RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 EHBP1L1Q8N3D4 1523 aa21.45■■□□□ 1.02
RPAIN-207ENST00000570883 ZMYM4Q5VZL5 1548 aa21.44■■□□□ 1.02
RPAIN-207ENST00000570883 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
RPAIN-207ENST00000570883 ARHGEF40Q8TER5 1519 aa21.41■■□□□ 1.02
RPAIN-207ENST00000570883 POGZQ7Z3K3 1410 aa21.41■■□□□ 1.02
RPAIN-207ENST00000570883 MTUS2Q5JR59 1369 aa21.41■■□□□ 1.02
RPAIN-207ENST00000570883 SCAPERQ9BY12 1400 aa21.4■■□□□ 1.02
RPAIN-207ENST00000570883 EFCAB2Q5VUJ9 269 aa21.4■■□□□ 1.02
RPAIN-207ENST00000570883 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.01
RPAIN-207ENST00000570883 ABCC1P33527 1531 aa21.39■■□□□ 1.01
RPAIN-207ENST00000570883 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
RPAIN-207ENST00000570883 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
RPAIN-207ENST00000570883 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
RPAIN-207ENST00000570883 SUPT6HQ7KZ85 1726 aaKnown RBP21.36■■□□□ 1.01
RPAIN-207ENST00000570883 KDM5CP41229 1560 aa21.35■■□□□ 1.01
RPAIN-207ENST00000570883 SIGLEC1Q9BZZ2 1709 aa21.34■■□□□ 1.01
RPAIN-207ENST00000570883 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
RPAIN-207ENST00000570883 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
RPAIN-207ENST00000570883 YEATS2Q9ULM3 1422 aa21.32■■□□□ 1
RPAIN-207ENST00000570883 MAP3K1Q13233 1512 aa21.32■■□□□ 1
RPAIN-207ENST00000570883 ZNF518AQ6AHZ1 1483 aa21.32■■□□□ 1
RPAIN-207ENST00000570883 LRRC9Q6ZRR7 1453 aa21.31■■□□□ 1
RPAIN-207ENST00000570883 MAGI2Q86UL8 1455 aa21.31■■□□□ 1
RPAIN-207ENST00000570883 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
RPAIN-207ENST00000570883 CCNB3Q8WWL7 1395 aa21.3■■□□□ 1
RPAIN-207ENST00000570883 NCOA2Q15596 1464 aa21.3■■□□□ 1
RPAIN-207ENST00000570883 HECW2Q9P2P5 1572 aa21.29■■□□□ 1
RPAIN-207ENST00000570883 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
RPAIN-207ENST00000570883 TRAPPC8Q9Y2L5 1435 aa21.28■■□□□ 1
RPAIN-207ENST00000570883 BCORL1Q5H9F3 1711 aa21.26■□□□□ 0.99
RPAIN-207ENST00000570883 ADAMTSL3P82987 1691 aa21.26■□□□□ 0.99
RPAIN-207ENST00000570883 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
RPAIN-207ENST00000570883 KIDINS220Q9ULH0 1771 aa21.24■□□□□ 0.99
RPAIN-207ENST00000570883 AFAP1Q8N556 730 aa21.24■□□□□ 0.99
RPAIN-207ENST00000570883 DIP2CQ9Y2E4 1556 aa21.23■□□□□ 0.99
RPAIN-207ENST00000570883 KANK4Q5T7N3 995 aaPredicted RBP21.23■□□□□ 0.99
RPAIN-207ENST00000570883 CFDP1Q9UEE9 299 aaPredicted RBP21.22■□□□□ 0.99
RPAIN-207ENST00000570883 ZNF777Q9ULD5 760 aaPredicted RBP21.22■□□□□ 0.99
RPAIN-207ENST00000570883 MLH3Q9UHC1 1453 aa21.21■□□□□ 0.99
RPAIN-207ENST00000570883 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
RPAIN-207ENST00000570883 KIAA1107Q9UPP5 1409 aa21.2■□□□□ 0.98
RPAIN-207ENST00000570883 MADDQ8WXG6 1647 aa21.19■□□□□ 0.98
RPAIN-207ENST00000570883 ATP10AO60312 1499 aa21.19■□□□□ 0.98
RPAIN-207ENST00000570883 C9orf84Q5VXU9 1444 aa21.18■□□□□ 0.98
RPAIN-207ENST00000570883 INO80Q9ULG1 1556 aaPredicted RBP21.18■□□□□ 0.98
RPAIN-207ENST00000570883 ZNF644Q9H582 1327 aaPredicted RBP21.17■□□□□ 0.98
RPAIN-207ENST00000570883 REREQ9P2R6 1566 aa21.17■□□□□ 0.98
RPAIN-207ENST00000570883 CAMSAP2Q08AD1 1489 aa21.16■□□□□ 0.98
RPAIN-207ENST00000570883 HNRNPMP52272 730 aaKnown RBP eCLIP21.15■□□□□ 0.98
RPAIN-207ENST00000570883 MBD5Q9P267 1494 aa21.14■□□□□ 0.98
RPAIN-207ENST00000570883 ARID4BQ4LE39 1312 aaPredicted RBP21.14■□□□□ 0.97
RPAIN-207ENST00000570883 ATP7AQ04656 1500 aa21.14■□□□□ 0.97
RPAIN-207ENST00000570883 RIMS1Q86UR5 1692 aaKnown RBP21.13■□□□□ 0.97
RPAIN-207ENST00000570883 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
RPAIN-207ENST00000570883 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
RPAIN-207ENST00000570883 PTPRMP28827 1452 aa21.08■□□□□ 0.97
RPAIN-207ENST00000570883 APLP2Q06481 763 aa21.08■□□□□ 0.97
RPAIN-207ENST00000570883 ARHGEF5Q12774 1597 aa21.08■□□□□ 0.97
RPAIN-207ENST00000570883 MYT1LQ9UL68 1186 aa21.08■□□□□ 0.97
RPAIN-207ENST00000570883 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
RPAIN-207ENST00000570883 AGLP35573 1532 aa21.07■□□□□ 0.96
RPAIN-207ENST00000570883 CCDC141Q6ZP82 1450 aa21.07■□□□□ 0.96
RPAIN-207ENST00000570883 ADGBQ8N7X0 1667 aa21.06■□□□□ 0.96
RPAIN-207ENST00000570883 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
RPAIN-207ENST00000570883 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
RPAIN-207ENST00000570883 PTPN23Q9H3S7 1636 aa21.02■□□□□ 0.96
RPAIN-207ENST00000570883 MLECQ14165 292 aa21.01■□□□□ 0.95
RPAIN-207ENST00000570883 RTEL1-TNFRSF6BF6WH68 1400 aa21■□□□□ 0.95
RPAIN-207ENST00000570883 CROCC2H7BZ55 1655 aa20.99■□□□□ 0.95
RPAIN-207ENST00000570883 A2MP01023 1474 aa20.99■□□□□ 0.95
RPAIN-207ENST00000570883 MAST1Q9Y2H9 1570 aa20.98■□□□□ 0.95
RPAIN-207ENST00000570883 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
RPAIN-207ENST00000570883 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
RPAIN-207ENST00000570883 RSPH4AQ5TD94 716 aa20.94■□□□□ 0.94
RPAIN-207ENST00000570883 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
RPAIN-207ENST00000570883 C3P01024 1663 aa20.92■□□□□ 0.94
RPAIN-207ENST00000570883 MROH2AA6NES4 1674 aa20.89■□□□□ 0.94
RPAIN-207ENST00000570883 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
RPAIN-207ENST00000570883 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
RPAIN-207ENST00000570883 ABCC5O15440 1437 aa20.87■□□□□ 0.93
RPAIN-207ENST00000570883 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
RPAIN-207ENST00000570883 TSPY4P0CV99 314 aa20.86■□□□□ 0.93
RPAIN-207ENST00000570883 TSPY10P0CW01 314 aa20.86■□□□□ 0.93
RPAIN-207ENST00000570883 DAPK1P53355 1430 aa20.86■□□□□ 0.93
RPAIN-207ENST00000570883 LMTK3Q96Q04 1460 aa20.85■□□□□ 0.93
RPAIN-207ENST00000570883 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
RPAIN-207ENST00000570883 PREX1Q8TCU6 1659 aa20.83■□□□□ 0.93
RPAIN-207ENST00000570883 CNTLNQ9NXG0 1405 aa20.83■□□□□ 0.93
RPAIN-207ENST00000570883 SETD1BQ9UPS6 1966 aaKnown RBP20.83■□□□□ 0.92
RPAIN-207ENST00000570883 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
RPAIN-207ENST00000570883 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
RPAIN-207ENST00000570883 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
RPAIN-207ENST00000570883 PPARGC1BQ86YN6 1023 aaKnown RBP20.8■□□□□ 0.92
RPAIN-207ENST00000570883 DUOX2Q9NRD8 1548 aa20.78■□□□□ 0.92
RPAIN-207ENST00000570883 GGT6Q6P531 493 aa20.78■□□□□ 0.92
RPAIN-207ENST00000570883 MROH1Q8NDA8 1641 aa20.78■□□□□ 0.92
RPAIN-207ENST00000570883 KIF15Q9NS87 1388 aa20.76■□□□□ 0.91
RPAIN-207ENST00000570883 KIF3BO15066 747 aa20.76■□□□□ 0.91
RPAIN-207ENST00000570883 ESF1Q9H501 851 aaKnown RBP20.76■□□□□ 0.91
RPAIN-207ENST00000570883 KDM5DQ9BY66 1539 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms