RNA–Protein interactions for RNA: ENST00000573377.1

ITGB3-203, Transcript of integrin subunit beta 3, humanhuman

TSL 1 (best)

Gene ITGB3, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-203ENST00000573377 KIF14Q15058 1648 aa21.78■■□□□ 1.08
ITGB3-203ENST00000573377 TROQ12816 1431 aaPredicted RBP21.78■■□□□ 1.08
ITGB3-203ENST00000573377 YEATS2Q9ULM3 1422 aa21.78■■□□□ 1.08
ITGB3-203ENST00000573377 RIMS1Q86UR5 1692 aaKnown RBP21.78■■□□□ 1.08
ITGB3-203ENST00000573377 LMTK3Q96Q04 1460 aa21.77■■□□□ 1.07
ITGB3-203ENST00000573377 CLIP1P30622 1438 aa21.76■■□□□ 1.07
ITGB3-203ENST00000573377 ATP10AO60312 1499 aa21.73■■□□□ 1.07
ITGB3-203ENST00000573377 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
ITGB3-203ENST00000573377 ZNF518AQ6AHZ1 1483 aa21.72■■□□□ 1.07
ITGB3-203ENST00000573377 SIGLEC1Q9BZZ2 1709 aa21.72■■□□□ 1.07
ITGB3-203ENST00000573377 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
ITGB3-203ENST00000573377 CCDC18Q5T9S5 1454 aa21.7■■□□□ 1.06
ITGB3-203ENST00000573377 KDM5CP41229 1560 aa21.7■■□□□ 1.06
ITGB3-203ENST00000573377 FBXO41Q8TF61 875 aa21.69■■□□□ 1.06
ITGB3-203ENST00000573377 FER1L4A9Z1Z3 1794 aa21.69■■□□□ 1.06
ITGB3-203ENST00000573377 ARHGAP5Q13017 1502 aa21.68■■□□□ 1.06
ITGB3-203ENST00000573377 ARHGEF12Q9NZN5 1544 aa21.68■■□□□ 1.06
ITGB3-203ENST00000573377 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
ITGB3-203ENST00000573377 CASKIN1Q8WXD9 1431 aa21.67■■□□□ 1.06
ITGB3-203ENST00000573377 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
ITGB3-203ENST00000573377 REREQ9P2R6 1566 aa21.65■■□□□ 1.06
ITGB3-203ENST00000573377 CDC42BPBQ9Y5S2 1711 aa21.62■■□□□ 1.05
ITGB3-203ENST00000573377 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
ITGB3-203ENST00000573377 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
ITGB3-203ENST00000573377 FYCO1Q9BQS8 1478 aa21.59■■□□□ 1.05
ITGB3-203ENST00000573377 MLECQ14165 292 aa21.59■■□□□ 1.05
ITGB3-203ENST00000573377 AFAP1Q8N556 730 aa21.58■■□□□ 1.05
ITGB3-203ENST00000573377 ABCC1P33527 1531 aa21.58■■□□□ 1.04
ITGB3-203ENST00000573377 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
ITGB3-203ENST00000573377 AGLP35573 1532 aa21.56■■□□□ 1.04
ITGB3-203ENST00000573377 PREX1Q8TCU6 1659 aa21.56■■□□□ 1.04
ITGB3-203ENST00000573377 HSPA2P54652 639 aa21.54■■□□□ 1.04
ITGB3-203ENST00000573377 SETD1BQ9UPS6 1966 aaKnown RBP21.54■■□□□ 1.04
ITGB3-203ENST00000573377 ITSN2Q9NZM3 1697 aa21.53■■□□□ 1.04
ITGB3-203ENST00000573377 ABCA6Q8N139 1617 aa21.52■■□□□ 1.04
ITGB3-203ENST00000573377 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.03
ITGB3-203ENST00000573377 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
ITGB3-203ENST00000573377 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
ITGB3-203ENST00000573377 MYT1LQ9UL68 1186 aa21.5■■□□□ 1.03
ITGB3-203ENST00000573377 UHRF1BP1Q6BDS2 1440 aa21.47■■□□□ 1.03
ITGB3-203ENST00000573377 KIDINS220Q9ULH0 1771 aa21.47■■□□□ 1.03
ITGB3-203ENST00000573377 DMRT2Q9Y5R5 561 aa21.45■■□□□ 1.02
ITGB3-203ENST00000573377 CNTLNQ9NXG0 1405 aa21.45■■□□□ 1.02
ITGB3-203ENST00000573377 KIAA1107Q9UPP5 1409 aa21.44■■□□□ 1.02
ITGB3-203ENST00000573377 PLEKHH2Q8IVE3 1493 aa21.44■■□□□ 1.02
ITGB3-203ENST00000573377 CEBPAP49715 358 aaPredicted RBP21.43■■□□□ 1.02
ITGB3-203ENST00000573377 GPATCH8Q9UKJ3 1502 aaKnown RBP21.43■■□□□ 1.02
ITGB3-203ENST00000573377 C3P01024 1663 aa21.42■■□□□ 1.02
ITGB3-203ENST00000573377 SAMD9LQ8IVG5 1584 aa21.42■■□□□ 1.02
ITGB3-203ENST00000573377 ESF1Q9H501 851 aaKnown RBP21.42■■□□□ 1.02
ITGB3-203ENST00000573377 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
ITGB3-203ENST00000573377 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.01
ITGB3-203ENST00000573377 STRCQ7RTU9 1775 aa21.38■■□□□ 1.01
ITGB3-203ENST00000573377 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
ITGB3-203ENST00000573377 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
ITGB3-203ENST00000573377 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
ITGB3-203ENST00000573377 CFDP1Q9UEE9 299 aaPredicted RBP21.35■■□□□ 1.01
ITGB3-203ENST00000573377 NPATQ14207 1427 aa21.35■■□□□ 1.01
ITGB3-203ENST00000573377 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
ITGB3-203ENST00000573377 PTPRTO14522 1441 aa21.34■■□□□ 1.01
ITGB3-203ENST00000573377 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
ITGB3-203ENST00000573377 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
ITGB3-203ENST00000573377 INO80Q9ULG1 1556 aaPredicted RBP21.33■■□□□ 1.01
ITGB3-203ENST00000573377 PLXNC1O60486 1568 aa21.32■■□□□ 1
ITGB3-203ENST00000573377 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 1
ITGB3-203ENST00000573377 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
ITGB3-203ENST00000573377 EHBP1L1Q8N3D4 1523 aa21.29■■□□□ 1
ITGB3-203ENST00000573377 A2MP01023 1474 aa21.29■■□□□ 1
ITGB3-203ENST00000573377 SUPT6HQ7KZ85 1726 aaKnown RBP21.27■■□□□ 1
ITGB3-203ENST00000573377 ZMYM3Q14202 1370 aa21.27■■□□□ 1
ITGB3-203ENST00000573377 CEP162Q5TB80 1403 aa21.27■■□□□ 1
ITGB3-203ENST00000573377 ADGBQ8N7X0 1667 aa21.26■□□□□ 0.99
ITGB3-203ENST00000573377 NCOA1Q15788 1441 aa21.26■□□□□ 0.99
ITGB3-203ENST00000573377 TIAM1Q13009 1591 aa21.26■□□□□ 0.99
ITGB3-203ENST00000573377 RTEL1-TNFRSF6BF6WH68 1400 aa21.25■□□□□ 0.99
ITGB3-203ENST00000573377 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
ITGB3-203ENST00000573377 IQSEC2Q5JU85 1478 aa21.22■□□□□ 0.99
ITGB3-203ENST00000573377 ZNF142P52746 1687 aaPredicted RBP21.2■□□□□ 0.98
ITGB3-203ENST00000573377 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
ITGB3-203ENST00000573377 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
ITGB3-203ENST00000573377 CAMSAP1Q5T5Y3 1602 aa21.18■□□□□ 0.98
ITGB3-203ENST00000573377 PLA2R1Q13018 1463 aa21.18■□□□□ 0.98
ITGB3-203ENST00000573377 FAM135AQ9P2D6 1515 aa21.18■□□□□ 0.98
ITGB3-203ENST00000573377 PTPRKQ15262 1439 aa21.17■□□□□ 0.98
ITGB3-203ENST00000573377 LTBP4Q8N2S1 1624 aa21.17■□□□□ 0.98
ITGB3-203ENST00000573377 MYO3AQ8NEV4 1616 aa21.16■□□□□ 0.98
ITGB3-203ENST00000573377 DHX29Q7Z478 1369 aaKnown RBP21.16■□□□□ 0.98
ITGB3-203ENST00000573377 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
ITGB3-203ENST00000573377 GGT6Q6P531 493 aa21.15■□□□□ 0.98
ITGB3-203ENST00000573377 PKD2Q13563 968 aa21.14■□□□□ 0.97
ITGB3-203ENST00000573377 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
ITGB3-203ENST00000573377 CEP170BQ9Y4F5 1589 aaPredicted RBP21.13■□□□□ 0.97
ITGB3-203ENST00000573377 NCOA2Q15596 1464 aa21.12■□□□□ 0.97
ITGB3-203ENST00000573377 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
ITGB3-203ENST00000573377 CAMSAP2Q08AD1 1489 aa21.09■□□□□ 0.97
ITGB3-203ENST00000573377 ARHGEF5Q12774 1597 aa21.09■□□□□ 0.97
ITGB3-203ENST00000573377 A2ML1A8K2U0 1454 aa21.07■□□□□ 0.96
ITGB3-203ENST00000573377 KDM5DQ9BY66 1539 aa21.05■□□□□ 0.96
ITGB3-203ENST00000573377 PZPP20742 1482 aa21.04■□□□□ 0.96
ITGB3-203ENST00000573377 MAP3K1Q13233 1512 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms