RNA–Protein interactions for RNA: ENST00000572053.5

ABCC1-203, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 3

Gene ABCC1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-203ENST00000572053 CLIP1P30622 1438 aa19.13■□□□□ 0.65
ABCC1-203ENST00000572053 SCAPERQ9BY12 1400 aa19.13■□□□□ 0.65
ABCC1-203ENST00000572053 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
ABCC1-203ENST00000572053 YEATS2Q9ULM3 1422 aa19.11■□□□□ 0.65
ABCC1-203ENST00000572053 EFCAB2Q5VUJ9 269 aa19.1■□□□□ 0.65
ABCC1-203ENST00000572053 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
ABCC1-203ENST00000572053 PCF11O94913 1555 aaKnown RBP19.08■□□□□ 0.65
ABCC1-203ENST00000572053 ARHGAP5Q13017 1502 aa19.07■□□□□ 0.64
ABCC1-203ENST00000572053 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
ABCC1-203ENST00000572053 ZNF518AQ6AHZ1 1483 aa19.06■□□□□ 0.64
ABCC1-203ENST00000572053 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
ABCC1-203ENST00000572053 CASKIN1Q8WXD9 1431 aa19.04■□□□□ 0.64
ABCC1-203ENST00000572053 LRRIQ1Q96JM4 1722 aa19.04■□□□□ 0.64
ABCC1-203ENST00000572053 ATP10AO60312 1499 aa19.03■□□□□ 0.64
ABCC1-203ENST00000572053 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
ABCC1-203ENST00000572053 SIGLEC1Q9BZZ2 1709 aa19.03■□□□□ 0.64
ABCC1-203ENST00000572053 KDM5CP41229 1560 aa19.01■□□□□ 0.63
ABCC1-203ENST00000572053 FER1L4A9Z1Z3 1794 aa19.01■□□□□ 0.63
ABCC1-203ENST00000572053 FYCO1Q9BQS8 1478 aa19■□□□□ 0.63
ABCC1-203ENST00000572053 PREX2Q70Z35 1606 aa18.99■□□□□ 0.63
ABCC1-203ENST00000572053 MLECQ14165 292 aa18.98■□□□□ 0.63
ABCC1-203ENST00000572053 ARHGEF12Q9NZN5 1544 aa18.98■□□□□ 0.63
ABCC1-203ENST00000572053 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
ABCC1-203ENST00000572053 ABCC1P33527 1531 aa18.95■□□□□ 0.62
ABCC1-203ENST00000572053 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
ABCC1-203ENST00000572053 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
ABCC1-203ENST00000572053 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
ABCC1-203ENST00000572053 AFAP1Q8N556 730 aa18.93■□□□□ 0.62
ABCC1-203ENST00000572053 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
ABCC1-203ENST00000572053 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
ABCC1-203ENST00000572053 ITSN2Q9NZM3 1697 aa18.9■□□□□ 0.62
ABCC1-203ENST00000572053 FBXO41Q8TF61 875 aa18.9■□□□□ 0.62
ABCC1-203ENST00000572053 CDC42BPAQ5VT25 1732 aa18.89■□□□□ 0.61
ABCC1-203ENST00000572053 ABCA6Q8N139 1617 aa18.89■□□□□ 0.61
ABCC1-203ENST00000572053 HSPA2P54652 639 aa18.88■□□□□ 0.61
ABCC1-203ENST00000572053 TRAPPC8Q9Y2L5 1435 aa18.88■□□□□ 0.61
ABCC1-203ENST00000572053 PREX1Q8TCU6 1659 aa18.86■□□□□ 0.61
ABCC1-203ENST00000572053 AGLP35573 1532 aa18.86■□□□□ 0.61
ABCC1-203ENST00000572053 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
ABCC1-203ENST00000572053 UHRF1BP1Q6BDS2 1440 aa18.82■□□□□ 0.6
ABCC1-203ENST00000572053 SAMD9LQ8IVG5 1584 aa18.81■□□□□ 0.6
ABCC1-203ENST00000572053 SYCP2Q9BX26 1530 aa18.81■□□□□ 0.6
ABCC1-203ENST00000572053 GPATCH8Q9UKJ3 1502 aaKnown RBP18.81■□□□□ 0.6
ABCC1-203ENST00000572053 ESF1Q9H501 851 aaKnown RBP18.81■□□□□ 0.6
ABCC1-203ENST00000572053 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
ABCC1-203ENST00000572053 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
ABCC1-203ENST00000572053 ZNF777Q9ULD5 760 aaPredicted RBP18.8■□□□□ 0.6
ABCC1-203ENST00000572053 CEBPAP49715 358 aaPredicted RBP18.79■□□□□ 0.6
ABCC1-203ENST00000572053 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
ABCC1-203ENST00000572053 CNTLNQ9NXG0 1405 aa18.78■□□□□ 0.6
ABCC1-203ENST00000572053 KIAA1107Q9UPP5 1409 aa18.77■□□□□ 0.6
ABCC1-203ENST00000572053 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
ABCC1-203ENST00000572053 C3P01024 1663 aa18.76■□□□□ 0.59
ABCC1-203ENST00000572053 CFDP1Q9UEE9 299 aaPredicted RBP18.76■□□□□ 0.59
ABCC1-203ENST00000572053 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
ABCC1-203ENST00000572053 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
ABCC1-203ENST00000572053 ATP7AQ04656 1500 aa18.74■□□□□ 0.59
ABCC1-203ENST00000572053 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
ABCC1-203ENST00000572053 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.59
ABCC1-203ENST00000572053 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
ABCC1-203ENST00000572053 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
ABCC1-203ENST00000572053 MROH2AA6NES4 1674 aa18.7■□□□□ 0.58
ABCC1-203ENST00000572053 TIAM1Q13009 1591 aa18.7■□□□□ 0.58
ABCC1-203ENST00000572053 PLXNC1O60486 1568 aa18.69■□□□□ 0.58
ABCC1-203ENST00000572053 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
ABCC1-203ENST00000572053 A2MP01023 1474 aa18.68■□□□□ 0.58
ABCC1-203ENST00000572053 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
ABCC1-203ENST00000572053 NPATQ14207 1427 aa18.67■□□□□ 0.58
ABCC1-203ENST00000572053 STRCQ7RTU9 1775 aa18.67■□□□□ 0.58
ABCC1-203ENST00000572053 ADGBQ8N7X0 1667 aa18.64■□□□□ 0.57
ABCC1-203ENST00000572053 PTPRTO14522 1441 aa18.64■□□□□ 0.57
ABCC1-203ENST00000572053 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
ABCC1-203ENST00000572053 RTEL1-TNFRSF6BF6WH68 1400 aa18.62■□□□□ 0.57
ABCC1-203ENST00000572053 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
ABCC1-203ENST00000572053 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
ABCC1-203ENST00000572053 NCOA1Q15788 1441 aa18.6■□□□□ 0.57
ABCC1-203ENST00000572053 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
ABCC1-203ENST00000572053 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
ABCC1-203ENST00000572053 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
ABCC1-203ENST00000572053 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
ABCC1-203ENST00000572053 GGT6Q6P531 493 aa18.58■□□□□ 0.56
ABCC1-203ENST00000572053 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
ABCC1-203ENST00000572053 CAMSAP1Q5T5Y3 1602 aa18.56■□□□□ 0.56
ABCC1-203ENST00000572053 ZNF142P52746 1687 aaPredicted RBP18.56■□□□□ 0.56
ABCC1-203ENST00000572053 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
ABCC1-203ENST00000572053 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
ABCC1-203ENST00000572053 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
ABCC1-203ENST00000572053 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
ABCC1-203ENST00000572053 VPS8Q8N3P4 1428 aa18.54■□□□□ 0.56
ABCC1-203ENST00000572053 FAM135AQ9P2D6 1515 aa18.54■□□□□ 0.56
ABCC1-203ENST00000572053 CEP170BQ9Y4F5 1589 aaPredicted RBP18.53■□□□□ 0.56
ABCC1-203ENST00000572053 PLA2R1Q13018 1463 aa18.52■□□□□ 0.56
ABCC1-203ENST00000572053 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
ABCC1-203ENST00000572053 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
ABCC1-203ENST00000572053 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
ABCC1-203ENST00000572053 KDM5DQ9BY66 1539 aa18.49■□□□□ 0.55
ABCC1-203ENST00000572053 LTBP4Q8N2S1 1624 aa18.49■□□□□ 0.55
ABCC1-203ENST00000572053 PKD2Q13563 968 aa18.48■□□□□ 0.55
ABCC1-203ENST00000572053 KIF3BO15066 747 aa18.47■□□□□ 0.55
ABCC1-203ENST00000572053 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms