RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
NCBP3-202ENST00000572988 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
NCBP3-202ENST00000572988 TMEM121BQ9BXQ6 578 aaPredicted RBP9.79□□□□□ -0.84
NCBP3-202ENST00000572988 ILDR1Q86SU0 546 aaPredicted RBP9.78□□□□□ -0.84
NCBP3-202ENST00000572988 MS4A4AQ96JQ5 239 aa9.78□□□□□ -0.84
NCBP3-202ENST00000572988 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
NCBP3-202ENST00000572988 MYO15BQ96JP2 1530 aa9.74□□□□□ -0.85
NCBP3-202ENST00000572988 BOLA1Q9Y3E2 137 aa9.74□□□□□ -0.85
NCBP3-202ENST00000572988 POTEB3A0JP26 581 aa9.72□□□□□ -0.85
NCBP3-202ENST00000572988 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
NCBP3-202ENST00000572988 POTEBQ6S5H4 581 aa9.72□□□□□ -0.85
NCBP3-202ENST00000572988 PAXIP1Q6ZW49 1069 aaPredicted RBP9.72□□□□□ -0.85
NCBP3-202ENST00000572988 SPNS2Q8IVW8 549 aa9.72□□□□□ -0.85
NCBP3-202ENST00000572988 SPRYD3Q8NCJ5 442 aa9.72□□□□□ -0.85
NCBP3-202ENST00000572988 CFAP44Q96MT7 982 aa9.72□□□□□ -0.85
NCBP3-202ENST00000572988 PPP1R37O75864 691 aa9.71□□□□□ -0.86
NCBP3-202ENST00000572988 MMRN1Q13201 1228 aa9.7□□□□□ -0.86
NCBP3-202ENST00000572988 EMP3P54852 163 aa9.69□□□□□ -0.86
NCBP3-202ENST00000572988 BICRAQ9NZM4 1560 aa9.68□□□□□ -0.86
NCBP3-202ENST00000572988 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
NCBP3-202ENST00000572988 MICALL2Q8IY33 904 aa9.68□□□□□ -0.86
NCBP3-202ENST00000572988 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
NCBP3-202ENST00000572988 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.86
NCBP3-202ENST00000572988 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-202ENST00000572988 DCAF1Q9Y4B6 1507 aa9.63□□□□□ -0.87
NCBP3-202ENST00000572988 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
NCBP3-202ENST00000572988 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
NCBP3-202ENST00000572988 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
NCBP3-202ENST00000572988 TMC2Q8TDI7 906 aa9.56□□□□□ -0.88
NCBP3-202ENST00000572988 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
NCBP3-202ENST00000572988 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
NCBP3-202ENST00000572988 ZNF710Q8N1W2 664 aa9.55□□□□□ -0.88
NCBP3-202ENST00000572988 SCRIBQ14160 1630 aa9.54□□□□□ -0.88
NCBP3-202ENST00000572988 HOXB1P14653 301 aaPredicted RBP9.54□□□□□ -0.88
NCBP3-202ENST00000572988 C2orf72A6NCS6 295 aa9.52□□□□□ -0.89
NCBP3-202ENST00000572988 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
NCBP3-202ENST00000572988 PDE4AP27815 886 aa9.51□□□□□ -0.89
NCBP3-202ENST00000572988 ERBB3P21860 1342 aa9.51□□□□□ -0.89
NCBP3-202ENST00000572988 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
NCBP3-202ENST00000572988 CECR2Q9BXF3 1484 aa9.48□□□□□ -0.89
NCBP3-202ENST00000572988 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
NCBP3-202ENST00000572988 LARP6Q9BRS8 491 aaKnown RBP9.48□□□□□ -0.89
NCBP3-202ENST00000572988 GPHNQ9NQX3 736 aaPredicted RBP9.48□□□□□ -0.89
NCBP3-202ENST00000572988 TSHZ2Q9NRE2 1034 aa9.48□□□□□ -0.89
NCBP3-202ENST00000572988 SHROOM4Q9ULL8 1493 aa9.47□□□□□ -0.89
NCBP3-202ENST00000572988 KIF3CO14782 793 aa9.46□□□□□ -0.9
NCBP3-202ENST00000572988 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
NCBP3-202ENST00000572988 CC2D2AQ9P2K1 1620 aa9.45□□□□□ -0.9
NCBP3-202ENST00000572988 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
NCBP3-202ENST00000572988 NCKAP5LQ9HCH0 1330 aa9.45□□□□□ -0.9
NCBP3-202ENST00000572988 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
NCBP3-202ENST00000572988 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
NCBP3-202ENST00000572988 DSG2Q14126 1118 aa9.43□□□□□ -0.9
NCBP3-202ENST00000572988 GPR153Q6NV75 609 aa9.43□□□□□ -0.9
NCBP3-202ENST00000572988 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
NCBP3-202ENST00000572988 FOXK1P85037 733 aa9.42□□□□□ -0.9
NCBP3-202ENST00000572988 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
NCBP3-202ENST00000572988 PPP1R15BQ5SWA1 713 aa9.41□□□□□ -0.9
NCBP3-202ENST00000572988 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
NCBP3-202ENST00000572988 ARSIQ5FYB1 569 aa9.4□□□□□ -0.9
NCBP3-202ENST00000572988 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.91
NCBP3-202ENST00000572988 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
NCBP3-202ENST00000572988 MFSD10Q14728 455 aa9.37□□□□□ -0.91
NCBP3-202ENST00000572988 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
NCBP3-202ENST00000572988 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
NCBP3-202ENST00000572988 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
NCBP3-202ENST00000572988 TBC1D12O60347 775 aa9.31□□□□□ -0.92
NCBP3-202ENST00000572988 SLC34A2O95436 690 aa9.31□□□□□ -0.92
NCBP3-202ENST00000572988 PCDHGA4Q9Y5G9 962 aa9.31□□□□□ -0.92
NCBP3-202ENST00000572988 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
NCBP3-202ENST00000572988 E2F4Q16254 413 aa9.29□□□□□ -0.92
NCBP3-202ENST00000572988 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
NCBP3-202ENST00000572988 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
NCBP3-202ENST00000572988 MAP3K9P80192 1104 aa9.28□□□□□ -0.92
NCBP3-202ENST00000572988 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
NCBP3-202ENST00000572988 NUDT7P0C024 238 aa9.26□□□□□ -0.93
NCBP3-202ENST00000572988 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
NCBP3-202ENST00000572988 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
NCBP3-202ENST00000572988 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
NCBP3-202ENST00000572988 CAMK2BQ13554 666 aa9.25□□□□□ -0.93
NCBP3-202ENST00000572988 KDM2AQ9Y2K7 1162 aa9.24□□□□□ -0.93
NCBP3-202ENST00000572988 DPYSL4O14531 572 aa9.22□□□□□ -0.93
NCBP3-202ENST00000572988 LHX6Q9UPM6 363 aa9.22□□□□□ -0.93
NCBP3-202ENST00000572988 NCAPD3P42695 1498 aa9.21□□□□□ -0.93
NCBP3-202ENST00000572988 POTEEQ6S8J3 1075 aa9.21□□□□□ -0.94
NCBP3-202ENST00000572988 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
NCBP3-202ENST00000572988 EVI5O60447 810 aa9.2□□□□□ -0.94
NCBP3-202ENST00000572988 LSM11P83369 360 aaKnown RBP eCLIP9.2□□□□□ -0.94
NCBP3-202ENST00000572988 P3H3Q8IVL6 736 aa9.18□□□□□ -0.94
NCBP3-202ENST00000572988 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
NCBP3-202ENST00000572988 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
NCBP3-202ENST00000572988 PTGER2P43116 358 aa9.16□□□□□ -0.94
NCBP3-202ENST00000572988 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
NCBP3-202ENST00000572988 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
NCBP3-202ENST00000572988 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
NCBP3-202ENST00000572988 SPDYE16A6NNV3 312 aaPredicted RBP9.13□□□□□ -0.95
NCBP3-202ENST00000572988 PSDA5PKW4 1024 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-202ENST00000572988 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
NCBP3-202ENST00000572988 ANO8Q9HCE9 1232 aaPredicted RBP9.12□□□□□ -0.95
NCBP3-202ENST00000572988 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms