RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 HFM1A2PYH4 1435 aa7□□□□□ -1.29
NDE1-204ENST00000572503 ZCCHC11Q5TAX3 1644 aaKnown RBP6.99□□□□□ -1.29
NDE1-204ENST00000572503 KDM5BQ9UGL1 1544 aa6.99□□□□□ -1.29
NDE1-204ENST00000572503 NAIPQ13075 1403 aa6.99□□□□□ -1.29
NDE1-204ENST00000572503 CDC42BPBQ9Y5S2 1711 aa6.98□□□□□ -1.29
NDE1-204ENST00000572503 PREX2Q70Z35 1606 aa6.98□□□□□ -1.29
NDE1-204ENST00000572503 ADGBQ8N7X0 1667 aa6.98□□□□□ -1.29
NDE1-204ENST00000572503 ABCC5O15440 1437 aa6.97□□□□□ -1.29
NDE1-204ENST00000572503 KDM6BO15054 1643 aa6.97□□□□□ -1.29
NDE1-204ENST00000572503 CAMSAP2Q08AD1 1489 aa6.97□□□□□ -1.29
NDE1-204ENST00000572503 ARHGEF5Q12774 1597 aa6.96□□□□□ -1.29
NDE1-204ENST00000572503 TTC37Q6PGP7 1564 aa6.96□□□□□ -1.29
NDE1-204ENST00000572503 DAPK1P53355 1430 aa6.96□□□□□ -1.3
NDE1-204ENST00000572503 FAM50AQ14320 339 aaKnown RBP6.96□□□□□ -1.3
NDE1-204ENST00000572503 CDK11AQ9UQ88 783 aaPredicted RBP6.96□□□□□ -1.3
NDE1-204ENST00000572503 ADGRL2O95490 1459 aa6.96□□□□□ -1.3
NDE1-204ENST00000572503 ROCK1Q13464 1354 aa6.95□□□□□ -1.3
NDE1-204ENST00000572503 ARID3CA6NKF2 412 aa6.95□□□□□ -1.3
NDE1-204ENST00000572503 MYO5CQ9NQX4 1742 aa6.95□□□□□ -1.3
NDE1-204ENST00000572503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.95□□□□□ -1.3
NDE1-204ENST00000572503 SAMD9LQ8IVG5 1584 aa6.95□□□□□ -1.3
NDE1-204ENST00000572503 DENND4BO75064 1496 aaPredicted RBP6.94□□□□□ -1.3
NDE1-204ENST00000572503 SHANK2Q9UPX8 1470 aa6.94□□□□□ -1.3
NDE1-204ENST00000572503 MBD5Q9P267 1494 aa6.92□□□□□ -1.3
NDE1-204ENST00000572503 ARAP3Q8WWN8 1544 aa6.92□□□□□ -1.3
NDE1-204ENST00000572503 MAST1Q9Y2H9 1570 aa6.92□□□□□ -1.3
NDE1-204ENST00000572503 ITGAEP38570 1179 aa6.92□□□□□ -1.3
NDE1-204ENST00000572503 DMRT2Q9Y5R5 561 aa6.92□□□□□ -1.3
NDE1-204ENST00000572503 ZNF644Q9H582 1327 aaPredicted RBP6.92□□□□□ -1.3
NDE1-204ENST00000572503 PLEKHD1A6NEE1 506 aa6.91□□□□□ -1.3
NDE1-204ENST00000572503 ABCA9Q8IUA7 1624 aa6.9□□□□□ -1.3
NDE1-204ENST00000572503 C1QBPQ07021 282 aaKnown RBP6.9□□□□□ -1.3
NDE1-204ENST00000572503 NCOA1Q15788 1441 aa6.9□□□□□ -1.31
NDE1-204ENST00000572503 ABCC1P33527 1531 aa6.89□□□□□ -1.31
NDE1-204ENST00000572503 KDM5DQ9BY66 1539 aa6.89□□□□□ -1.31
NDE1-204ENST00000572503 PLXNC1O60486 1568 aa6.89□□□□□ -1.31
NDE1-204ENST00000572503 CCDC141Q6ZP82 1450 aa6.88□□□□□ -1.31
NDE1-204ENST00000572503 WDR7Q9Y4E6 1490 aa6.88□□□□□ -1.31
NDE1-204ENST00000572503 PLCH2O75038 1416 aa6.88□□□□□ -1.31
NDE1-204ENST00000572503 KIAA1107Q9UPP5 1409 aa6.88□□□□□ -1.31
NDE1-204ENST00000572503 OSCARQ8IYS5 282 aa6.88□□□□□ -1.31
NDE1-204ENST00000572503 CFDP1Q9UEE9 299 aaPredicted RBP6.88□□□□□ -1.31
NDE1-204ENST00000572503 SYCP2Q9BX26 1530 aa6.87□□□□□ -1.31
NDE1-204ENST00000572503 ARHGEF12Q9NZN5 1544 aa6.87□□□□□ -1.31
NDE1-204ENST00000572503 PZPP20742 1482 aa6.87□□□□□ -1.31
NDE1-204ENST00000572503 PLEKHH2Q8IVE3 1493 aa6.87□□□□□ -1.31
NDE1-204ENST00000572503 C9orf84Q5VXU9 1444 aa6.87□□□□□ -1.31
NDE1-204ENST00000572503 ADRA2BP18089 450 aa6.86□□□□□ -1.31
NDE1-204ENST00000572503 UNC13BO14795 1591 aa6.86□□□□□ -1.31
NDE1-204ENST00000572503 ARHGAP5Q13017 1502 aa6.86□□□□□ -1.31
NDE1-204ENST00000572503 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
NDE1-204ENST00000572503 RRP7BPQ9NSQ0 103 aa6.85□□□□□ -1.31
NDE1-204ENST00000572503 ASXL2Q76L83 1435 aa6.84□□□□□ -1.31
NDE1-204ENST00000572503 RIMBP3CA6NJZ7 1639 aa6.84□□□□□ -1.31
NDE1-204ENST00000572503 RIMBP3BA6NNM3 1639 aa6.84□□□□□ -1.31
NDE1-204ENST00000572503 RIMBP3Q9UFD9 1639 aa6.84□□□□□ -1.31
NDE1-204ENST00000572503 CHIC2Q9UKJ5 165 aa6.84□□□□□ -1.31
NDE1-204ENST00000572503 MAGI2Q86UL8 1455 aa6.84□□□□□ -1.31
NDE1-204ENST00000572503 ANKRD30AQ9BXX3 1397 aa6.83□□□□□ -1.32
NDE1-204ENST00000572503 INO80Q9ULG1 1556 aaPredicted RBP6.83□□□□□ -1.32
NDE1-204ENST00000572503 TIMELESSQ9UNS1 1208 aa6.83□□□□□ -1.32
NDE1-204ENST00000572503 ANKRD50Q9ULJ7 1429 aa6.83□□□□□ -1.32
NDE1-204ENST00000572503 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
NDE1-204ENST00000572503 ZFYVE16Q7Z3T8 1539 aa6.82□□□□□ -1.32
NDE1-204ENST00000572503 PLSCR2Q9NRY7 297 aa6.82□□□□□ -1.32
NDE1-204ENST00000572503 KIF15Q9NS87 1388 aa6.82□□□□□ -1.32
NDE1-204ENST00000572503 DEPDC5O75140 1603 aa6.81□□□□□ -1.32
NDE1-204ENST00000572503 IQGAP3Q86VI3 1631 aa6.81□□□□□ -1.32
NDE1-204ENST00000572503 RSPH4AQ5TD94 716 aa6.81□□□□□ -1.32
NDE1-204ENST00000572503 SIN3AQ96ST3 1273 aa6.81□□□□□ -1.32
NDE1-204ENST00000572503 TRAPPC8Q9Y2L5 1435 aa6.81□□□□□ -1.32
NDE1-204ENST00000572503 CFAP74Q9C0B2 1584 aa6.81□□□□□ -1.32
NDE1-204ENST00000572503 DUOX2Q9NRD8 1548 aa6.81□□□□□ -1.32
NDE1-204ENST00000572503 RPRD2Q5VT52 1461 aaKnown RBP6.8□□□□□ -1.32
NDE1-204ENST00000572503 TEX14Q8IWB6 1497 aa6.8□□□□□ -1.32
NDE1-204ENST00000572503 ZNF316A6NFI3 1004 aaPredicted RBP6.8□□□□□ -1.32
NDE1-204ENST00000572503 RTEL1-TNFRSF6BF6WH68 1400 aa6.8□□□□□ -1.32
NDE1-204ENST00000572503 GLI2P10070 1586 aa6.8□□□□□ -1.32
NDE1-204ENST00000572503 HNRNPMP52272 730 aaKnown RBP eCLIP6.8□□□□□ -1.32
NDE1-204ENST00000572503 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
NDE1-204ENST00000572503 ZNF777Q9ULD5 760 aaPredicted RBP6.8□□□□□ -1.32
NDE1-204ENST00000572503 KIDINS220Q9ULH0 1771 aa6.8□□□□□ -1.32
NDE1-204ENST00000572503 MAP3K4Q9Y6R4 1608 aa6.79□□□□□ -1.32
NDE1-204ENST00000572503 FANCAO15360 1455 aa6.79□□□□□ -1.32
NDE1-204ENST00000572503 KDM5CP41229 1560 aa6.79□□□□□ -1.32
NDE1-204ENST00000572503 EFCAB2Q5VUJ9 269 aa6.79□□□□□ -1.32
NDE1-204ENST00000572503 VWDEQ8N2E2 1590 aa6.78□□□□□ -1.32
NDE1-204ENST00000572503 ERBINQ96RT1 1412 aa6.78□□□□□ -1.32
NDE1-204ENST00000572503 ATP7AQ04656 1500 aa6.78□□□□□ -1.32
NDE1-204ENST00000572503 FAM135AQ9P2D6 1515 aa6.78□□□□□ -1.32
NDE1-204ENST00000572503 PPP1R15AO75807 674 aaPredicted RBP6.78□□□□□ -1.32
NDE1-204ENST00000572503 MROH1Q8NDA8 1641 aa6.78□□□□□ -1.32
NDE1-204ENST00000572503 EIF2AK4Q9P2K8 1649 aaKnown RBP6.78□□□□□ -1.32
NDE1-204ENST00000572503 BCORL1Q5H9F3 1711 aa6.78□□□□□ -1.32
NDE1-204ENST00000572503 PPRC1Q5VV67 1664 aaKnown RBP6.77□□□□□ -1.32
NDE1-204ENST00000572503 KCNH8Q96L42 1107 aa6.77□□□□□ -1.33
NDE1-204ENST00000572503 RICTORQ6R327 1708 aa6.76□□□□□ -1.33
NDE1-204ENST00000572503 TSPY4P0CV99 314 aa6.76□□□□□ -1.33
NDE1-204ENST00000572503 TSPY10P0CW01 314 aa6.76□□□□□ -1.33
NDE1-204ENST00000572503 ATP10AO60312 1499 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms