RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 APLP2Q06481 763 aa18.71■□□□□ 0.59
TRIM25-205ENST00000572021 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
TRIM25-205ENST00000572021 EFCAB2Q5VUJ9 269 aa18.7■□□□□ 0.58
TRIM25-205ENST00000572021 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
TRIM25-205ENST00000572021 GPATCH8Q9UKJ3 1502 aaKnown RBP18.69■□□□□ 0.58
TRIM25-205ENST00000572021 PHLDB1Q86UU1 1377 aa18.69■□□□□ 0.58
TRIM25-205ENST00000572021 CCNB3Q8WWL7 1395 aa18.69■□□□□ 0.58
TRIM25-205ENST00000572021 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
TRIM25-205ENST00000572021 FRMPD1Q5SYB0 1578 aa18.68■□□□□ 0.58
TRIM25-205ENST00000572021 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
TRIM25-205ENST00000572021 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
TRIM25-205ENST00000572021 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
TRIM25-205ENST00000572021 DENND4BO75064 1496 aaPredicted RBP18.66■□□□□ 0.58
TRIM25-205ENST00000572021 RICTORQ6R327 1708 aa18.65■□□□□ 0.58
TRIM25-205ENST00000572021 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
TRIM25-205ENST00000572021 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
TRIM25-205ENST00000572021 ITSN2Q9NZM3 1697 aa18.62■□□□□ 0.57
TRIM25-205ENST00000572021 ABCC1P33527 1531 aa18.61■□□□□ 0.57
TRIM25-205ENST00000572021 ARHGEF12Q9NZN5 1544 aa18.61■□□□□ 0.57
TRIM25-205ENST00000572021 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
TRIM25-205ENST00000572021 POGZQ7Z3K3 1410 aa18.6■□□□□ 0.57
TRIM25-205ENST00000572021 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
TRIM25-205ENST00000572021 AFAP1Q8N556 730 aa18.58■□□□□ 0.56
TRIM25-205ENST00000572021 SYCP2Q9BX26 1530 aa18.58■□□□□ 0.56
TRIM25-205ENST00000572021 TRAPPC8Q9Y2L5 1435 aa18.57■□□□□ 0.56
TRIM25-205ENST00000572021 HNRNPMP52272 730 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRIM25-205ENST00000572021 ZMYM4Q5VZL5 1548 aa18.54■□□□□ 0.56
TRIM25-205ENST00000572021 ZNF518AQ6AHZ1 1483 aa18.54■□□□□ 0.56
TRIM25-205ENST00000572021 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
TRIM25-205ENST00000572021 MYOM3Q5VTT5 1437 aa18.52■□□□□ 0.56
TRIM25-205ENST00000572021 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.55
TRIM25-205ENST00000572021 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
TRIM25-205ENST00000572021 KDM5CP41229 1560 aa18.51■□□□□ 0.55
TRIM25-205ENST00000572021 ZFYVE16Q7Z3T8 1539 aa18.51■□□□□ 0.55
TRIM25-205ENST00000572021 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
TRIM25-205ENST00000572021 PLEKHH2Q8IVE3 1493 aa18.5■□□□□ 0.55
TRIM25-205ENST00000572021 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
TRIM25-205ENST00000572021 HECW2Q9P2P5 1572 aa18.48■□□□□ 0.55
TRIM25-205ENST00000572021 MBD5Q9P267 1494 aa18.47■□□□□ 0.55
TRIM25-205ENST00000572021 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.55
TRIM25-205ENST00000572021 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
TRIM25-205ENST00000572021 KIDINS220Q9ULH0 1771 aa18.45■□□□□ 0.54
TRIM25-205ENST00000572021 MIA2Q96PC5 1412 aa18.45■□□□□ 0.54
TRIM25-205ENST00000572021 ABCA6Q8N139 1617 aa18.45■□□□□ 0.54
TRIM25-205ENST00000572021 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
TRIM25-205ENST00000572021 SPAG9O60271 1321 aaKnown RBP18.44■□□□□ 0.54
TRIM25-205ENST00000572021 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
TRIM25-205ENST00000572021 MLH3Q9UHC1 1453 aa18.43■□□□□ 0.54
TRIM25-205ENST00000572021 ARID4BQ4LE39 1312 aaPredicted RBP18.43■□□□□ 0.54
TRIM25-205ENST00000572021 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
TRIM25-205ENST00000572021 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
TRIM25-205ENST00000572021 ATP10AO60312 1499 aa18.41■□□□□ 0.54
TRIM25-205ENST00000572021 ATP7AQ04656 1500 aa18.41■□□□□ 0.54
TRIM25-205ENST00000572021 CCDC141Q6ZP82 1450 aa18.4■□□□□ 0.54
TRIM25-205ENST00000572021 INO80Q9ULG1 1556 aaPredicted RBP18.4■□□□□ 0.54
TRIM25-205ENST00000572021 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
TRIM25-205ENST00000572021 C9orf84Q5VXU9 1444 aa18.38■□□□□ 0.53
TRIM25-205ENST00000572021 FAM50AQ14320 339 aaKnown RBP18.37■□□□□ 0.53
TRIM25-205ENST00000572021 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
TRIM25-205ENST00000572021 MLECQ14165 292 aa18.35■□□□□ 0.53
TRIM25-205ENST00000572021 BCORL1Q5H9F3 1711 aa18.35■□□□□ 0.53
TRIM25-205ENST00000572021 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
TRIM25-205ENST00000572021 TSPY4P0CV99 314 aa18.33■□□□□ 0.52
TRIM25-205ENST00000572021 TSPY10P0CW01 314 aa18.33■□□□□ 0.52
TRIM25-205ENST00000572021 CROCC2H7BZ55 1655 aa18.32■□□□□ 0.52
TRIM25-205ENST00000572021 DNMT1P26358 1616 aaKnown RBP18.32■□□□□ 0.52
TRIM25-205ENST00000572021 ABCC5O15440 1437 aa18.32■□□□□ 0.52
TRIM25-205ENST00000572021 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
TRIM25-205ENST00000572021 RTEL1-TNFRSF6BF6WH68 1400 aa18.31■□□□□ 0.52
TRIM25-205ENST00000572021 DAPK1P53355 1430 aa18.31■□□□□ 0.52
TRIM25-205ENST00000572021 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
TRIM25-205ENST00000572021 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
TRIM25-205ENST00000572021 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
TRIM25-205ENST00000572021 MADDQ8WXG6 1647 aa18.29■□□□□ 0.52
TRIM25-205ENST00000572021 A2MP01023 1474 aa18.29■□□□□ 0.52
TRIM25-205ENST00000572021 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
TRIM25-205ENST00000572021 MAST1Q9Y2H9 1570 aa18.28■□□□□ 0.52
TRIM25-205ENST00000572021 PLXNC1O60486 1568 aa18.26■□□□□ 0.51
TRIM25-205ENST00000572021 RIMS1Q86UR5 1692 aaKnown RBP18.26■□□□□ 0.51
TRIM25-205ENST00000572021 ITGAEP38570 1179 aa18.25■□□□□ 0.51
TRIM25-205ENST00000572021 AGLP35573 1532 aa18.25■□□□□ 0.51
TRIM25-205ENST00000572021 SHANK2Q9UPX8 1470 aa18.24■□□□□ 0.51
TRIM25-205ENST00000572021 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
TRIM25-205ENST00000572021 DHX29Q7Z478 1369 aaKnown RBP18.23■□□□□ 0.51
TRIM25-205ENST00000572021 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
TRIM25-205ENST00000572021 RRP7BPQ9NSQ0 103 aa18.23■□□□□ 0.51
TRIM25-205ENST00000572021 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
TRIM25-205ENST00000572021 RRBP1Q9P2E9 1410 aaKnown RBP18.2■□□□□ 0.5
TRIM25-205ENST00000572021 PTPRMP28827 1452 aa18.2■□□□□ 0.5
TRIM25-205ENST00000572021 KIF3BO15066 747 aa18.2■□□□□ 0.5
TRIM25-205ENST00000572021 GGT6Q6P531 493 aa18.2■□□□□ 0.5
TRIM25-205ENST00000572021 KIF15Q9NS87 1388 aa18.2■□□□□ 0.5
TRIM25-205ENST00000572021 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
TRIM25-205ENST00000572021 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
TRIM25-205ENST00000572021 DUOX2Q9NRD8 1548 aa18.16■□□□□ 0.5
TRIM25-205ENST00000572021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRIM25-205ENST00000572021 CEBPAP49715 358 aaPredicted RBP18.15■□□□□ 0.5
TRIM25-205ENST00000572021 ADGRL2O95490 1459 aa18.14■□□□□ 0.5
TRIM25-205ENST00000572021 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.49
TRIM25-205ENST00000572021 CLTCQ00610 1675 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms