 CCDC141Q6ZP82 1450 aa19.67■□□□□ 0.74
TRAPPC1-206ENST00000573989 ATP10AO60312 1499 aa19.66■□□□□ 0.74
TRAPPC1-206ENST00000573989 KIDINS220Q9ULH0 1771 aa19.65■□□□□ 0.74
TRAPPC1-206ENST00000573989 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
TRAPPC1-206ENST00000573989 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
TRAPPC1-206ENST00000573989 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
TRAPPC1-206ENST00000573989 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC1-206ENST00000573989 ATP7AQ04656 1500 aa19.64■□□□□ 0.73
TRAPPC1-206ENST00000573989 C9orf84Q5VXU9 1444 aa19.63■□□□□ 0.73
TRAPPC1-206ENST00000573989 INO80Q9ULG1 1556 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC1-206ENST00000573989 TCOF1Q13428 1488 aaKnown RBP19.62■□□□□ 0.73
TRAPPC1-206ENST00000573989 RTEL1-TNFRSF6BF6WH68 1400 aa19.62■□□□□ 0.73
TRAPPC1-206ENST00000573989 ABCA6Q8N139 1617 aa19.62■□□□□ 0.73
TRAPPC1-206ENST00000573989 DIP2CQ9Y2E4 1556 aa19.61■□□□□ 0.73
TRAPPC1-206ENST00000573989 REREQ9P2R6 1566 aa19.59■□□□□ 0.73
TRAPPC1-206ENST00000573989 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
TRAPPC1-206ENST00000573989 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
TRAPPC1-206ENST00000573989 DNMT1P26358 1616 aaKnown RBP19.57■□□□□ 0.72
TRAPPC1-206ENST00000573989 MAST1Q9Y2H9 1570 aa19.56■□□□□ 0.72
TRAPPC1-206ENST00000573989 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
TRAPPC1-206ENST00000573989 BCORL1Q5H9F3 1711 aa19.54■□□□□ 0.72
TRAPPC1-206ENST00000573989 SHANK2Q9UPX8 1470 aa19.54■□□□□ 0.72
TRAPPC1-206ENST00000573989 DAPK1P53355 1430 aa19.53■□□□□ 0.72
TRAPPC1-206ENST00000573989 AGLP35573 1532 aa19.52■□□□□ 0.72
TRAPPC1-206ENST00000573989 A2MP01023 1474 aa19.52■□□□□ 0.72
TRAPPC1-206ENST00000573989 ABCC5O15440 1437 aa19.51■□□□□ 0.71
TRAPPC1-206ENST00000573989 SIGLEC1Q9BZZ2 1709 aa19.51■□□□□ 0.71
TRAPPC1-206ENST00000573989 KDM4FA0A1W2PPD8 638 aa19.51■□□□□ 0.71
TRAPPC1-206ENST00000573989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRAPPC1-206ENST00000573989 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC1-206ENST00000573989 PLXNC1O60486 1568 aa19.49■□□□□ 0.71
TRAPPC1-206ENST00000573989 ADAMTSL3P82987 1691 aa19.49■□□□□ 0.71
TRAPPC1-206ENST00000573989 MLECQ14165 292 aa19.48■□□□□ 0.71
TRAPPC1-206ENST00000573989 DHX29Q7Z478 1369 aaKnown RBP19.47■□□□□ 0.71
TRAPPC1-206ENST00000573989 RRBP1Q9P2E9 1410 aaKnown RBP19.47■□□□□ 0.71
TRAPPC1-206ENST00000573989 ANKRD30AQ9BXX3 1397 aa19.45■□□□□ 0.7
TRAPPC1-206ENST00000573989 FER1L4A9Z1Z3 1794 aa19.45■□□□□ 0.7
TRAPPC1-206ENST00000573989 MADDQ8WXG6 1647 aa19.44■□□□□ 0.7
TRAPPC1-206ENST00000573989 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
TRAPPC1-206ENST00000573989 CHIC2Q9UKJ5 165 aa19.44■□□□□ 0.7
TRAPPC1-206ENST00000573989 DUOX2Q9NRD8 1548 aa19.43■□□□□ 0.7
TRAPPC1-206ENST00000573989 KIF15Q9NS87 1388 aa19.42■□□□□ 0.7
TRAPPC1-206ENST00000573989 RIMS1Q86UR5 1692 aaKnown RBP19.41■□□□□ 0.7
TRAPPC1-206ENST00000573989 ADGRL2O95490 1459 aa19.41■□□□□ 0.7
TRAPPC1-206ENST00000573989 EIF2AK4Q9P2K8 1649 aaKnown RBP19.4■□□□□ 0.7
TRAPPC1-206ENST00000573989 RRP7BPQ9NSQ0 103 aa19.4■□□□□ 0.7
TRAPPC1-206ENST00000573989 KIF3BO15066 747 aa19.39■□□□□ 0.69
TRAPPC1-206ENST00000573989 ITGAEP38570 1179 aa19.39■□□□□ 0.69
TRAPPC1-206ENST00000573989 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
TRAPPC1-206ENST00000573989 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
TRAPPC1-206ENST00000573989 GGT6Q6P531 493 aa19.38■□□□□ 0.69
TRAPPC1-206ENST00000573989 ERBINQ96RT1 1412 aa19.37■□□□□ 0.69
TRAPPC1-206ENST00000573989 PTPRMP28827 1452 aa19.36■□□□□ 0.69
TRAPPC1-206ENST00000573989 CNTLNQ9NXG0 1405 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms