RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 MYO5CQ9NQX4 1742 aa18.04■□□□□ 0.48
CDRT1-206ENST00000571263 RSPH4AQ5TD94 716 aa18.04■□□□□ 0.48
CDRT1-206ENST00000571263 PREX2Q70Z35 1606 aa18.04■□□□□ 0.48
CDRT1-206ENST00000571263 TTC37Q6PGP7 1564 aa18.04■□□□□ 0.48
CDRT1-206ENST00000571263 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
CDRT1-206ENST00000571263 CD109Q6YHK3 1445 aa18■□□□□ 0.47
CDRT1-206ENST00000571263 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
CDRT1-206ENST00000571263 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
CDRT1-206ENST00000571263 CDC42BPBQ9Y5S2 1711 aa17.98■□□□□ 0.47
CDRT1-206ENST00000571263 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
CDRT1-206ENST00000571263 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
CDRT1-206ENST00000571263 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
CDRT1-206ENST00000571263 CAMSAP2Q08AD1 1489 aa17.96■□□□□ 0.47
CDRT1-206ENST00000571263 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
CDRT1-206ENST00000571263 FANCAO15360 1455 aa17.94■□□□□ 0.46
CDRT1-206ENST00000571263 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
CDRT1-206ENST00000571263 ZNF644Q9H582 1327 aaPredicted RBP17.93■□□□□ 0.46
CDRT1-206ENST00000571263 NEO1Q92859 1461 aa17.92■□□□□ 0.46
CDRT1-206ENST00000571263 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
CDRT1-206ENST00000571263 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
CDRT1-206ENST00000571263 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
CDRT1-206ENST00000571263 SAMD9LQ8IVG5 1584 aa17.91■□□□□ 0.46
CDRT1-206ENST00000571263 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
CDRT1-206ENST00000571263 DAPK1P53355 1430 aa17.9■□□□□ 0.46
CDRT1-206ENST00000571263 TEX14Q8IWB6 1497 aa17.9■□□□□ 0.46
CDRT1-206ENST00000571263 ITGAEP38570 1179 aa17.9■□□□□ 0.46
CDRT1-206ENST00000571263 ACIN1Q9UKV3 1341 aaKnown RBP17.89■□□□□ 0.45
CDRT1-206ENST00000571263 AKNAQ7Z591 1439 aa17.89■□□□□ 0.45
CDRT1-206ENST00000571263 ABCC5O15440 1437 aa17.88■□□□□ 0.45
CDRT1-206ENST00000571263 MBD5Q9P267 1494 aa17.88■□□□□ 0.45
CDRT1-206ENST00000571263 HNRNPMP52272 730 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDRT1-206ENST00000571263 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
CDRT1-206ENST00000571263 CCDC141Q6ZP82 1450 aa17.87■□□□□ 0.45
CDRT1-206ENST00000571263 SHANK2Q9UPX8 1470 aa17.87■□□□□ 0.45
CDRT1-206ENST00000571263 ABCC1P33527 1531 aa17.86■□□□□ 0.45
CDRT1-206ENST00000571263 ADGRL1O94910 1474 aa17.85■□□□□ 0.45
CDRT1-206ENST00000571263 SCAPERQ9BY12 1400 aa17.84■□□□□ 0.45
CDRT1-206ENST00000571263 HRCP23327 699 aa17.84■□□□□ 0.45
CDRT1-206ENST00000571263 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
CDRT1-206ENST00000571263 SYCP2Q9BX26 1530 aa17.83■□□□□ 0.45
CDRT1-206ENST00000571263 PTPRKQ15262 1439 aa17.81■□□□□ 0.44
CDRT1-206ENST00000571263 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
CDRT1-206ENST00000571263 RTEL1-TNFRSF6BF6WH68 1400 aa17.81■□□□□ 0.44
CDRT1-206ENST00000571263 CROCC2H7BZ55 1655 aa17.8■□□□□ 0.44
CDRT1-206ENST00000571263 MAST1Q9Y2H9 1570 aa17.8■□□□□ 0.44
CDRT1-206ENST00000571263 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
CDRT1-206ENST00000571263 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
CDRT1-206ENST00000571263 HFM1A2PYH4 1435 aa17.8■□□□□ 0.44
CDRT1-206ENST00000571263 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
CDRT1-206ENST00000571263 ARHGEF12Q9NZN5 1544 aa17.79■□□□□ 0.44
CDRT1-206ENST00000571263 ZNF518AQ6AHZ1 1483 aa17.79■□□□□ 0.44
CDRT1-206ENST00000571263 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
CDRT1-206ENST00000571263 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
CDRT1-206ENST00000571263 CHIC2Q9UKJ5 165 aa17.78■□□□□ 0.44
CDRT1-206ENST00000571263 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
CDRT1-206ENST00000571263 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.43
CDRT1-206ENST00000571263 SPAG9O60271 1321 aaKnown RBP17.76■□□□□ 0.43
CDRT1-206ENST00000571263 TRAPPC8Q9Y2L5 1435 aa17.76■□□□□ 0.43
CDRT1-206ENST00000571263 AFAP1Q8N556 730 aa17.75■□□□□ 0.43
CDRT1-206ENST00000571263 PPRC1Q5VV67 1664 aaKnown RBP17.74■□□□□ 0.43
CDRT1-206ENST00000571263 NAIPQ13075 1403 aa17.74■□□□□ 0.43
CDRT1-206ENST00000571263 POGZQ7Z3K3 1410 aa17.74■□□□□ 0.43
CDRT1-206ENST00000571263 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
CDRT1-206ENST00000571263 TSPOAP1O95153 1857 aa17.73■□□□□ 0.43
CDRT1-206ENST00000571263 MLH3Q9UHC1 1453 aa17.71■□□□□ 0.43
CDRT1-206ENST00000571263 GCC2Q8IWJ2 1684 aa17.71■□□□□ 0.42
CDRT1-206ENST00000571263 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
CDRT1-206ENST00000571263 KDM5CP41229 1560 aa17.7■□□□□ 0.42
CDRT1-206ENST00000571263 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
CDRT1-206ENST00000571263 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
CDRT1-206ENST00000571263 MAGI2Q86UL8 1455 aa17.69■□□□□ 0.42
CDRT1-206ENST00000571263 KIF15Q9NS87 1388 aa17.68■□□□□ 0.42
CDRT1-206ENST00000571263 ATP7AQ04656 1500 aa17.67■□□□□ 0.42
CDRT1-206ENST00000571263 DUOX2Q9NRD8 1548 aa17.67■□□□□ 0.42
CDRT1-206ENST00000571263 INO80Q9ULG1 1556 aaPredicted RBP17.67■□□□□ 0.42
CDRT1-206ENST00000571263 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
CDRT1-206ENST00000571263 ZFYVE16Q7Z3T8 1539 aa17.67■□□□□ 0.42
CDRT1-206ENST00000571263 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
CDRT1-206ENST00000571263 RICTORQ6R327 1708 aa17.65■□□□□ 0.42
CDRT1-206ENST00000571263 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
CDRT1-206ENST00000571263 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
CDRT1-206ENST00000571263 ERBINQ96RT1 1412 aa17.64■□□□□ 0.41
CDRT1-206ENST00000571263 DHX29Q7Z478 1369 aaKnown RBP17.62■□□□□ 0.41
CDRT1-206ENST00000571263 KIDINS220Q9ULH0 1771 aa17.61■□□□□ 0.41
CDRT1-206ENST00000571263 FRMPD1Q5SYB0 1578 aa17.58■□□□□ 0.41
CDRT1-206ENST00000571263 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.4
CDRT1-206ENST00000571263 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.4
CDRT1-206ENST00000571263 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
CDRT1-206ENST00000571263 A2MP01023 1474 aa17.57■□□□□ 0.4
CDRT1-206ENST00000571263 COL17A1Q9UMD9 1497 aaPredicted RBP17.56■□□□□ 0.4
CDRT1-206ENST00000571263 EIF2AK4Q9P2K8 1649 aaKnown RBP17.56■□□□□ 0.4
CDRT1-206ENST00000571263 ATP10AO60312 1499 aa17.55■□□□□ 0.4
CDRT1-206ENST00000571263 KDM6BO15054 1643 aa17.54■□□□□ 0.4
CDRT1-206ENST00000571263 DHX57Q6P158 1386 aaKnown RBP17.53■□□□□ 0.4
CDRT1-206ENST00000571263 REREQ9P2R6 1566 aa17.53■□□□□ 0.4
CDRT1-206ENST00000571263 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
CDRT1-206ENST00000571263 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
CDRT1-206ENST00000571263 NUP155O75694 1391 aa17.51■□□□□ 0.39
CDRT1-206ENST00000571263 KANK1Q14678 1352 aa17.51■□□□□ 0.39
CDRT1-206ENST00000571263 KIF3BO15066 747 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms