RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ATMINO43313 823 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-214ENST00000572365 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
SF3B3-214ENST00000572365 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
SF3B3-214ENST00000572365 SCRIBQ14160 1630 aa11.02□□□□□ -0.65
SF3B3-214ENST00000572365 IER5LQ5T953 404 aa11.01□□□□□ -0.65
SF3B3-214ENST00000572365 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
SF3B3-214ENST00000572365 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
SF3B3-214ENST00000572365 ARIH1Q9Y4X5 557 aaPredicted RBP10.99□□□□□ -0.65
SF3B3-214ENST00000572365 CAMK2BQ13554 666 aa10.98□□□□□ -0.65
SF3B3-214ENST00000572365 GPHNQ9NQX3 736 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-214ENST00000572365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
SF3B3-214ENST00000572365 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
SF3B3-214ENST00000572365 OCEL1Q9H607 264 aa10.97□□□□□ -0.65
SF3B3-214ENST00000572365 TMEM121BQ9BXQ6 578 aaPredicted RBP10.94□□□□□ -0.66
SF3B3-214ENST00000572365 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-214ENST00000572365 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
SF3B3-214ENST00000572365 LMOD2Q6P5Q4 547 aa10.93□□□□□ -0.66
SF3B3-214ENST00000572365 TULP1O00294 542 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-214ENST00000572365 SEMA3EO15041 775 aa10.92□□□□□ -0.66
SF3B3-214ENST00000572365 MYO15BQ96JP2 1530 aa10.9□□□□□ -0.66
SF3B3-214ENST00000572365 ERCC6Q03468 1493 aa10.9□□□□□ -0.66
SF3B3-214ENST00000572365 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
SF3B3-214ENST00000572365 CUX2O14529 1486 aa10.89□□□□□ -0.67
SF3B3-214ENST00000572365 PLCG2P16885 1265 aa10.89□□□□□ -0.67
SF3B3-214ENST00000572365 DSG2Q14126 1118 aa10.88□□□□□ -0.67
SF3B3-214ENST00000572365 FOXK1P85037 733 aa10.87□□□□□ -0.67
SF3B3-214ENST00000572365 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
SF3B3-214ENST00000572365 TMC2Q8TDI7 906 aa10.87□□□□□ -0.67
SF3B3-214ENST00000572365 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
SF3B3-214ENST00000572365 G3V3G9 751 aa10.85□□□□□ -0.67
SF3B3-214ENST00000572365 KIF3CO14782 793 aa10.85□□□□□ -0.67
SF3B3-214ENST00000572365 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-214ENST00000572365 SHROOM4Q9ULL8 1493 aa10.85□□□□□ -0.67
SF3B3-214ENST00000572365 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
SF3B3-214ENST00000572365 COLQQ9Y215 455 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-214ENST00000572365 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
SF3B3-214ENST00000572365 SMYD5Q6GMV2 418 aa10.82□□□□□ -0.68
SF3B3-214ENST00000572365 SEC24BO95487 1268 aa10.81□□□□□ -0.68
SF3B3-214ENST00000572365 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
SF3B3-214ENST00000572365 SLC39A7Q92504 469 aa10.81□□□□□ -0.68
SF3B3-214ENST00000572365 C7P10643 843 aa10.8□□□□□ -0.68
SF3B3-214ENST00000572365 PLPP6Q8IY26 295 aa10.8□□□□□ -0.68
SF3B3-214ENST00000572365 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
SF3B3-214ENST00000572365 POTEFA5A3E0 1075 aa10.78□□□□□ -0.68
SF3B3-214ENST00000572365 SPDYE16A6NNV3 312 aaPredicted RBP10.78□□□□□ -0.68
SF3B3-214ENST00000572365 DPYSL4O14531 572 aa10.78□□□□□ -0.68
SF3B3-214ENST00000572365 PDIA6Q15084 440 aa10.77□□□□□ -0.69
SF3B3-214ENST00000572365 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
SF3B3-214ENST00000572365 TMEM92Q6UXU6 159 aa10.76□□□□□ -0.69
SF3B3-214ENST00000572365 NESP48681 1621 aa10.75□□□□□ -0.69
SF3B3-214ENST00000572365 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-214ENST00000572365 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
SF3B3-214ENST00000572365 ZCCHC6Q5VYS8 1495 aaKnown RBP10.7□□□□□ -0.7
SF3B3-214ENST00000572365 ZMYND10O75800 440 aa10.69□□□□□ -0.7
SF3B3-214ENST00000572365 MAP3K9P80192 1104 aa10.68□□□□□ -0.7
SF3B3-214ENST00000572365 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
SF3B3-214ENST00000572365 OXER1Q8TDS5 423 aa10.68□□□□□ -0.7
SF3B3-214ENST00000572365 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
SF3B3-214ENST00000572365 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.7
SF3B3-214ENST00000572365 BARGINQ6ZT62 677 aa10.64□□□□□ -0.71
SF3B3-214ENST00000572365 UPF1Q92900 1129 aaKnown RBP eCLIP10.64□□□□□ -0.71
SF3B3-214ENST00000572365 SLC24A3Q9HC58 644 aa10.63□□□□□ -0.71
SF3B3-214ENST00000572365 PTGER2P43116 358 aa10.62□□□□□ -0.71
SF3B3-214ENST00000572365 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
SF3B3-214ENST00000572365 PTCD2Q8WV60 388 aaKnown RBP10.61□□□□□ -0.71
SF3B3-214ENST00000572365 SLC34A2O95436 690 aa10.6□□□□□ -0.71
SF3B3-214ENST00000572365 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-214ENST00000572365 TBC1D12O60347 775 aa10.59□□□□□ -0.71
SF3B3-214ENST00000572365 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
SF3B3-214ENST00000572365 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
SF3B3-214ENST00000572365 GRXCR2A6NFK2 248 aa10.57□□□□□ -0.72
SF3B3-214ENST00000572365 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
SF3B3-214ENST00000572365 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.57□□□□□ -0.72
SF3B3-214ENST00000572365 GPR37O15354 613 aa10.56□□□□□ -0.72
SF3B3-214ENST00000572365 EVI5O60447 810 aa10.56□□□□□ -0.72
SF3B3-214ENST00000572365 OSBPP22059 807 aa10.56□□□□□ -0.72
SF3B3-214ENST00000572365 KIF21AQ7Z4S6 1674 aa10.54□□□□□ -0.72
SF3B3-214ENST00000572365 ANO8Q9HCE9 1232 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-214ENST00000572365 NCAPD3P42695 1498 aa10.54□□□□□ -0.72
SF3B3-214ENST00000572365 DDX12PQ92771 950 aa10.53□□□□□ -0.72
SF3B3-214ENST00000572365 AK7Q96M32 723 aa10.53□□□□□ -0.72
SF3B3-214ENST00000572365 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-214ENST00000572365 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
SF3B3-214ENST00000572365 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
SF3B3-214ENST00000572365 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
SF3B3-214ENST00000572365 ATAD2BQ9ULI0 1458 aa10.49□□□□□ -0.73
SF3B3-214ENST00000572365 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
SF3B3-214ENST00000572365 POTEJP0CG39 1038 aa10.47□□□□□ -0.73
SF3B3-214ENST00000572365 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
SF3B3-214ENST00000572365 PCDHGA4Q9Y5G9 962 aa10.46□□□□□ -0.73
SF3B3-214ENST00000572365 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
SF3B3-214ENST00000572365 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
SF3B3-214ENST00000572365 FCHSD2O94868 740 aa10.45□□□□□ -0.74
SF3B3-214ENST00000572365 KDM4FA0A1W2PPD8 638 aa10.44□□□□□ -0.74
SF3B3-214ENST00000572365 TRIM66O15016 1216 aa10.44□□□□□ -0.74
SF3B3-214ENST00000572365 PHF14O94880 888 aa10.44□□□□□ -0.74
SF3B3-214ENST00000572365 HIC1Q14526 733 aa10.44□□□□□ -0.74
SF3B3-214ENST00000572365 EPAS1Q99814 870 aa10.44□□□□□ -0.74
SF3B3-214ENST00000572365 BAZ1AQ9NRL2 1556 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-214ENST00000572365 POTEMA6NI47 508 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms