RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 ERBB3P21860 1342 aa9.85□□□□□ -0.83
TVP23B-205ENST00000572845 FBXO22Q8NEZ5 403 aa9.84□□□□□ -0.83
TVP23B-205ENST00000572845 POTEB3A0JP26 581 aa9.83□□□□□ -0.84
TVP23B-205ENST00000572845 POTEBQ6S5H4 581 aa9.83□□□□□ -0.84
TVP23B-205ENST00000572845 TMEM92Q6UXU6 159 aa9.83□□□□□ -0.84
TVP23B-205ENST00000572845 KRTAP3-3Q9BYR6 98 aa9.81□□□□□ -0.84
TVP23B-205ENST00000572845 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
TVP23B-205ENST00000572845 MFRPQ9BY79 579 aa9.8□□□□□ -0.84
TVP23B-205ENST00000572845 PKD2Q13563 968 aa9.79□□□□□ -0.84
TVP23B-205ENST00000572845 GPR153Q6NV75 609 aa9.78□□□□□ -0.84
TVP23B-205ENST00000572845 VARS2Q5ST30 1063 aaKnown RBP9.76□□□□□ -0.85
TVP23B-205ENST00000572845 RGL2O15211 777 aa9.75□□□□□ -0.85
TVP23B-205ENST00000572845 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
TVP23B-205ENST00000572845 ARSIQ5FYB1 569 aa9.71□□□□□ -0.86
TVP23B-205ENST00000572845 KIF3CO14782 793 aa9.7□□□□□ -0.86
TVP23B-205ENST00000572845 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
TVP23B-205ENST00000572845 TMC2Q8TDI7 906 aa9.69□□□□□ -0.86
TVP23B-205ENST00000572845 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
TVP23B-205ENST00000572845 SLC34A2O95436 690 aa9.67□□□□□ -0.86
TVP23B-205ENST00000572845 PTGER2P43116 358 aa9.66□□□□□ -0.86
TVP23B-205ENST00000572845 HS6ST3Q8IZP7 471 aa9.62□□□□□ -0.87
TVP23B-205ENST00000572845 RNF166Q96A37 237 aaPredicted RBP9.61□□□□□ -0.87
TVP23B-205ENST00000572845 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
TVP23B-205ENST00000572845 PBX2P40425 430 aa9.6□□□□□ -0.87
TVP23B-205ENST00000572845 RYDENQ9NUL5 291 aaKnown RBP9.6□□□□□ -0.87
TVP23B-205ENST00000572845 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
TVP23B-205ENST00000572845 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-205ENST00000572845 PPP1R37O75864 691 aa9.59□□□□□ -0.87
TVP23B-205ENST00000572845 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.87
TVP23B-205ENST00000572845 NUDT7P0C024 238 aa9.58□□□□□ -0.88
TVP23B-205ENST00000572845 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
TVP23B-205ENST00000572845 CHGAP10645 457 aaKnown RBP9.55□□□□□ -0.88
TVP23B-205ENST00000572845 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
TVP23B-205ENST00000572845 FOXK1P85037 733 aa9.55□□□□□ -0.88
TVP23B-205ENST00000572845 LHX6Q9UPM6 363 aa9.55□□□□□ -0.88
TVP23B-205ENST00000572845 TBC1D12O60347 775 aa9.54□□□□□ -0.88
TVP23B-205ENST00000572845 DNAJC5Q9H3Z4 198 aa9.54□□□□□ -0.88
TVP23B-205ENST00000572845 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
TVP23B-205ENST00000572845 PTCD2Q8WV60 388 aaKnown RBP9.53□□□□□ -0.88
TVP23B-205ENST00000572845 PLPP6Q8IY26 295 aa9.5□□□□□ -0.89
TVP23B-205ENST00000572845 ARHGAP33O14559 1287 aa9.48□□□□□ -0.89
TVP23B-205ENST00000572845 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
TVP23B-205ENST00000572845 DSG2Q14126 1118 aa9.45□□□□□ -0.9
TVP23B-205ENST00000572845 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
TVP23B-205ENST00000572845 AXIN2Q9Y2T1 843 aa9.43□□□□□ -0.9
TVP23B-205ENST00000572845 TK2O00142 265 aa9.42□□□□□ -0.9
TVP23B-205ENST00000572845 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
TVP23B-205ENST00000572845 KCNH8Q96L42 1107 aa9.42□□□□□ -0.9
TVP23B-205ENST00000572845 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
TVP23B-205ENST00000572845 PDE4AP27815 886 aa9.4□□□□□ -0.9
TVP23B-205ENST00000572845 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
TVP23B-205ENST00000572845 CRISPLD2Q9H0B8 497 aa9.39□□□□□ -0.91
TVP23B-205ENST00000572845 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
TVP23B-205ENST00000572845 HCSTQ9UBK5 93 aa9.38□□□□□ -0.91
TVP23B-205ENST00000572845 STAC3Q96MF2 364 aa9.37□□□□□ -0.91
TVP23B-205ENST00000572845 PPP1R15BQ5SWA1 713 aa9.36□□□□□ -0.91
TVP23B-205ENST00000572845 HRO43593 1189 aa9.32□□□□□ -0.92
TVP23B-205ENST00000572845 PSEN2P49810 448 aa9.32□□□□□ -0.92
TVP23B-205ENST00000572845 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
TVP23B-205ENST00000572845 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
TVP23B-205ENST00000572845 UPF1Q92900 1129 aaKnown RBP eCLIP9.31□□□□□ -0.92
TVP23B-205ENST00000572845 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
TVP23B-205ENST00000572845 ZNF454Q8N9F8 522 aa9.29□□□□□ -0.92
TVP23B-205ENST00000572845 DDX27Q96GQ7 796 aaKnown RBP9.29□□□□□ -0.92
TVP23B-205ENST00000572845 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
TVP23B-205ENST00000572845 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
TVP23B-205ENST00000572845 BCL2L12Q9HB09 334 aa9.29□□□□□ -0.92
TVP23B-205ENST00000572845 NCKAP5LQ9HCH0 1330 aa9.29□□□□□ -0.92
TVP23B-205ENST00000572845 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
TVP23B-205ENST00000572845 DCAF8L2P0C7V8 631 aa9.27□□□□□ -0.93
TVP23B-205ENST00000572845 PTPREP23469 700 aa9.26□□□□□ -0.93
TVP23B-205ENST00000572845 FOSBP53539 338 aa9.26□□□□□ -0.93
TVP23B-205ENST00000572845 PLA2G2EQ9NZK7 142 aa9.26□□□□□ -0.93
TVP23B-205ENST00000572845 EVI5O60447 810 aa9.25□□□□□ -0.93
TVP23B-205ENST00000572845 MAP3K9P80192 1104 aa9.25□□□□□ -0.93
TVP23B-205ENST00000572845 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
TVP23B-205ENST00000572845 MFSD10Q14728 455 aa9.24□□□□□ -0.93
TVP23B-205ENST00000572845 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
TVP23B-205ENST00000572845 ZDHHC16Q969W1 377 aa9.23□□□□□ -0.93
TVP23B-205ENST00000572845 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
TVP23B-205ENST00000572845 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
TVP23B-205ENST00000572845 BHMG1C9JSJ3 638 aaPredicted RBP9.17□□□□□ -0.94
TVP23B-205ENST00000572845 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
TVP23B-205ENST00000572845 NBPF3Q9H094 633 aa9.17□□□□□ -0.94
TVP23B-205ENST00000572845 MRPL50Q8N5N7 158 aaKnown RBP9.16□□□□□ -0.94
TVP23B-205ENST00000572845 FBXW7Q969H0 707 aa9.16□□□□□ -0.94
TVP23B-205ENST00000572845 ADAM33Q9BZ11 813 aa9.15□□□□□ -0.94
TVP23B-205ENST00000572845 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
TVP23B-205ENST00000572845 PHF14O94880 888 aa9.13□□□□□ -0.95
TVP23B-205ENST00000572845 PTPN5P54829 565 aa9.13□□□□□ -0.95
TVP23B-205ENST00000572845 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
TVP23B-205ENST00000572845 TYW1BQ6NUM6 668 aa9.12□□□□□ -0.95
TVP23B-205ENST00000572845 WNT2BQ93097 391 aa9.12□□□□□ -0.95
TVP23B-205ENST00000572845 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
TVP23B-205ENST00000572845 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
TVP23B-205ENST00000572845 BBXQ8WY36 941 aaPredicted RBP9.11□□□□□ -0.95
TVP23B-205ENST00000572845 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
TVP23B-205ENST00000572845 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
TVP23B-205ENST00000572845 EPAS1Q99814 870 aa9.1□□□□□ -0.95
TVP23B-205ENST00000572845 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms