RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 MAP3K4Q9Y6R4 1608 aa25.84■■□□□ 1.73
RPAIN-208ENST00000571043 CDC42BPBQ9Y5S2 1711 aa25.84■■□□□ 1.73
RPAIN-208ENST00000571043 ITSN2Q9NZM3 1697 aa25.83■■□□□ 1.72
RPAIN-208ENST00000571043 CFDP1Q9UEE9 299 aaPredicted RBP25.82■■□□□ 1.72
RPAIN-208ENST00000571043 MIA2Q96PC5 1412 aa25.81■■□□□ 1.72
RPAIN-208ENST00000571043 PREX2Q70Z35 1606 aa25.81■■□□□ 1.72
RPAIN-208ENST00000571043 ARAP3Q8WWN8 1544 aa25.8■■□□□ 1.72
RPAIN-208ENST00000571043 FGD6Q6ZV73 1430 aa25.78■■□□□ 1.72
RPAIN-208ENST00000571043 TRHP20396 242 aaPredicted RBP25.78■■□□□ 1.72
RPAIN-208ENST00000571043 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
RPAIN-208ENST00000571043 ARHGAP5Q13017 1502 aa25.74■■□□□ 1.71
RPAIN-208ENST00000571043 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
RPAIN-208ENST00000571043 TSPOAP1O95153 1857 aa25.74■■□□□ 1.71
RPAIN-208ENST00000571043 ZNF777Q9ULD5 760 aaPredicted RBP25.72■■□□□ 1.71
RPAIN-208ENST00000571043 FANCAO15360 1455 aa25.71■■□□□ 1.71
RPAIN-208ENST00000571043 ZNF644Q9H582 1327 aaPredicted RBP25.71■■□□□ 1.71
RPAIN-208ENST00000571043 CLSPNQ9HAW4 1339 aa25.71■■□□□ 1.71
RPAIN-208ENST00000571043 PPRC1Q5VV67 1664 aaKnown RBP25.7■■□□□ 1.71
RPAIN-208ENST00000571043 PTPN23Q9H3S7 1636 aa25.7■■□□□ 1.7
RPAIN-208ENST00000571043 ITGAEP38570 1179 aa25.7■■□□□ 1.7
RPAIN-208ENST00000571043 TCOF1Q13428 1488 aaKnown RBP25.69■■□□□ 1.7
RPAIN-208ENST00000571043 SAMD9LQ8IVG5 1584 aa25.66■■□□□ 1.7
RPAIN-208ENST00000571043 DHX57Q6P158 1386 aaKnown RBP25.66■■□□□ 1.7
RPAIN-208ENST00000571043 NEO1Q92859 1461 aa25.66■■□□□ 1.7
RPAIN-208ENST00000571043 CAMSAP2Q08AD1 1489 aa25.65■■□□□ 1.7
RPAIN-208ENST00000571043 TEX14Q8IWB6 1497 aa25.65■■□□□ 1.7
RPAIN-208ENST00000571043 CFAP74Q9C0B2 1584 aa25.64■■□□□ 1.7
RPAIN-208ENST00000571043 AKNAQ7Z591 1439 aa25.64■■□□□ 1.7
RPAIN-208ENST00000571043 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.69
RPAIN-208ENST00000571043 KIAA1107Q9UPP5 1409 aa25.63■■□□□ 1.69
RPAIN-208ENST00000571043 PLEKHH2Q8IVE3 1493 aa25.62■■□□□ 1.69
RPAIN-208ENST00000571043 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
RPAIN-208ENST00000571043 HNRNPMP52272 730 aaKnown RBP eCLIP25.59■■□□□ 1.69
RPAIN-208ENST00000571043 RSPH4AQ5TD94 716 aa25.58■■□□□ 1.69
RPAIN-208ENST00000571043 ABCC1P33527 1531 aa25.58■■□□□ 1.69
RPAIN-208ENST00000571043 MBD5Q9P267 1494 aa25.58■■□□□ 1.69
RPAIN-208ENST00000571043 ADGRL1O94910 1474 aa25.58■■□□□ 1.68
RPAIN-208ENST00000571043 ARHGEF12Q9NZN5 1544 aa25.57■■□□□ 1.68
RPAIN-208ENST00000571043 SCAPERQ9BY12 1400 aa25.56■■□□□ 1.68
RPAIN-208ENST00000571043 SYCP2Q9BX26 1530 aa25.55■■□□□ 1.68
RPAIN-208ENST00000571043 ARHGEF5Q12774 1597 aa25.54■■□□□ 1.68
RPAIN-208ENST00000571043 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
RPAIN-208ENST00000571043 ABCC5O15440 1437 aa25.51■■□□□ 1.67
RPAIN-208ENST00000571043 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
RPAIN-208ENST00000571043 DAPK1P53355 1430 aa25.49■■□□□ 1.67
RPAIN-208ENST00000571043 AFAP1Q8N556 730 aa25.48■■□□□ 1.67
RPAIN-208ENST00000571043 DENND4BO75064 1496 aaPredicted RBP25.48■■□□□ 1.67
RPAIN-208ENST00000571043 CCDC141Q6ZP82 1450 aa25.48■■□□□ 1.67
RPAIN-208ENST00000571043 PTPRKQ15262 1439 aa25.47■■□□□ 1.67
RPAIN-208ENST00000571043 TSPY4P0CV99 314 aa25.47■■□□□ 1.67
RPAIN-208ENST00000571043 TSPY10P0CW01 314 aa25.47■■□□□ 1.67
RPAIN-208ENST00000571043 HFM1A2PYH4 1435 aa25.46■■□□□ 1.67
RPAIN-208ENST00000571043 RAPGEF3O95398 923 aa25.45■■□□□ 1.66
RPAIN-208ENST00000571043 POGZQ7Z3K3 1410 aa25.45■■□□□ 1.66
RPAIN-208ENST00000571043 ZNF518AQ6AHZ1 1483 aa25.45■■□□□ 1.66
RPAIN-208ENST00000571043 COL17A1Q9UMD9 1497 aaPredicted RBP25.45■■□□□ 1.66
RPAIN-208ENST00000571043 RICTORQ6R327 1708 aa25.43■■□□□ 1.66
RPAIN-208ENST00000571043 CROCC2H7BZ55 1655 aa25.42■■□□□ 1.66
RPAIN-208ENST00000571043 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
RPAIN-208ENST00000571043 KDM5CP41229 1560 aa25.39■■□□□ 1.66
RPAIN-208ENST00000571043 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.66
RPAIN-208ENST00000571043 SPAG9O60271 1321 aaKnown RBP25.38■■□□□ 1.65
RPAIN-208ENST00000571043 C9orf84Q5VXU9 1444 aa25.38■■□□□ 1.65
RPAIN-208ENST00000571043 MAST1Q9Y2H9 1570 aa25.38■■□□□ 1.65
RPAIN-208ENST00000571043 FRMPD1Q5SYB0 1578 aa25.37■■□□□ 1.65
RPAIN-208ENST00000571043 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
RPAIN-208ENST00000571043 NAIPQ13075 1403 aa25.37■■□□□ 1.65
RPAIN-208ENST00000571043 MLH3Q9UHC1 1453 aa25.35■■□□□ 1.65
RPAIN-208ENST00000571043 ROCK1Q13464 1354 aa25.34■■□□□ 1.65
RPAIN-208ENST00000571043 NCOA1Q15788 1441 aa25.34■■□□□ 1.65
RPAIN-208ENST00000571043 KDM6BO15054 1643 aa25.33■■□□□ 1.65
RPAIN-208ENST00000571043 ADGRL2O95490 1459 aa25.33■■□□□ 1.65
RPAIN-208ENST00000571043 ZMYM4Q5VZL5 1548 aa25.32■■□□□ 1.64
RPAIN-208ENST00000571043 KIDINS220Q9ULH0 1771 aa25.31■■□□□ 1.64
RPAIN-208ENST00000571043 ANKRD30AQ9BXX3 1397 aa25.31■■□□□ 1.64
RPAIN-208ENST00000571043 ADGBQ8N7X0 1667 aa25.31■■□□□ 1.64
RPAIN-208ENST00000571043 INO80Q9ULG1 1556 aaPredicted RBP25.31■■□□□ 1.64
RPAIN-208ENST00000571043 ATP7AQ04656 1500 aa25.3■■□□□ 1.64
RPAIN-208ENST00000571043 ZFYVE16Q7Z3T8 1539 aa25.3■■□□□ 1.64
RPAIN-208ENST00000571043 MAGI2Q86UL8 1455 aa25.29■■□□□ 1.64
RPAIN-208ENST00000571043 HECW2Q9P2P5 1572 aa25.29■■□□□ 1.64
RPAIN-208ENST00000571043 MYT1LQ9UL68 1186 aa25.29■■□□□ 1.64
RPAIN-208ENST00000571043 RRP7BPQ9NSQ0 103 aa25.28■■□□□ 1.64
RPAIN-208ENST00000571043 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
RPAIN-208ENST00000571043 ACIN1Q9UKV3 1341 aaKnown RBP25.25■■□□□ 1.63
RPAIN-208ENST00000571043 ZNF316A6NFI3 1004 aaPredicted RBP25.23■■□□□ 1.63
RPAIN-208ENST00000571043 KIF15Q9NS87 1388 aa25.23■■□□□ 1.63
RPAIN-208ENST00000571043 YEATS2Q9ULM3 1422 aa25.21■■□□□ 1.63
RPAIN-208ENST00000571043 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
RPAIN-208ENST00000571043 GCC2Q8IWJ2 1684 aa25.19■■□□□ 1.62
RPAIN-208ENST00000571043 DUOX2Q9NRD8 1548 aa25.18■■□□□ 1.62
RPAIN-208ENST00000571043 DIP2CQ9Y2E4 1556 aa25.18■■□□□ 1.62
RPAIN-208ENST00000571043 TIMELESSQ9UNS1 1208 aa25.17■■□□□ 1.62
RPAIN-208ENST00000571043 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
RPAIN-208ENST00000571043 ATP10AO60312 1499 aa25.16■■□□□ 1.62
RPAIN-208ENST00000571043 ANKRD50Q9ULJ7 1429 aa25.15■■□□□ 1.62
RPAIN-208ENST00000571043 A2MP01023 1474 aa25.14■■□□□ 1.62
RPAIN-208ENST00000571043 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
RPAIN-208ENST00000571043 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
RPAIN-208ENST00000571043 REREQ9P2R6 1566 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms