RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 MYO5CQ9NQX4 1742 aa25.53■■□□□ 1.68
TSR1-202ENST00000571806 CLIP1P30622 1438 aa25.51■■□□□ 1.67
TSR1-202ENST00000571806 TROQ12816 1431 aaPredicted RBP25.5■■□□□ 1.67
TSR1-202ENST00000571806 KIF14Q15058 1648 aa25.5■■□□□ 1.67
TSR1-202ENST00000571806 YEATS2Q9ULM3 1422 aa25.5■■□□□ 1.67
TSR1-202ENST00000571806 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
TSR1-202ENST00000571806 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
TSR1-202ENST00000571806 ATP10AO60312 1499 aa25.44■■□□□ 1.66
TSR1-202ENST00000571806 ZNF518AQ6AHZ1 1483 aa25.43■■□□□ 1.66
TSR1-202ENST00000571806 LMTK3Q96Q04 1460 aa25.43■■□□□ 1.66
TSR1-202ENST00000571806 ARHGAP5Q13017 1502 aa25.42■■□□□ 1.66
TSR1-202ENST00000571806 CCDC18Q5T9S5 1454 aa25.41■■□□□ 1.66
TSR1-202ENST00000571806 C9orf84Q5VXU9 1444 aa25.41■■□□□ 1.66
TSR1-202ENST00000571806 SIGLEC1Q9BZZ2 1709 aa25.4■■□□□ 1.66
TSR1-202ENST00000571806 CASKIN1Q8WXD9 1431 aa25.39■■□□□ 1.66
TSR1-202ENST00000571806 LRRIQ1Q96JM4 1722 aa25.38■■□□□ 1.65
TSR1-202ENST00000571806 MLECQ14165 292 aa25.37■■□□□ 1.65
TSR1-202ENST00000571806 FER1L4A9Z1Z3 1794 aa25.36■■□□□ 1.65
TSR1-202ENST00000571806 KDM5CP41229 1560 aa25.35■■□□□ 1.65
TSR1-202ENST00000571806 FBXO41Q8TF61 875 aa25.35■■□□□ 1.65
TSR1-202ENST00000571806 ARHGEF12Q9NZN5 1544 aa25.33■■□□□ 1.65
TSR1-202ENST00000571806 AFAP1Q8N556 730 aa25.33■■□□□ 1.65
TSR1-202ENST00000571806 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
TSR1-202ENST00000571806 PLPPR3Q6T4P5 718 aa25.3■■□□□ 1.64
TSR1-202ENST00000571806 MYT1LQ9UL68 1186 aa25.3■■□□□ 1.64
TSR1-202ENST00000571806 PREX2Q70Z35 1606 aa25.3■■□□□ 1.64
TSR1-202ENST00000571806 FYCO1Q9BQS8 1478 aa25.29■■□□□ 1.64
TSR1-202ENST00000571806 MLH3Q9UHC1 1453 aa25.28■■□□□ 1.64
TSR1-202ENST00000571806 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
TSR1-202ENST00000571806 HSPA2P54652 639 aa25.25■■□□□ 1.63
TSR1-202ENST00000571806 DIP2CQ9Y2E4 1556 aa25.23■■□□□ 1.63
TSR1-202ENST00000571806 ABCC1P33527 1531 aa25.23■■□□□ 1.63
TSR1-202ENST00000571806 PREX1Q8TCU6 1659 aa25.2■■□□□ 1.62
TSR1-202ENST00000571806 ITSN2Q9NZM3 1697 aa25.2■■□□□ 1.62
TSR1-202ENST00000571806 CDC42BPAQ5VT25 1732 aa25.19■■□□□ 1.62
TSR1-202ENST00000571806 TRAPPC8Q9Y2L5 1435 aa25.19■■□□□ 1.62
TSR1-202ENST00000571806 AGLP35573 1532 aa25.18■■□□□ 1.62
TSR1-202ENST00000571806 ABCA6Q8N139 1617 aa25.17■■□□□ 1.62
TSR1-202ENST00000571806 ESF1Q9H501 851 aaKnown RBP25.16■■□□□ 1.62
TSR1-202ENST00000571806 CEBPAP49715 358 aaPredicted RBP25.15■■□□□ 1.62
TSR1-202ENST00000571806 SETD1BQ9UPS6 1966 aaKnown RBP25.14■■□□□ 1.62
TSR1-202ENST00000571806 DMRT2Q9Y5R5 561 aa25.12■■□□□ 1.61
TSR1-202ENST00000571806 GPATCH8Q9UKJ3 1502 aaKnown RBP25.12■■□□□ 1.61
TSR1-202ENST00000571806 UHRF1BP1Q6BDS2 1440 aa25.12■■□□□ 1.61
TSR1-202ENST00000571806 KIDINS220Q9ULH0 1771 aa25.11■■□□□ 1.61
TSR1-202ENST00000571806 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
TSR1-202ENST00000571806 PLEKHH2Q8IVE3 1493 aa25.09■■□□□ 1.61
TSR1-202ENST00000571806 CNTLNQ9NXG0 1405 aa25.09■■□□□ 1.61
TSR1-202ENST00000571806 SAMD9LQ8IVG5 1584 aa25.09■■□□□ 1.61
TSR1-202ENST00000571806 KIAA1107Q9UPP5 1409 aa25.08■■□□□ 1.61
TSR1-202ENST00000571806 CFDP1Q9UEE9 299 aaPredicted RBP25.07■■□□□ 1.6
TSR1-202ENST00000571806 C3P01024 1663 aa25.06■■□□□ 1.6
TSR1-202ENST00000571806 SPAG9O60271 1321 aaKnown RBP25.06■■□□□ 1.6
TSR1-202ENST00000571806 MTUS2Q5JR59 1369 aa25.05■■□□□ 1.6
TSR1-202ENST00000571806 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
TSR1-202ENST00000571806 CERKQ8TCT0 537 aa25.05■■□□□ 1.6
TSR1-202ENST00000571806 SYCP2Q9BX26 1530 aa25.05■■□□□ 1.6
TSR1-202ENST00000571806 HNRNPMP52272 730 aaKnown RBP eCLIP25.03■■□□□ 1.6
TSR1-202ENST00000571806 STRCQ7RTU9 1775 aa24.98■■□□□ 1.59
TSR1-202ENST00000571806 ATP7AQ04656 1500 aa24.98■■□□□ 1.59
TSR1-202ENST00000571806 MROH2AA6NES4 1674 aa24.97■■□□□ 1.59
TSR1-202ENST00000571806 NPATQ14207 1427 aa24.95■■□□□ 1.59
TSR1-202ENST00000571806 INO80Q9ULG1 1556 aaPredicted RBP24.95■■□□□ 1.58
TSR1-202ENST00000571806 EHBP1L1Q8N3D4 1523 aa24.94■■□□□ 1.58
TSR1-202ENST00000571806 PTPRTO14522 1441 aa24.94■■□□□ 1.58
TSR1-202ENST00000571806 SUPT6HQ7KZ85 1726 aaKnown RBP24.93■■□□□ 1.58
TSR1-202ENST00000571806 PPP6R1Q9UPN7 881 aa24.93■■□□□ 1.58
TSR1-202ENST00000571806 A2MP01023 1474 aa24.93■■□□□ 1.58
TSR1-202ENST00000571806 ZMYM3Q14202 1370 aa24.93■■□□□ 1.58
TSR1-202ENST00000571806 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
TSR1-202ENST00000571806 CEP162Q5TB80 1403 aa24.91■■□□□ 1.58
TSR1-202ENST00000571806 TIAM1Q13009 1591 aa24.89■■□□□ 1.58
TSR1-202ENST00000571806 ADGBQ8N7X0 1667 aa24.88■■□□□ 1.57
TSR1-202ENST00000571806 RTEL1-TNFRSF6BF6WH68 1400 aa24.87■■□□□ 1.57
TSR1-202ENST00000571806 MBD5Q9P267 1494 aa24.85■■□□□ 1.57
TSR1-202ENST00000571806 RSPH4AQ5TD94 716 aa24.85■■□□□ 1.57
TSR1-202ENST00000571806 GGT6Q6P531 493 aa24.84■■□□□ 1.57
TSR1-202ENST00000571806 NCOA1Q15788 1441 aa24.84■■□□□ 1.57
TSR1-202ENST00000571806 ZNF644Q9H582 1327 aaPredicted RBP24.84■■□□□ 1.57
TSR1-202ENST00000571806 CLTCQ00610 1675 aaKnown RBP24.83■■□□□ 1.57
TSR1-202ENST00000571806 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
TSR1-202ENST00000571806 DHX29Q7Z478 1369 aaKnown RBP24.79■■□□□ 1.56
TSR1-202ENST00000571806 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
TSR1-202ENST00000571806 NCOA2Q15596 1464 aa24.77■■□□□ 1.56
TSR1-202ENST00000571806 CCDC141Q6ZP82 1450 aa24.76■■□□□ 1.55
TSR1-202ENST00000571806 ZNF142P52746 1687 aaPredicted RBP24.75■■□□□ 1.55
TSR1-202ENST00000571806 PKD2Q13563 968 aa24.75■■□□□ 1.55
TSR1-202ENST00000571806 IQSEC2Q5JU85 1478 aa24.75■■□□□ 1.55
TSR1-202ENST00000571806 PLA2R1Q13018 1463 aa24.74■■□□□ 1.55
TSR1-202ENST00000571806 MYO3AQ8NEV4 1616 aa24.74■■□□□ 1.55
TSR1-202ENST00000571806 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
TSR1-202ENST00000571806 FAM135AQ9P2D6 1515 aa24.72■■□□□ 1.55
TSR1-202ENST00000571806 CAMSAP2Q08AD1 1489 aa24.72■■□□□ 1.55
TSR1-202ENST00000571806 CEP170BQ9Y4F5 1589 aaPredicted RBP24.71■■□□□ 1.55
TSR1-202ENST00000571806 TSPY4P0CV99 314 aa24.69■■□□□ 1.54
TSR1-202ENST00000571806 TSPY10P0CW01 314 aa24.69■■□□□ 1.54
TSR1-202ENST00000571806 KIF3BO15066 747 aa24.68■■□□□ 1.54
TSR1-202ENST00000571806 VPS8Q8N3P4 1428 aa24.68■■□□□ 1.54
TSR1-202ENST00000571806 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
TSR1-202ENST00000571806 NCKAP5LQ9HCH0 1330 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms