RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 APLP2Q06481 763 aa13.67□□□□□ -0.22
TRAPPC1-203ENST00000571739 CFDP1Q9UEE9 299 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC1-203ENST00000571739 ZNF777Q9ULD5 760 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC1-203ENST00000571739 CCNB3Q8WWL7 1395 aa13.67□□□□□ -0.22
TRAPPC1-203ENST00000571739 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC1-203ENST00000571739 ARHGAP5Q13017 1502 aa13.66□□□□□ -0.22
TRAPPC1-203ENST00000571739 EHBP1L1Q8N3D4 1523 aa13.66□□□□□ -0.22
TRAPPC1-203ENST00000571739 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
TRAPPC1-203ENST00000571739 ADGRL1O94910 1474 aa13.65□□□□□ -0.22
TRAPPC1-203ENST00000571739 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC1-203ENST00000571739 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
TRAPPC1-203ENST00000571739 NCOA2Q15596 1464 aa13.64□□□□□ -0.23
TRAPPC1-203ENST00000571739 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
TRAPPC1-203ENST00000571739 FRMPD1Q5SYB0 1578 aa13.63□□□□□ -0.23
TRAPPC1-203ENST00000571739 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAPPC1-203ENST00000571739 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
TRAPPC1-203ENST00000571739 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
TRAPPC1-203ENST00000571739 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
TRAPPC1-203ENST00000571739 TRAPPC8Q9Y2L5 1435 aa13.61□□□□□ -0.23
TRAPPC1-203ENST00000571739 RICTORQ6R327 1708 aa13.61□□□□□ -0.23
TRAPPC1-203ENST00000571739 POGZQ7Z3K3 1410 aa13.6□□□□□ -0.23
TRAPPC1-203ENST00000571739 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
TRAPPC1-203ENST00000571739 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.23
TRAPPC1-203ENST00000571739 YEATS2Q9ULM3 1422 aa13.57□□□□□ -0.24
TRAPPC1-203ENST00000571739 KIAA1107Q9UPP5 1409 aa13.57□□□□□ -0.24
TRAPPC1-203ENST00000571739 ABCC1P33527 1531 aa13.56□□□□□ -0.24
TRAPPC1-203ENST00000571739 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
TRAPPC1-203ENST00000571739 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
TRAPPC1-203ENST00000571739 ZMYM4Q5VZL5 1548 aa13.55□□□□□ -0.24
TRAPPC1-203ENST00000571739 MAGI2Q86UL8 1455 aa13.55□□□□□ -0.24
TRAPPC1-203ENST00000571739 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
TRAPPC1-203ENST00000571739 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
TRAPPC1-203ENST00000571739 KDM5CP41229 1560 aa13.54□□□□□ -0.24
TRAPPC1-203ENST00000571739 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
TRAPPC1-203ENST00000571739 PLEKHH2Q8IVE3 1493 aa13.53□□□□□ -0.24
TRAPPC1-203ENST00000571739 MLH3Q9UHC1 1453 aa13.53□□□□□ -0.24
TRAPPC1-203ENST00000571739 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
TRAPPC1-203ENST00000571739 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
TRAPPC1-203ENST00000571739 RSPH4AQ5TD94 716 aa13.52□□□□□ -0.25
TRAPPC1-203ENST00000571739 MIA2Q96PC5 1412 aa13.51□□□□□ -0.25
TRAPPC1-203ENST00000571739 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
TRAPPC1-203ENST00000571739 ZFYVE16Q7Z3T8 1539 aa13.5□□□□□ -0.25
TRAPPC1-203ENST00000571739 ATP10AO60312 1499 aa13.5□□□□□ -0.25
TRAPPC1-203ENST00000571739 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
TRAPPC1-203ENST00000571739 ARID4BQ4LE39 1312 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC1-203ENST00000571739 ARHGEF40Q8TER5 1519 aa13.48□□□□□ -0.25
TRAPPC1-203ENST00000571739 KIDINS220Q9ULH0 1771 aa13.48□□□□□ -0.25
TRAPPC1-203ENST00000571739 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
TRAPPC1-203ENST00000571739 HECW2Q9P2P5 1572 aa13.46□□□□□ -0.25
TRAPPC1-203ENST00000571739 TSPY4P0CV99 314 aa13.46□□□□□ -0.25
TRAPPC1-203ENST00000571739 TSPY10P0CW01 314 aa13.46□□□□□ -0.25
TRAPPC1-203ENST00000571739 MLECQ14165 292 aa13.46□□□□□ -0.25
TRAPPC1-203ENST00000571739 AEBP2Q6ZN18 517 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC1-203ENST00000571739 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.26
TRAPPC1-203ENST00000571739 RTEL1-TNFRSF6BF6WH68 1400 aa13.45□□□□□ -0.26
TRAPPC1-203ENST00000571739 C9orf84Q5VXU9 1444 aa13.45□□□□□ -0.26
TRAPPC1-203ENST00000571739 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
TRAPPC1-203ENST00000571739 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
TRAPPC1-203ENST00000571739 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
TRAPPC1-203ENST00000571739 ABCA6Q8N139 1617 aa13.43□□□□□ -0.26
TRAPPC1-203ENST00000571739 ATP7AQ04656 1500 aa13.43□□□□□ -0.26
TRAPPC1-203ENST00000571739 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
TRAPPC1-203ENST00000571739 ABCC5O15440 1437 aa13.42□□□□□ -0.26
TRAPPC1-203ENST00000571739 PTPN23Q9H3S7 1636 aa13.42□□□□□ -0.26
TRAPPC1-203ENST00000571739 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-203ENST00000571739 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC1-203ENST00000571739 ADAMTSL3P82987 1691 aa13.4□□□□□ -0.26
TRAPPC1-203ENST00000571739 BCORL1Q5H9F3 1711 aa13.4□□□□□ -0.26
TRAPPC1-203ENST00000571739 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
TRAPPC1-203ENST00000571739 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
TRAPPC1-203ENST00000571739 A2MP01023 1474 aa13.39□□□□□ -0.27
TRAPPC1-203ENST00000571739 AGLP35573 1532 aa13.39□□□□□ -0.27
TRAPPC1-203ENST00000571739 CHIC2Q9UKJ5 165 aa13.38□□□□□ -0.27
TRAPPC1-203ENST00000571739 DAPK1P53355 1430 aa13.38□□□□□ -0.27
TRAPPC1-203ENST00000571739 GGT6Q6P531 493 aa13.36□□□□□ -0.27
TRAPPC1-203ENST00000571739 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
TRAPPC1-203ENST00000571739 PTPRMP28827 1452 aa13.36□□□□□ -0.27
TRAPPC1-203ENST00000571739 KIF3BO15066 747 aa13.35□□□□□ -0.27
TRAPPC1-203ENST00000571739 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC1-203ENST00000571739 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
TRAPPC1-203ENST00000571739 MAST1Q9Y2H9 1570 aa13.35□□□□□ -0.27
TRAPPC1-203ENST00000571739 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
TRAPPC1-203ENST00000571739 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
TRAPPC1-203ENST00000571739 DNMT1P26358 1616 aaKnown RBP13.33□□□□□ -0.28
TRAPPC1-203ENST00000571739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAPPC1-203ENST00000571739 NCOA1Q15788 1441 aa13.32□□□□□ -0.28
TRAPPC1-203ENST00000571739 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
TRAPPC1-203ENST00000571739 PLPPR3Q6T4P5 718 aa13.32□□□□□ -0.28
TRAPPC1-203ENST00000571739 RRBP1Q9P2E9 1410 aaKnown RBP13.31□□□□□ -0.28
TRAPPC1-203ENST00000571739 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
TRAPPC1-203ENST00000571739 ITGAEP38570 1179 aa13.31□□□□□ -0.28
TRAPPC1-203ENST00000571739 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
TRAPPC1-203ENST00000571739 RIMS1Q86UR5 1692 aaKnown RBP13.3□□□□□ -0.28
TRAPPC1-203ENST00000571739 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
TRAPPC1-203ENST00000571739 ANKRD30AQ9BXX3 1397 aa13.29□□□□□ -0.28
TRAPPC1-203ENST00000571739 CROCC2H7BZ55 1655 aa13.28□□□□□ -0.28
TRAPPC1-203ENST00000571739 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
TRAPPC1-203ENST00000571739 ZMYM3Q14202 1370 aa13.28□□□□□ -0.28
TRAPPC1-203ENST00000571739 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.29
TRAPPC1-203ENST00000571739 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms