RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 LRRIQ1Q96JM4 1722 aa27.81■■■□□ 2.04
ATP2A3-212ENST00000572694 KIF14Q15058 1648 aa27.79■■■□□ 2.04
ATP2A3-212ENST00000572694 POGZQ7Z3K3 1410 aa27.79■■■□□ 2.04
ATP2A3-212ENST00000572694 ZFYVE16Q7Z3T8 1539 aa27.78■■■□□ 2.04
ATP2A3-212ENST00000572694 YEATS2Q9ULM3 1422 aa27.77■■■□□ 2.04
ATP2A3-212ENST00000572694 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.03
ATP2A3-212ENST00000572694 MADDQ8WXG6 1647 aa27.74■■■□□ 2.03
ATP2A3-212ENST00000572694 PCF11O94913 1555 aaKnown RBP27.7■■■□□ 2.03
ATP2A3-212ENST00000572694 ARHGAP5Q13017 1502 aa27.7■■■□□ 2.02
ATP2A3-212ENST00000572694 ATP10AO60312 1499 aa27.7■■■□□ 2.02
ATP2A3-212ENST00000572694 ZNF518AQ6AHZ1 1483 aa27.68■■■□□ 2.02
ATP2A3-212ENST00000572694 FYCO1Q9BQS8 1478 aa27.68■■■□□ 2.02
ATP2A3-212ENST00000572694 AFAP1Q8N556 730 aa27.67■■■□□ 2.02
ATP2A3-212ENST00000572694 SIGLEC1Q9BZZ2 1709 aa27.67■■■□□ 2.02
ATP2A3-212ENST00000572694 CDC42BPBQ9Y5S2 1711 aa27.66■■■□□ 2.02
ATP2A3-212ENST00000572694 RIMS1Q86UR5 1692 aaKnown RBP27.64■■■□□ 2.02
ATP2A3-212ENST00000572694 ILDR1Q86SU0 546 aaPredicted RBP27.63■■■□□ 2.01
ATP2A3-212ENST00000572694 C9orf84Q5VXU9 1444 aa27.63■■■□□ 2.01
ATP2A3-212ENST00000572694 KDM5CP41229 1560 aa27.62■■■□□ 2.01
ATP2A3-212ENST00000572694 PREX2Q70Z35 1606 aa27.59■■■□□ 2.01
ATP2A3-212ENST00000572694 MLECQ14165 292 aa27.59■■■□□ 2.01
ATP2A3-212ENST00000572694 MLH3Q9UHC1 1453 aa27.57■■■□□ 2
ATP2A3-212ENST00000572694 LMTK3Q96Q04 1460 aa27.56■■■□□ 2
ATP2A3-212ENST00000572694 ARHGEF12Q9NZN5 1544 aa27.54■■■□□ 2
ATP2A3-212ENST00000572694 CDC42BPAQ5VT25 1732 aa27.53■■■□□ 2
ATP2A3-212ENST00000572694 MYT1LQ9UL68 1186 aa27.53■■■□□ 2
ATP2A3-212ENST00000572694 FER1L4A9Z1Z3 1794 aa27.53■■■□□ 2
ATP2A3-212ENST00000572694 ABCC1P33527 1531 aa27.52■■■□□ 2
ATP2A3-212ENST00000572694 TRAPPC8Q9Y2L5 1435 aa27.52■■■□□ 2
ATP2A3-212ENST00000572694 REREQ9P2R6 1566 aa27.51■■□□□ 1.99
ATP2A3-212ENST00000572694 DIP2CQ9Y2E4 1556 aa27.48■■□□□ 1.99
ATP2A3-212ENST00000572694 GPATCH8Q9UKJ3 1502 aaKnown RBP27.48■■□□□ 1.99
ATP2A3-212ENST00000572694 ITSN2Q9NZM3 1697 aa27.48■■□□□ 1.99
ATP2A3-212ENST00000572694 PLPPR3Q6T4P5 718 aa27.46■■□□□ 1.99
ATP2A3-212ENST00000572694 AGLP35573 1532 aa27.43■■□□□ 1.98
ATP2A3-212ENST00000572694 ZNF777Q9ULD5 760 aaPredicted RBP27.43■■□□□ 1.98
ATP2A3-212ENST00000572694 ABCA6Q8N139 1617 aa27.42■■□□□ 1.98
ATP2A3-212ENST00000572694 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
ATP2A3-212ENST00000572694 CFDP1Q9UEE9 299 aaPredicted RBP27.41■■□□□ 1.98
ATP2A3-212ENST00000572694 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
ATP2A3-212ENST00000572694 KIDINS220Q9ULH0 1771 aa27.4■■□□□ 1.98
ATP2A3-212ENST00000572694 HSPA2P54652 639 aa27.4■■□□□ 1.98
ATP2A3-212ENST00000572694 SETD1BQ9UPS6 1966 aaKnown RBP27.4■■□□□ 1.98
ATP2A3-212ENST00000572694 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.98
ATP2A3-212ENST00000572694 CCNB3Q8WWL7 1395 aa27.39■■□□□ 1.98
ATP2A3-212ENST00000572694 CEBPAP49715 358 aaPredicted RBP27.38■■□□□ 1.97
ATP2A3-212ENST00000572694 HNRNPMP52272 730 aaKnown RBP eCLIP27.38■■□□□ 1.97
ATP2A3-212ENST00000572694 CEP162Q5TB80 1403 aa27.38■■□□□ 1.97
ATP2A3-212ENST00000572694 PLEKHH2Q8IVE3 1493 aa27.38■■□□□ 1.97
ATP2A3-212ENST00000572694 SPAG9O60271 1321 aaKnown RBP27.35■■□□□ 1.97
ATP2A3-212ENST00000572694 SYCP2Q9BX26 1530 aa27.33■■□□□ 1.97
ATP2A3-212ENST00000572694 FBXO41Q8TF61 875 aa27.32■■□□□ 1.96
ATP2A3-212ENST00000572694 ESF1Q9H501 851 aaKnown RBP27.31■■□□□ 1.96
ATP2A3-212ENST00000572694 PREX1Q8TCU6 1659 aa27.3■■□□□ 1.96
ATP2A3-212ENST00000572694 EHBP1L1Q8N3D4 1523 aa27.28■■□□□ 1.96
ATP2A3-212ENST00000572694 CNTLNQ9NXG0 1405 aa27.26■■□□□ 1.95
ATP2A3-212ENST00000572694 TIAM1Q13009 1591 aa27.24■■□□□ 1.95
ATP2A3-212ENST00000572694 ATP7AQ04656 1500 aa27.24■■□□□ 1.95
ATP2A3-212ENST00000572694 UHRF1BP1Q6BDS2 1440 aa27.24■■□□□ 1.95
ATP2A3-212ENST00000572694 C3P01024 1663 aa27.24■■□□□ 1.95
ATP2A3-212ENST00000572694 ZNF644Q9H582 1327 aaPredicted RBP27.22■■□□□ 1.95
ATP2A3-212ENST00000572694 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
ATP2A3-212ENST00000572694 INO80Q9ULG1 1556 aaPredicted RBP27.21■■□□□ 1.95
ATP2A3-212ENST00000572694 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
ATP2A3-212ENST00000572694 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
ATP2A3-212ENST00000572694 A2MP01023 1474 aa27.19■■□□□ 1.94
ATP2A3-212ENST00000572694 RTEL1-TNFRSF6BF6WH68 1400 aa27.17■■□□□ 1.94
ATP2A3-212ENST00000572694 SUPT6HQ7KZ85 1726 aaKnown RBP27.17■■□□□ 1.94
ATP2A3-212ENST00000572694 RSPH4AQ5TD94 716 aa27.17■■□□□ 1.94
ATP2A3-212ENST00000572694 PPP6R1Q9UPN7 881 aa27.17■■□□□ 1.94
ATP2A3-212ENST00000572694 PLXNC1O60486 1568 aa27.17■■□□□ 1.94
ATP2A3-212ENST00000572694 ZMYM3Q14202 1370 aa27.16■■□□□ 1.94
ATP2A3-212ENST00000572694 MROH2AA6NES4 1674 aa27.14■■□□□ 1.94
ATP2A3-212ENST00000572694 NCOA2Q15596 1464 aa27.14■■□□□ 1.94
ATP2A3-212ENST00000572694 STRCQ7RTU9 1775 aa27.13■■□□□ 1.93
ATP2A3-212ENST00000572694 NPATQ14207 1427 aa27.13■■□□□ 1.93
ATP2A3-212ENST00000572694 ADGBQ8N7X0 1667 aa27.12■■□□□ 1.93
ATP2A3-212ENST00000572694 VPS8Q8N3P4 1428 aa27.12■■□□□ 1.93
ATP2A3-212ENST00000572694 CERKQ8TCT0 537 aa27.1■■□□□ 1.93
ATP2A3-212ENST00000572694 GGT6Q6P531 493 aa27.09■■□□□ 1.93
ATP2A3-212ENST00000572694 DHX29Q7Z478 1369 aaKnown RBP27.09■■□□□ 1.93
ATP2A3-212ENST00000572694 PTPRTO14522 1441 aa27.05■■□□□ 1.92
ATP2A3-212ENST00000572694 LRRC9Q6ZRR7 1453 aa27.05■■□□□ 1.92
ATP2A3-212ENST00000572694 CAMSAP2Q08AD1 1489 aa27.04■■□□□ 1.92
ATP2A3-212ENST00000572694 CCDC141Q6ZP82 1450 aa27.04■■□□□ 1.92
ATP2A3-212ENST00000572694 MAP3K1Q13233 1512 aa27.04■■□□□ 1.92
ATP2A3-212ENST00000572694 CLTCQ00610 1675 aaKnown RBP27.03■■□□□ 1.92
ATP2A3-212ENST00000572694 TSPY4P0CV99 314 aa26.99■■□□□ 1.91
ATP2A3-212ENST00000572694 TSPY10P0CW01 314 aa26.99■■□□□ 1.91
ATP2A3-212ENST00000572694 PTPRKQ15262 1439 aa26.99■■□□□ 1.91
ATP2A3-212ENST00000572694 ARHGEF5Q12774 1597 aa26.98■■□□□ 1.91
ATP2A3-212ENST00000572694 NCOA1Q15788 1441 aa26.98■■□□□ 1.91
ATP2A3-212ENST00000572694 KIF3BO15066 747 aa26.96■■□□□ 1.91
ATP2A3-212ENST00000572694 KANK4Q5T7N3 995 aaPredicted RBP26.96■■□□□ 1.91
ATP2A3-212ENST00000572694 MIA2Q96PC5 1412 aa26.91■■□□□ 1.9
ATP2A3-212ENST00000572694 CAMSAP1Q5T5Y3 1602 aa26.91■■□□□ 1.9
ATP2A3-212ENST00000572694 FAM135AQ9P2D6 1515 aa26.9■■□□□ 1.9
ATP2A3-212ENST00000572694 PKD2Q13563 968 aa26.88■■□□□ 1.89
ATP2A3-212ENST00000572694 ZNF142P52746 1687 aaPredicted RBP26.88■■□□□ 1.89
ATP2A3-212ENST00000572694 MYOM3Q5VTT5 1437 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms