RNA–Protein interactions for RNA: ENST00000572007.1

LINC01896-204, Transcript of long intergenic non-protein coding RNA 1896, humanhuman

TSL 3

Gene LINC01896, Length 471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01896-204ENST00000572007 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.12
LINC01896-204ENST00000572007 CD109Q6YHK3 1445 aa15.82■□□□□ 0.12
LINC01896-204ENST00000572007 UBTFP17480 764 aaKnown RBP15.81■□□□□ 0.12
LINC01896-204ENST00000572007 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
LINC01896-204ENST00000572007 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
LINC01896-204ENST00000572007 RAPGEF6Q8TEU7 1601 aa15.77■□□□□ 0.12
LINC01896-204ENST00000572007 KDM4FA0A1W2PPD8 638 aa15.77■□□□□ 0.12
LINC01896-204ENST00000572007 EFCAB5A4FU69 1503 aa15.75■□□□□ 0.11
LINC01896-204ENST00000572007 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
LINC01896-204ENST00000572007 SSUH2Q9Y2M2 353 aa15.74■□□□□ 0.11
LINC01896-204ENST00000572007 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
LINC01896-204ENST00000572007 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
LINC01896-204ENST00000572007 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
LINC01896-204ENST00000572007 CFAP43Q8NDM7 1665 aa15.71■□□□□ 0.11
LINC01896-204ENST00000572007 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
LINC01896-204ENST00000572007 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
LINC01896-204ENST00000572007 ABCA9Q8IUA7 1624 aa15.66■□□□□ 0.1
LINC01896-204ENST00000572007 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
LINC01896-204ENST00000572007 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
LINC01896-204ENST00000572007 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
LINC01896-204ENST00000572007 ADGRL1O94910 1474 aa15.64■□□□□ 0.09
LINC01896-204ENST00000572007 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
LINC01896-204ENST00000572007 ARAP3Q8WWN8 1544 aa15.63■□□□□ 0.09
LINC01896-204ENST00000572007 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
LINC01896-204ENST00000572007 RAPGEF3O95398 923 aa15.62■□□□□ 0.09
LINC01896-204ENST00000572007 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
LINC01896-204ENST00000572007 NEO1Q92859 1461 aa15.6■□□□□ 0.09
LINC01896-204ENST00000572007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.58■□□□□ 0.09
LINC01896-204ENST00000572007 HECW1Q76N89 1606 aa15.55■□□□□ 0.08
LINC01896-204ENST00000572007 VASPP50552 380 aaPredicted RBP15.55■□□□□ 0.08
LINC01896-204ENST00000572007 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
LINC01896-204ENST00000572007 FANCAO15360 1455 aa15.54■□□□□ 0.08
LINC01896-204ENST00000572007 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
LINC01896-204ENST00000572007 TTC37Q6PGP7 1564 aa15.53■□□□□ 0.08
LINC01896-204ENST00000572007 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.08
LINC01896-204ENST00000572007 PLCH2O75038 1416 aa15.51■□□□□ 0.07
LINC01896-204ENST00000572007 CLIP1P30622 1438 aa15.51■□□□□ 0.07
LINC01896-204ENST00000572007 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
LINC01896-204ENST00000572007 FRMPD1Q5SYB0 1578 aa15.5■□□□□ 0.07
LINC01896-204ENST00000572007 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
LINC01896-204ENST00000572007 CASKIN1Q8WXD9 1431 aa15.5■□□□□ 0.07
LINC01896-204ENST00000572007 PCF11O94913 1555 aaKnown RBP15.47■□□□□ 0.07
LINC01896-204ENST00000572007 SCAPERQ9BY12 1400 aa15.46■□□□□ 0.07
LINC01896-204ENST00000572007 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.07
LINC01896-204ENST00000572007 ARID4BQ4LE39 1312 aaPredicted RBP15.45■□□□□ 0.06
LINC01896-204ENST00000572007 KIF14Q15058 1648 aa15.45■□□□□ 0.06
LINC01896-204ENST00000572007 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
LINC01896-204ENST00000572007 IFNLR1Q8IU57 520 aaPredicted RBP15.44■□□□□ 0.06
LINC01896-204ENST00000572007 CCDC18Q5T9S5 1454 aa15.43■□□□□ 0.06
LINC01896-204ENST00000572007 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
LINC01896-204ENST00000572007 YEATS2Q9ULM3 1422 aa15.43■□□□□ 0.06
LINC01896-204ENST00000572007 FYCO1Q9BQS8 1478 aa15.42■□□□□ 0.06
LINC01896-204ENST00000572007 ARHGEF40Q8TER5 1519 aa15.41■□□□□ 0.06
LINC01896-204ENST00000572007 RICTORQ6R327 1708 aa15.4■□□□□ 0.06
LINC01896-204ENST00000572007 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
LINC01896-204ENST00000572007 ARHGAP5Q13017 1502 aa15.39■□□□□ 0.05
LINC01896-204ENST00000572007 ZMYM4Q5VZL5 1548 aa15.39■□□□□ 0.05
LINC01896-204ENST00000572007 ZFYVE16Q7Z3T8 1539 aa15.38■□□□□ 0.05
LINC01896-204ENST00000572007 AFAP1Q8N556 730 aa15.38■□□□□ 0.05
LINC01896-204ENST00000572007 MAGI2Q86UL8 1455 aa15.38■□□□□ 0.05
LINC01896-204ENST00000572007 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
LINC01896-204ENST00000572007 PTPRMP28827 1452 aa15.37■□□□□ 0.05
LINC01896-204ENST00000572007 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
LINC01896-204ENST00000572007 MYO5CQ9NQX4 1742 aa15.36■□□□□ 0.05
LINC01896-204ENST00000572007 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
LINC01896-204ENST00000572007 HECW2Q9P2P5 1572 aa15.34■□□□□ 0.05
LINC01896-204ENST00000572007 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
LINC01896-204ENST00000572007 MLECQ14165 292 aa15.34■□□□□ 0.05
LINC01896-204ENST00000572007 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
LINC01896-204ENST00000572007 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.04
LINC01896-204ENST00000572007 BCORL1Q5H9F3 1711 aa15.33■□□□□ 0.04
LINC01896-204ENST00000572007 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.04
LINC01896-204ENST00000572007 TRAPPC8Q9Y2L5 1435 aa15.32■□□□□ 0.04
LINC01896-204ENST00000572007 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
LINC01896-204ENST00000572007 ZNF777Q9ULD5 760 aaPredicted RBP15.31■□□□□ 0.04
LINC01896-204ENST00000572007 ATP10AO60312 1499 aa15.31■□□□□ 0.04
LINC01896-204ENST00000572007 ARHGEF12Q9NZN5 1544 aa15.31■□□□□ 0.04
LINC01896-204ENST00000572007 MADDQ8WXG6 1647 aa15.31■□□□□ 0.04
LINC01896-204ENST00000572007 MTUS2Q5JR59 1369 aa15.3■□□□□ 0.04
LINC01896-204ENST00000572007 C9orf84Q5VXU9 1444 aa15.3■□□□□ 0.04
LINC01896-204ENST00000572007 GPATCH8Q9UKJ3 1502 aaKnown RBP15.3■□□□□ 0.04
LINC01896-204ENST00000572007 SIGLEC1Q9BZZ2 1709 aa15.29■□□□□ 0.04
LINC01896-204ENST00000572007 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
LINC01896-204ENST00000572007 KDM5CP41229 1560 aa15.28■□□□□ 0.04
LINC01896-204ENST00000572007 ABCC1P33527 1531 aa15.28■□□□□ 0.04
LINC01896-204ENST00000572007 CDC42BPBQ9Y5S2 1711 aa15.28■□□□□ 0.04
LINC01896-204ENST00000572007 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
LINC01896-204ENST00000572007 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.04
LINC01896-204ENST00000572007 CCNB3Q8WWL7 1395 aa15.26■□□□□ 0.03
LINC01896-204ENST00000572007 MLH3Q9UHC1 1453 aa15.26■□□□□ 0.03
LINC01896-204ENST00000572007 HNRNPMP52272 730 aaKnown RBP eCLIP15.25■□□□□ 0.03
LINC01896-204ENST00000572007 RIMS1Q86UR5 1692 aaKnown RBP15.23■□□□□ 0.03
LINC01896-204ENST00000572007 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
LINC01896-204ENST00000572007 CDC42BPAQ5VT25 1732 aa15.23■□□□□ 0.03
LINC01896-204ENST00000572007 SAMD9LQ8IVG5 1584 aa15.22■□□□□ 0.03
LINC01896-204ENST00000572007 SYCP2Q9BX26 1530 aa15.22■□□□□ 0.03
LINC01896-204ENST00000572007 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
LINC01896-204ENST00000572007 LMTK3Q96Q04 1460 aa15.2■□□□□ 0.02
LINC01896-204ENST00000572007 SPAG9O60271 1321 aaKnown RBP15.2■□□□□ 0.02
LINC01896-204ENST00000572007 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms